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The map label for this gene is yckA [H]

Identifier: 91789329

GI number: 91789329

Start: 3677478

End: 3678128

Strand: Direct

Name: yckA [H]

Synonym: Bpro_3474

Alternate gene names: 91789329

Gene position: 3677478-3678128 (Clockwise)

Preceding gene: 91789328

Following gene: 91789330

Centisome position: 70.72

GC content: 58.83

Gene sequence:

>651_bases
ATGGTTGAATTTTCCGTCTGGGACATTTTTCGCAACCTTTTGCTGGCCGCGCGCTGGACGGTGGTGCTGTCACTGATCGC
CTTTGTCGGCGGCGGCATTGTTGGCCTGCTCTTGCTGGTGGCCCGGCTTTCCAAATTACGCGGCATGAACACGCTGGTCG
GTGGCTATGTGCAGCTGTTTCAGGGCACGCCGCTGTTGATGCAACTTTTTCTGGCTTACTTCGGCCTTGCGCTGTTTGGC
ATCAAGACCTCTGCCTGGGTTGCCGCGTCGGTCGCGCTCACGCTGTACACCAGCGCTTTTCTGACCGAAATCTGGCGCGG
CTGTGTGGCGGCTATTCCCAAGGGGCAATGGGAGGCGGGCCAAAGCCTGGCGCTGAGTTTTCGCGAGCTGCTGCAGCATG
TGGTGGTGCCGCAGGCCCTCAAAATCGCCATCCCACCCACCGTCGGTTTTCTGGTGCAGGTAGTGAAGGGCACCGCGCTG
GCCTCGGTGATCGGTTTCATCGAGTTGACCAAGGCCGGCACCATGATCACCAATGCGACCTTCAAGCCCTTTGTGGTCTA
CAGCTGTGTGGCGCTGCTCTACTTTGCGCTGTGTTTTCCGGTGTCGCTGTATGCCCGCCGGCTCGAAAGGAAATTGAGGA
ATGGACGTTAA

Upstream 100 bases:

>100_bases
AGATAAATAAATATGCCCCCACACTTACTCACTACGTGTAGTTCGCTGCCCCCCGAGGGGTCGCAGGCCTGCTTGGGGCG
GCCCGGCGCGAGGCCTGACC

Downstream 100 bases:

>100_bases
AGAGGAAACCAATCAGACCGCTCACCAATTTTCCGACGGGCCGCCCCAAGGAAAATTAGCCCCCGAGGGGCTGACGTCCG
CGGCTCCAAGCCTGCCTGCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNTLVGGYVQLFQGTPLLMQLFLAYFGLALFG
IKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTAL
ASVIGFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR

Sequences:

>Translated_216_residues
MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNTLVGGYVQLFQGTPLLMQLFLAYFGLALFG
IKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTAL
ASVIGFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR
>Mature_216_residues
MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNTLVGGYVQLFQGTPLLMQLFLAYFGLALFG
IKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTAL
ASVIGFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=33.0143540669856, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=32.2274881516588, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=32.0388349514563, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=29.4685990338164, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787086, Length=170, Percent_Identity=31.7647058823529, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI48994930, Length=127, Percent_Identity=36.2204724409449, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1786874, Length=207, Percent_Identity=25.1207729468599, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788646, Length=197, Percent_Identity=26.3959390862944, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=25.5506607929515, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23605; Mature: 23605

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNTLVGGYVQLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QGTPLLMQLFLAYFGLALFGIKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKGQWEAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTALASVIGFIELTKAGTMITNAT
HHHHHHHHHHHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
FKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNTLVGGYVQLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QGTPLLMQLFLAYFGLALFGIKTSAWVAASVALTLYTSAFLTEIWRGCVAAIPKGQWEAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTALASVIGFIELTKAGTMITNAT
HHHHHHHHHHHHHHHCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
FKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377 [H]