Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yjjK [C]

Identifier: 91789373

GI number: 91789373

Start: 3721199

End: 3722860

Strand: Reverse

Name: yjjK [C]

Synonym: Bpro_3519

Alternate gene names: 91789373

Gene position: 3722860-3721199 (Counterclockwise)

Preceding gene: 91789376

Following gene: 91789372

Centisome position: 71.59

GC content: 61.73

Gene sequence:

>1662_bases
ATGGCCCAGTACGTATTTACCATGAACAAGGTCGGCAAAATCGTGCCGCCCAAGCGTCAAATTCTCAAAGAGGTTTCGCT
CAGCTTTTTCCCTGGCGCCAAGATTGGCGTGCTGGGCACCAACGGCTCCGGCAAGTCCACGCTGCTCAAGATCATGGCTG
GCCTGGACACCGAGATAGAAGGCGAAGCCACCCCCATGCCGGGGCTGAACATCGGCTACCTGCCGCAGGAGCCCAAGCTC
GACCCTGGGCACACGGTGCGCGAGAGTGTCGAGGCCGGCATGGGGGCGGTATTTGCCGCCAAGGCCCAGCTCGAAGCGGT
GTACACCGCCTACGGCGAGCCCGATGCCGACTTTGACGCCCTGGCCGCCGAGCAGGCTCGCCTGGAAGCCATCATCGCGA
CCTCGGGCACGGATTCCGAGCACCAGCTCGAGATCGCCGCCGACGCGCTGCGCCTGCCGCCCTGGGACGCCCAGATCAGT
GTTCTGTCGGGTGGCGAAAAACGCCGCGTGGCCTTGTGCAGCCTGCTGCTGTCCAAGCCCGACATGCTGCTGCTCGACGA
GCCGACCAACCACCTGGACGCCGAATCGGTGGACTGGCTGGAGCAGTTTCTGCAGCGCTATTCGGGTACGGTGGTTGCCA
TCACCCATGACCGTTACTTCCTGGACAACGCGGCCGAGTGGATTCTGGAACTGGACCGCGGCCATGGCATCCCCTGGAAA
GGCAACTACAGCAGCTGGCTGGATCAAAAAGGCGAGCGTCTGGCCCAGGAGCAAAAGGGCGAAGAGGCCCGTGCCAAGGC
TCTGAAAAAGGAACTGGAGTGGTCACGCCAGAACCCGAAAGCGCGACAGGCCAAGAGCAAGTCGCGTCTGGCACGTTTTG
AAGAGCTGTCTGATTTTGAATACCAGAAACGCGTGGAGACCAACGAGATTTTCATCCCGGTGGCCGAGCGTCTGGGCAAT
GAGGTCATTGAGTTCAAGGGCGTCAGCAAGTCCTTCGGCGACCGCCTGTTGATCGACAACCTGAGCTTCAAGGTGCCGGC
CGGCGCCATCGTCGGCATCATCGGCCCCAACGGCGCGGGCAAGTCCACGTTGTTCAAGCTGATTGCCGGCAAAGAGCAGC
CGGACAGCGGCGAAGTGGTGATTGGCAAGACAGCGCGCATGGCTTTTGTGGACCAGCACCGTGATGACCTGGCCAACGAA
AAAACCGTCTGGGAAGATATCTCGGGCGGCCTCGACCTGCTCACCGTCGGCAAATTCACCATGCCCAGCCGCGCGTATGC
GGGCCGCTTCAACTTCAACGGCGCCGACCAGCAAAAACGCGTCGGCATGCTGTCGGGCGGCGAGCGCGGGCGCCTGCACC
TGGCCAAGACACTGATTGCTGGCGGCAACGTGTTGATGCTTGACGAACCGTCCAATGACCTCGACGTGGAAACCCTGCGC
GCGCTCGAAGACGCACTGCTCGAATTCGCCGGCTCCGTCATGGTCATCAGCCACGACCGCTGGTTCCTTGACCGCATTGC
CACGCACATCCTTGCGGCCGAAGGCGACAGCCAGTGGACCTTCTTCAACGGCAACTACCAGGAATACGAAGCCGACAAGA
AGAAGCGCCTGGGTGAAGAAGGCGCCAAGCCGAAGCGCGTGCGCTTCAAGGCATTGCATTAA

Upstream 100 bases:

>100_bases
CTGCAGATGACTCTGCAAAAAGCCTGTAAAAATAGCAGCTACAGGCCGTGTGCAGCCCGTTTTCTTGCATTGTTTTTCAT
TTTTACCAAAGTTGATCCTG

Downstream 100 bases:

>100_bases
GTTCTCGCGGTCGCTCTACTGGAGCGCAGCAGCCCACTCCTTCTCCCTCTGGGAGAAGGTCGGGATGAGGGCTGGCGGCG
TGTGATGTTGCACTGTGCTT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MAQYVFTMNKVGKIVPPKRQILKEVSLSFFPGAKIGVLGTNGSGKSTLLKIMAGLDTEIEGEATPMPGLNIGYLPQEPKL
DPGHTVRESVEAGMGAVFAAKAQLEAVYTAYGEPDADFDALAAEQARLEAIIATSGTDSEHQLEIAADALRLPPWDAQIS
VLSGGEKRRVALCSLLLSKPDMLLLDEPTNHLDAESVDWLEQFLQRYSGTVVAITHDRYFLDNAAEWILELDRGHGIPWK
GNYSSWLDQKGERLAQEQKGEEARAKALKKELEWSRQNPKARQAKSKSRLARFEELSDFEYQKRVETNEIFIPVAERLGN
EVIEFKGVSKSFGDRLLIDNLSFKVPAGAIVGIIGPNGAGKSTLFKLIAGKEQPDSGEVVIGKTARMAFVDQHRDDLANE
KTVWEDISGGLDLLTVGKFTMPSRAYAGRFNFNGADQQKRVGMLSGGERGRLHLAKTLIAGGNVLMLDEPSNDLDVETLR
ALEDALLEFAGSVMVISHDRWFLDRIATHILAAEGDSQWTFFNGNYQEYEADKKKRLGEEGAKPKRVRFKALH

Sequences:

>Translated_553_residues
MAQYVFTMNKVGKIVPPKRQILKEVSLSFFPGAKIGVLGTNGSGKSTLLKIMAGLDTEIEGEATPMPGLNIGYLPQEPKL
DPGHTVRESVEAGMGAVFAAKAQLEAVYTAYGEPDADFDALAAEQARLEAIIATSGTDSEHQLEIAADALRLPPWDAQIS
VLSGGEKRRVALCSLLLSKPDMLLLDEPTNHLDAESVDWLEQFLQRYSGTVVAITHDRYFLDNAAEWILELDRGHGIPWK
GNYSSWLDQKGERLAQEQKGEEARAKALKKELEWSRQNPKARQAKSKSRLARFEELSDFEYQKRVETNEIFIPVAERLGN
EVIEFKGVSKSFGDRLLIDNLSFKVPAGAIVGIIGPNGAGKSTLFKLIAGKEQPDSGEVVIGKTARMAFVDQHRDDLANE
KTVWEDISGGLDLLTVGKFTMPSRAYAGRFNFNGADQQKRVGMLSGGERGRLHLAKTLIAGGNVLMLDEPSNDLDVETLR
ALEDALLEFAGSVMVISHDRWFLDRIATHILAAEGDSQWTFFNGNYQEYEADKKKRLGEEGAKPKRVRFKALH
>Mature_552_residues
AQYVFTMNKVGKIVPPKRQILKEVSLSFFPGAKIGVLGTNGSGKSTLLKIMAGLDTEIEGEATPMPGLNIGYLPQEPKLD
PGHTVRESVEAGMGAVFAAKAQLEAVYTAYGEPDADFDALAAEQARLEAIIATSGTDSEHQLEIAADALRLPPWDAQISV
LSGGEKRRVALCSLLLSKPDMLLLDEPTNHLDAESVDWLEQFLQRYSGTVVAITHDRYFLDNAAEWILELDRGHGIPWKG
NYSSWLDQKGERLAQEQKGEEARAKALKKELEWSRQNPKARQAKSKSRLARFEELSDFEYQKRVETNEIFIPVAERLGNE
VIEFKGVSKSFGDRLLIDNLSFKVPAGAIVGIIGPNGAGKSTLFKLIAGKEQPDSGEVVIGKTARMAFVDQHRDDLANEK
TVWEDISGGLDLLTVGKFTMPSRAYAGRFNFNGADQQKRVGMLSGGERGRLHLAKTLIAGGNVLMLDEPSNDLDVETLRA
LEDALLEFAGSVMVISHDRWFLDRIATHILAAEGDSQWTFFNGNYQEYEADKKKRLGEEGAKPKRVRFKALH

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=27.2556390977444, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=28.6238532110092, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=28.6238532110092, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI10947135, Length=555, Percent_Identity=27.9279279279279, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI69354671, Length=555, Percent_Identity=27.9279279279279, Blast_Score=160, Evalue=4e-39,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=68.1735985533454, Blast_Score=787, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=515, Percent_Identity=33.9805825242718, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI1789751, Length=548, Percent_Identity=32.4817518248175, Blast_Score=248, Evalue=8e-67,
Organism=Escherichia coli, GI1787041, Length=516, Percent_Identity=31.0077519379845, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI87081782, Length=576, Percent_Identity=25.3472222222222, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=29.6875, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI48994943, Length=487, Percent_Identity=24.6406570841889, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787164, Length=191, Percent_Identity=30.8900523560209, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=32.9787234042553, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788761, Length=196, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=28.2296650717703, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787712, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788225, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786345, Length=222, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790467, Length=165, Percent_Identity=29.6969696969697, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=24.7524752475248, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790739, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=28.6290322580645, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=26.8421052631579, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=26.8867924528302, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786703, Length=213, Percent_Identity=30.9859154929577, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787370, Length=192, Percent_Identity=25, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=235, Percent_Identity=25.1063829787234, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789991, Length=198, Percent_Identity=29.2929292929293, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=25.9615384615385, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788053, Length=201, Percent_Identity=28.8557213930348, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=561, Percent_Identity=27.2727272727273, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=549, Percent_Identity=30.7832422586521, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17555318, Length=571, Percent_Identity=26.6199649737303, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17569145, Length=264, Percent_Identity=29.9242424242424, Blast_Score=72, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=29.4227188081937, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6321121, Length=526, Percent_Identity=25.8555133079848, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6323278, Length=373, Percent_Identity=26.2734584450402, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=374, Percent_Identity=26.4705882352941, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=397, Percent_Identity=26.7002518891688, Blast_Score=106, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=376, Percent_Identity=26.063829787234, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323959, Length=232, Percent_Identity=28.448275862069, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=28.2527881040892, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24642252, Length=552, Percent_Identity=27.8985507246377, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI18859989, Length=552, Percent_Identity=27.8985507246377, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24641342, Length=549, Percent_Identity=28.5974499089253, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24666092, Length=201, Percent_Identity=30.3482587064677, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221512771, Length=184, Percent_Identity=29.8913043478261, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28574259, Length=195, Percent_Identity=27.1794871794872, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61042; Mature: 60911

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYVFTMNKVGKIVPPKRQILKEVSLSFFPGAKIGVLGTNGSGKSTLLKIMAGLDTEIE
CCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCC
GEATPMPGLNIGYLPQEPKLDPGHTVRESVEAGMGAVFAAKAQLEAVYTAYGEPDADFDA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHEEECCCCCCCHHH
LAAEQARLEAIIATSGTDSEHQLEIAADALRLPPWDAQISVLSGGEKRRVALCSLLLSKP
HHHHHHHEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCC
DMLLLDEPTNHLDAESVDWLEQFLQRYSGTVVAITHDRYFLDNAAEWILELDRGHGIPWK
CEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
GNYSSWLDQKGERLAQEQKGEEARAKALKKELEWSRQNPKARQAKSKSRLARFEELSDFE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
YQKRVETNEIFIPVAERLGNEVIEFKGVSKSFGDRLLIDNLSFKVPAGAIVGIIGPNGAG
HHHCCCCCEEEEEHHHHCCCCEEEECCCCHHHCCEEEEECCCEECCCCEEEEEECCCCCC
KSTLFKLIAGKEQPDSGEVVIGKTARMAFVDQHRDDLANEKTVWEDISGGLDLLTVGKFT
HHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCC
MPSRAYAGRFNFNGADQQKRVGMLSGGERGRLHLAKTLIAGGNVLMLDEPSNDLDVETLR
CCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHCCCCEEEEECCCCCCCHHHHH
ALEDALLEFAGSVMVISHDRWFLDRIATHILAAEGDSQWTFFNGNYQEYEADKKKRLGEE
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHC
GAKPKRVRFKALH
CCCCCEEEEEECC
>Mature Secondary Structure 
AQYVFTMNKVGKIVPPKRQILKEVSLSFFPGAKIGVLGTNGSGKSTLLKIMAGLDTEIE
CCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCC
GEATPMPGLNIGYLPQEPKLDPGHTVRESVEAGMGAVFAAKAQLEAVYTAYGEPDADFDA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHEEECCCCCCCHHH
LAAEQARLEAIIATSGTDSEHQLEIAADALRLPPWDAQISVLSGGEKRRVALCSLLLSKP
HHHHHHHEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCC
DMLLLDEPTNHLDAESVDWLEQFLQRYSGTVVAITHDRYFLDNAAEWILELDRGHGIPWK
CEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
GNYSSWLDQKGERLAQEQKGEEARAKALKKELEWSRQNPKARQAKSKSRLARFEELSDFE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
YQKRVETNEIFIPVAERLGNEVIEFKGVSKSFGDRLLIDNLSFKVPAGAIVGIIGPNGAG
HHHCCCCCEEEEEHHHHCCCCEEEECCCCHHHCCEEEEECCCEECCCCEEEEEECCCCCC
KSTLFKLIAGKEQPDSGEVVIGKTARMAFVDQHRDDLANEKTVWEDISGGLDLLTVGKFT
HHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCC
MPSRAYAGRFNFNGADQQKRVGMLSGGERGRLHLAKTLIAGGNVLMLDEPSNDLDVETLR
CCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHCCCCEEEEECCCCCCCHHHHH
ALEDALLEFAGSVMVISHDRWFLDRIATHILAAEGDSQWTFFNGNYQEYEADKKKRLGEE
HHHHHHHHHCCCEEEEECCHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHC
GAKPKRVRFKALH
CCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]