Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789299

Identifier: 91789299

GI number: 91789299

Start: 3646716

End: 3647333

Strand: Direct

Name: 91789299

Synonym: Bpro_3444

Alternate gene names: NA

Gene position: 3646716-3647333 (Clockwise)

Preceding gene: 91789296

Following gene: 91789300

Centisome position: 70.13

GC content: 58.09

Gene sequence:

>618_bases
ATGAACAAAGCGACCACTTATCCGGTTTCCGCCCGCGGCCCGGCCGACCATGACGTGCGAGATCAGATCGTTACCGCGGC
CACCGAGCACTTCAGCCGCTACGGTTACGAGAAAACGACCGTCTCCGACCTCGCCAAAGCCATCGGGTTTTCCAAGGCTT
ACATCTACAAGTTCTTTGAGTCCAAGCAGGCCATCGGCGAGATGATCTGCGCAAACTGCCTGCGCGAGATTGAGGCCGAG
GTCAGTGCGGCTATTGCAGGGGCCGACATGCCGCCAGAGAAATTGCGGCGGATGTTTAAAGCCATGACCGAGGCGAGCCT
TCGATTGTTTTTTCAGGACCGCAAGCTGTACGAGATTGCCGCCTCGGCCGCTACGGAGCGCTGGCAGGCGGTTCATGCCT
ACGAAGAACACATCCAGAAGCTGCTTCGGGACGTCTTGCAGGAAGGCCGGCAAACCGGGGACTTTGAGCGCAAGACACCC
TTGGACGAGACGGCGTTGGCCATCTATCTGGTCATGCGCCCCTACCTCAACCCTTTGCTCTTGCAACATAGCTTTGACTA
CAACAAAGAGGCGCCGGCGCATTTGTCGAGCCTGGTGCTTCGCAGCCTGTCACCATAA

Upstream 100 bases:

>100_bases
GCAGCATAGACTTGTTCCGAATCAGGTAGTCGATGAAGTGACTATAATACAATATGGTCACTCGTTGTTCATTTCTTTAG
ATGCAGGTAAGCTACAGACC

Downstream 100 bases:

>100_bases
ATAAAACTGTGACTATTGACTAATTTGGTCACAAGTACCATAATGAAAGTCCAATCATTTCGTCAATGGGACTTTCATGC
TCAGGCGTTACTTCGCTACA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE
VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP
LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP

Sequences:

>Translated_205_residues
MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE
VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP
LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP
>Mature_205_residues
MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEAE
VSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIAASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTP
LDETALAIYLVMRPYLNPLLLQHSFDYNKEAPAHLSSLVLRSLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23253; Mature: 23253

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
SKQAIGEMICANCLREIEAEVSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTPLDETALAIYLVMRPYLNPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LQHSFDYNKEAPAHLSSLVLRSLSP
HHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKATTYPVSARGPADHDVRDQIVTAATEHFSRYGYEKTTVSDLAKAIGFSKAYIYKFFE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
SKQAIGEMICANCLREIEAEVSAAIAGADMPPEKLRRMFKAMTEASLRLFFQDRKLYEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAATERWQAVHAYEEHIQKLLRDVLQEGRQTGDFERKTPLDETALAIYLVMRPYLNPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LQHSFDYNKEAPAHLSSLVLRSLSP
HHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA