| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braF [H]
Identifier: 91789237
GI number: 91789237
Start: 3574480
End: 3575277
Strand: Reverse
Name: braF [H]
Synonym: Bpro_3381
Alternate gene names: 91789237
Gene position: 3575277-3574480 (Counterclockwise)
Preceding gene: 91789238
Following gene: 91789236
Centisome position: 68.75
GC content: 66.67
Gene sequence:
>798_bases ATGAGAACCGATCAGCCCCCTCCGACCGGTCAGGTCGATCAGACCGTGCTGTCGGCCAGCGGCCTGGTGATGCGCTTTGG CGGCATCACGGCCACCAACAACGTCACGCTGAACCTACAAAAGGGTGCGCGCCATGCGCTCATCGGCCCCAACGGCGCCG GCAAGACCACGCTGATCAACCTGCTGACGGGCGTGCTGCAACCCACCGAAGGGCGCATCACGCTGCTCGGGCAGGACATC ACCCAGCTGGCCCCCCACCAGCGCGTGCAGCGCGGCATGGTGCGCACGTTTCAGATCAACCAGTTGTTCGATTCGCTGAC GCCGCTGCAGACTTTGGCGCTGACGGTCTCGCAGCAGCGCGGCCTAGGTGCCCGCTGGTGGCAGTCGCTGGGCCGCAGCG ATGCGGTGGCCGCGCGCTGCGAGCAGCTGCTTGAGCAGTTCCACCTGCTAGAGGTGATGAACCAGCCCACCCGCGTGCTG GCCTACGGCAAGCGCCGCCTGCTGGAAATCGCGATTGCGCTGGCCTGCGAGCCGCGTGTGCTGCTGCTCGACGAGCCCGT GGCCGGTGTGCCGGCCGGCGAGCGCGAGGAACTGCTGCAAACCGTCGCGGCCCTGCCGGCCGACGTGTCGGTGCTGCTGA TCGAACACGACATGGACCTGGTGTTCAGCTTTGCCACGCGCATGACGGTGCTGGTCAATGGCACGGTGCTCACCGAAGGC GATCCGGAACAGATTGCGAACGACCCCGAAGTCAAGGCGGTGTACCTGGGCCACGGCGAGGAGGCTCACCATGACTGA
Upstream 100 bases:
>100_bases AGTACTGGACGTTCTGGATTGGCCTGTTCCTTGTGGTGCTGGTGCTGGTCGGGCGCGAGCGCCTGCTGCGGCCCTGGACC TGGTTCAGGAGGGCCAAGGC
Downstream 100 bases:
>100_bases ACTGCTGAAGGTCGAACAGCTGAGCGCCGGCTACGGCGAGGCGATTGTGCTCAACAACATTTCGCTGGCGCTGGACGAAG GCAAGACACTGGCGCTGCTG
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRTDQPPPTGQVDQTVLSASGLVMRFGGITATNNVTLNLQKGARHALIGPNGAGKTTLINLLTGVLQPTEGRITLLGQDI TQLAPHQRVQRGMVRTFQINQLFDSLTPLQTLALTVSQQRGLGARWWQSLGRSDAVAARCEQLLEQFHLLEVMNQPTRVL AYGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFATRMTVLVNGTVLTEG DPEQIANDPEVKAVYLGHGEEAHHD
Sequences:
>Translated_265_residues MRTDQPPPTGQVDQTVLSASGLVMRFGGITATNNVTLNLQKGARHALIGPNGAGKTTLINLLTGVLQPTEGRITLLGQDI TQLAPHQRVQRGMVRTFQINQLFDSLTPLQTLALTVSQQRGLGARWWQSLGRSDAVAARCEQLLEQFHLLEVMNQPTRVL AYGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFATRMTVLVNGTVLTEG DPEQIANDPEVKAVYLGHGEEAHHD >Mature_265_residues MRTDQPPPTGQVDQTVLSASGLVMRFGGITATNNVTLNLQKGARHALIGPNGAGKTTLINLLTGVLQPTEGRITLLGQDI TQLAPHQRVQRGMVRTFQINQLFDSLTPLQTLALTVSQQRGLGARWWQSLGRSDAVAARCEQLLEQFHLLEVMNQPTRVL AYGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFATRMTVLVNGTVLTEG DPEQIANDPEVKAVYLGHGEEAHHD
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=211, Percent_Identity=31.7535545023697, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=27.0642201834862, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=27.0642201834862, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=30, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI27436953, Length=214, Percent_Identity=24.7663551401869, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=28.2407407407407, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI150417984, Length=228, Percent_Identity=28.9473684210526, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=29.2237442922374, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI105990541, Length=220, Percent_Identity=27.7272727272727, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27262624, Length=208, Percent_Identity=24.5192307692308, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27262626, Length=208, Percent_Identity=24.5192307692308, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27477115, Length=212, Percent_Identity=25.9433962264151, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI6005701, Length=209, Percent_Identity=27.7511961722488, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI171184400, Length=218, Percent_Identity=27.5229357798165, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI25914749, Length=240, Percent_Identity=28.3333333333333, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1789864, Length=253, Percent_Identity=43.8735177865613, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI87081791, Length=246, Percent_Identity=29.6747967479675, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87081782, Length=245, Percent_Identity=31.4285714285714, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789593, Length=242, Percent_Identity=30.1652892561983, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=30.1255230125523, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1786319, Length=165, Percent_Identity=35.1515151515151, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI87081709, Length=239, Percent_Identity=28.8702928870293, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI48995001, Length=238, Percent_Identity=29.8319327731092, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790525, Length=240, Percent_Identity=26.25, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788210, Length=242, Percent_Identity=27.6859504132231, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI48994943, Length=242, Percent_Identity=28.5123966942149, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790190, Length=238, Percent_Identity=26.890756302521, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788897, Length=219, Percent_Identity=31.9634703196347, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87082268, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786253, Length=224, Percent_Identity=29.0178571428571, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787792, Length=240, Percent_Identity=26.25, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI145693107, Length=236, Percent_Identity=27.9661016949153, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787712, Length=231, Percent_Identity=27.7056277056277, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=26.3157894736842, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787089, Length=248, Percent_Identity=27.4193548387097, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786398, Length=229, Percent_Identity=31.0043668122271, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=26.3392857142857, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=24.8927038626609, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=28.1632653061224, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1787759, Length=251, Percent_Identity=27.8884462151394, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788472, Length=244, Percent_Identity=25.8196721311475, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=30.5555555555556, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789991, Length=238, Percent_Identity=28.1512605042017, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=24.7826086956522, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=25.3112033195021, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788450, Length=239, Percent_Identity=26.7782426778243, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789891, Length=237, Percent_Identity=29.535864978903, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789032, Length=238, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=23.0088495575221, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=26.9387755102041, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786563, Length=221, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082267, Length=217, Percent_Identity=24.8847926267281, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=24.7933884297521, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790162, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786345, Length=247, Percent_Identity=24.6963562753036, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787500, Length=225, Percent_Identity=23.1111111111111, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787548, Length=239, Percent_Identity=23.0125523012552, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787041, Length=246, Percent_Identity=26.8292682926829, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1789586, Length=224, Percent_Identity=25.4464285714286, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786975, Length=234, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994883, Length=239, Percent_Identity=23.8493723849372, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786872, Length=209, Percent_Identity=27.7511961722488, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788644, Length=260, Percent_Identity=25, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17510237, Length=222, Percent_Identity=31.5315315315315, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=29.5774647887324, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=29.5774647887324, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71983523, Length=213, Percent_Identity=29.5774647887324, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=28.7735849056604, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=27.4336283185841, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17551700, Length=253, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17551702, Length=253, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24666092, Length=232, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI116007184, Length=230, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI221500365, Length=230, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=28.310502283105, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI221512771, Length=224, Percent_Identity=27.6785714285714, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI28574150, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI116007328, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28573571, Length=242, Percent_Identity=26.4462809917355, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573573, Length=232, Percent_Identity=27.1551724137931, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28825; Mature: 28825
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDQPPPTGQVDQTVLSASGLVMRFGGITATNNVTLNLQKGARHALIGPNGAGKTTLIN CCCCCCCCCCCHHHHHHHHCCEEEEECCEEECCCEEEEECCCCCEEEECCCCCCHHHHHH LLTGVLQPTEGRITLLGQDITQLAPHQRVQRGMVRTFQINQLFDSLTPLQTLALTVSQQR HHHHHCCCCCCEEEEECCCHHHHCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCC GLGARWWQSLGRSDAVAARCEQLLEQFHLLEVMNQPTRVLAYGKRRLLEIAIALACEPRV CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE LLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFATRMTVLVNGTVLTEG EEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHEEEEEECEEEECC DPEQIANDPEVKAVYLGHGEEAHHD CHHHHCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRTDQPPPTGQVDQTVLSASGLVMRFGGITATNNVTLNLQKGARHALIGPNGAGKTTLIN CCCCCCCCCCCHHHHHHHHCCEEEEECCEEECCCEEEEECCCCCEEEECCCCCCHHHHHH LLTGVLQPTEGRITLLGQDITQLAPHQRVQRGMVRTFQINQLFDSLTPLQTLALTVSQQR HHHHHCCCCCCEEEEECCCHHHHCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCC GLGARWWQSLGRSDAVAARCEQLLEQFHLLEVMNQPTRVLAYGKRRLLEIAIALACEPRV CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE LLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFATRMTVLVNGTVLTEG EEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHEEEEEECEEEECC DPEQIANDPEVKAVYLGHGEEAHHD CHHHHCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]