| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is paaE [C]
Identifier: 91789289
GI number: 91789289
Start: 3635704
End: 3636036
Strand: Direct
Name: paaE [C]
Synonym: Bpro_3434
Alternate gene names: 91789289
Gene position: 3635704-3636036 (Clockwise)
Preceding gene: 91789286
Following gene: 91789291
Centisome position: 69.91
GC content: 66.37
Gene sequence:
>333_bases ATGTCTGTCAGCAGTCCGATAGCCCCCTCCCAAGCGGCGAGTCTCGCAAGCACTGTCGACACGGTGTTCAGGGCACGCAT TGGGCCGGCTGGCCCCGGCTTTGAGGCGCCCGCTTCGCTGTCCGTGTTGCAGGCCGCCCAGCTCGCAGGTGTGGAAATGG CCAGTTCGTGCCGCAATGGCACCTGCCGCACCTGCATTTGCGAGCTGACCAGCGGCGAGGTGGTGTACCGCATTGACTGG CCGGGACTGAGCGCCGAGGAGAAGCAGGCGGGCTACATCCTGCCCTGCGTGGCGTATCCGCTGTCGGATGTGGTGATCGC GCCGGCGGACTGA
Upstream 100 bases:
>100_bases ATCATCTTCCGCACCGCGGGGCCATCGCCTTCTGGGGTAAATTCAGACTTCCCATTCTCAATATGCCCCTTCCCCATAGC CCTCCCCATAGTCTTTACCC
Downstream 100 bases:
>100_bases GCGGCCGCGGCCTGCAGCGGACCCAAGGGTAGGCCCGCGGGCGACGAGGCGCCATCACCGAGCGCGCGTTGCATCAGCAC CGTGTCCACCCACTGGCCGA
Product: ferredoxin
Products: NA
Alternate protein names: 2Fe-2S Iron-Sulfur
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSVSSPIAPSQAASLASTVDTVFRARIGPAGPGFEAPASLSVLQAAQLAGVEMASSCRNGTCRTCICELTSGEVVYRIDW PGLSAEEKQAGYILPCVAYPLSDVVIAPAD
Sequences:
>Translated_110_residues MSVSSPIAPSQAASLASTVDTVFRARIGPAGPGFEAPASLSVLQAAQLAGVEMASSCRNGTCRTCICELTSGEVVYRIDW PGLSAEEKQAGYILPCVAYPLSDVVIAPAD >Mature_109_residues SVSSPIAPSQAASLASTVDTVFRARIGPAGPGFEAPASLSVLQAAQLAGVEMASSCRNGTCRTCICELTSGEVVYRIDWP GLSAEEKQAGYILPCVAYPLSDVVIAPAD
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 11289; Mature: 11158
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSPIAPSQAASLASTVDTVFRARIGPAGPGFEAPASLSVLQAAQLAGVEMASSCRNG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC TCRTCICELTSGEVVYRIDWPGLSAEEKQAGYILPCVAYPLSDVVIAPAD CCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCC >Mature Secondary Structure SVSSPIAPSQAASLASTVDTVFRARIGPAGPGFEAPASLSVLQAAQLAGVEMASSCRNG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC TCRTCICELTSGEVVYRIDWPGLSAEEKQAGYILPCVAYPLSDVVIAPAD CCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA