Click here to switch to the map view.

The map label for this gene is zntR [H]

Identifier: 91789333

GI number: 91789333

Start: 3680643

End: 3681113

Strand: Reverse

Name: zntR [H]

Synonym: Bpro_3479

Alternate gene names: 91789333

Gene position: 3681113-3680643 (Counterclockwise)

Preceding gene: 91789334

Following gene: 91789324

Centisome position: 70.79

GC content: 64.54

Gene sequence:

>471_bases
ATGCGCACTGACAGTGCGATCCCGGCACCGTACCGCATCAGCGAGGCGGCCGCCCTGAGCGGCGTGTCCGCTGCCAACAT
CCGGTTTTATGAAAAGGAAATGCTCCTGAGTCCGCATGGGAGAAGCGAAAACAGCTATCGTTGTTACAGCCTTGGCGATG
TGCACCAGCTGCGCTTCATCCGCCTGTGCCGCGCCATGGACATGTCACTGGACGAAGTGCGCACGTTGCTGGGACTGGAC
CTCAACCTCAAGACCGATTGCGCCACGGCGCGGGAGTCGCTCGACGGGCACCTGGCCCATGTGCGCGCGCGCCTGGCGGA
ACTCAAGGCCCTTGAAAAAGACCTGAAGGCCTTGCGCGACCGCTGCGATGGCACCGACGCGCACTGCCACATCATCGAGG
CGCTGCACGAGCGGGCCGATGCCCTGCCGGTGCCGGTCAAGCGCCCCGAAGCCGTCAAGCGGCACGTCTGA

Upstream 100 bases:

>100_bases
GGGCAGCATTCGCATCGTCACCGCCACGAGCCCATGACCCACAGCCATGCGCATTACCCCGATGCCCACCACCGTCATGA
CCACCGAAAGGAGTAGCGAC

Downstream 100 bases:

>100_bases
TGCTGAAGCGGTTGAAGCGCCTGAAGAGCTTCAGCTTTTTTGAAGCTGCCATTGCGCCTTGTCAATCCACAGCTGCAGGC
TGTCCAGCAGATCCTGCTGG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Zn(II)-responsive regulator of zntA [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRTDSAIPAPYRISEAAALSGVSAANIRFYEKEMLLSPHGRSENSYRCYSLGDVHQLRFIRLCRAMDMSLDEVRTLLGLD
LNLKTDCATARESLDGHLAHVRARLAELKALEKDLKALRDRCDGTDAHCHIIEALHERADALPVPVKRPEAVKRHV

Sequences:

>Translated_156_residues
MRTDSAIPAPYRISEAAALSGVSAANIRFYEKEMLLSPHGRSENSYRCYSLGDVHQLRFIRLCRAMDMSLDEVRTLLGLD
LNLKTDCATARESLDGHLAHVRARLAELKALEKDLKALRDRCDGTDAHCHIIEALHERADALPVPVKRPEAVKRHV
>Mature_156_residues
MRTDSAIPAPYRISEAAALSGVSAANIRFYEKEMLLSPHGRSENSYRCYSLGDVHQLRFIRLCRAMDMSLDEVRTLLGLD
LNLKTDCATARESLDGHLAHVRARLAELKALEKDLKALRDRCDGTDAHCHIIEALHERADALPVPVKRPEAVKRHV

Specific function: Zinc-responsive transcriptional regulator of zntA [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=136, Percent_Identity=33.8235294117647, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1786695, Length=124, Percent_Identity=33.0645161290323, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- InterPro:   IPR011788 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17498; Mature: 17498

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDSAIPAPYRISEAAALSGVSAANIRFYEKEMLLSPHGRSENSYRCYSLGDVHQLRFI
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
RLCRAMDMSLDEVRTLLGLDLNLKTDCATARESLDGHLAHVRARLAELKALEKDLKALRD
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCDGTDAHCHIIEALHERADALPVPVKRPEAVKRHV
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MRTDSAIPAPYRISEAAALSGVSAANIRFYEKEMLLSPHGRSENSYRCYSLGDVHQLRFI
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
RLCRAMDMSLDEVRTLLGLDLNLKTDCATARESLDGHLAHVRARLAELKALEKDLKALRD
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCDGTDAHCHIIEALHERADALPVPVKRPEAVKRHV
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]