| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livG [H]
Identifier: 91789189
GI number: 91789189
Start: 3527212
End: 3527994
Strand: Reverse
Name: livG [H]
Synonym: Bpro_3333
Alternate gene names: 91789189
Gene position: 3527994-3527212 (Counterclockwise)
Preceding gene: 91789190
Following gene: 91789188
Centisome position: 67.84
GC content: 56.07
Gene sequence:
>783_bases ATGGCCGGCCAGTCCCTGATCTCGGTTGACAGGCTGACCATGCGTTTTGGTGGCCTGACGGCGCTCGATGAACTGTCCAT GACTGTGCATGAGGGAGAAATACTTGGCCTGCTGGGTCCGAACGGCTCTGGCAAGACGACTTTCTTCAATGTGTTGACCG GGCTGTACAAAGCCAGCAGCGGCAGCATTTCCCTTGGCGGTGAAAACATTCTTGGCAAGACGCCGCAGCAGATTTACCGC AGTGGCGTCGCCCGTACCTTCCAGCGCTCCCGTCTTTCGCTGTCCCTCACGGTTTTCGACAACATTGTCATTGGCGATTA TCAGCACATGCAGCACGGTCTGATCTTCAATCTGTTGCGGCGCAAGGCGTTTCGGGCCGAGTACGAGGCTTACGTCGAGA AAGTGAAGTCCTTGCTGGAGATATTCAGCCCCCCGCTGGTCGGGCGGCTGTTCGAGCCGGTCGAAAGCTTCACGATGATA GACCGCCGACGCATCGAGGTTTGTCGCGCGCTGCTGAGTCGGCCGCGCTTGTTGCTTCTGGACGAACCATCCGCGGGCAT GACACATGATGAAACAGACGAGTTGATGCAGGATATCTTGCAGGTACGAGGAAAGCTGGACAAGCTCTCTGTCGTCCTGA TTGAGCATGAAATGAACGTGATCGAAAGAATCACTGACCGCTGCGTCGTCCTGAACTACGGCAAGAAGATCGCCGAAGGA AGCTATGTCGAGATCACAGCCGATCCACATGTGCAGACCGCTTATCTCGGAGAAGCCGCATGA
Upstream 100 bases:
>100_bases TCCTCTTGTATGCGGCGCTGGTGATTGTGATTTTGCTGTTTAGGTCGCAGGGGCTGCTGCCGCGCAAGACACGGATTTTC TTCGCCAGGAAGGGTTCATG
Downstream 100 bases:
>100_bases GCAAACTCAGTGTCAAGAATCTTACTACCGGCTTTGACAAGGTCAATGTCCTGCATGATGTGTCGATCGAGGTGGAGCCG GGCAAGATCACCTGCATTTT
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAGQSLISVDRLTMRFGGLTALDELSMTVHEGEILGLLGPNGSGKTTFFNVLTGLYKASSGSISLGGENILGKTPQQIYR SGVARTFQRSRLSLSLTVFDNIVIGDYQHMQHGLIFNLLRRKAFRAEYEAYVEKVKSLLEIFSPPLVGRLFEPVESFTMI DRRRIEVCRALLSRPRLLLLDEPSAGMTHDETDELMQDILQVRGKLDKLSVVLIEHEMNVIERITDRCVVLNYGKKIAEG SYVEITADPHVQTAYLGEAA
Sequences:
>Translated_260_residues MAGQSLISVDRLTMRFGGLTALDELSMTVHEGEILGLLGPNGSGKTTFFNVLTGLYKASSGSISLGGENILGKTPQQIYR SGVARTFQRSRLSLSLTVFDNIVIGDYQHMQHGLIFNLLRRKAFRAEYEAYVEKVKSLLEIFSPPLVGRLFEPVESFTMI DRRRIEVCRALLSRPRLLLLDEPSAGMTHDETDELMQDILQVRGKLDKLSVVLIEHEMNVIERITDRCVVLNYGKKIAEG SYVEITADPHVQTAYLGEAA >Mature_259_residues AGQSLISVDRLTMRFGGLTALDELSMTVHEGEILGLLGPNGSGKTTFFNVLTGLYKASSGSISLGGENILGKTPQQIYRS GVARTFQRSRLSLSLTVFDNIVIGDYQHMQHGLIFNLLRRKAFRAEYEAYVEKVKSLLEIFSPPLVGRLFEPVESFTMID RRRIEVCRALLSRPRLLLLDEPSAGMTHDETDELMQDILQVRGKLDKLSVVLIEHEMNVIERITDRCVVLNYGKKIAEGS YVEITADPHVQTAYLGEAA
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=239, Percent_Identity=25.1046025104602, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI47078218, Length=239, Percent_Identity=25.1046025104602, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27881501, Length=228, Percent_Identity=27.1929824561404, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI30795238, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI116734710, Length=250, Percent_Identity=26.4, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI105990541, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21536376, Length=242, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31657092, Length=234, Percent_Identity=24.3589743589744, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI6005701, Length=227, Percent_Identity=27.3127753303965, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789864, Length=256, Percent_Identity=39.0625, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI87082268, Length=252, Percent_Identity=30.1587301587302, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=30.7359307359307, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1787792, Length=241, Percent_Identity=28.2157676348548, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789593, Length=255, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1789991, Length=240, Percent_Identity=30.4166666666667, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787500, Length=233, Percent_Identity=29.1845493562232, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI48994943, Length=261, Percent_Identity=31.8007662835249, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1790525, Length=247, Percent_Identity=25.9109311740891, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790190, Length=249, Percent_Identity=26.5060240963855, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081709, Length=261, Percent_Identity=24.5210727969349, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=29.2576419213974, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87081791, Length=244, Percent_Identity=27.4590163934426, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788472, Length=247, Percent_Identity=25.9109311740891, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788165, Length=230, Percent_Identity=28.695652173913, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1790544, Length=248, Percent_Identity=27.4193548387097, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788897, Length=246, Percent_Identity=25.609756097561, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=25.2173913043478, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787370, Length=236, Percent_Identity=28.3898305084746, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=25.4464285714286, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786563, Length=237, Percent_Identity=27.4261603375527, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=30.8016877637131, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787029, Length=250, Percent_Identity=22.4, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87081782, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786253, Length=246, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994883, Length=257, Percent_Identity=24.9027237354086, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787759, Length=260, Percent_Identity=25.7692307692308, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790467, Length=243, Percent_Identity=24.2798353909465, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790162, Length=239, Percent_Identity=24.6861924686192, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789672, Length=257, Percent_Identity=22.568093385214, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=25.5605381165919, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789032, Length=258, Percent_Identity=24.8062015503876, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=23.6434108527132, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786803, Length=239, Percent_Identity=24.2677824267782, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787182, Length=242, Percent_Identity=24.7933884297521, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=237, Percent_Identity=25.7383966244726, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=22.265625, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789586, Length=247, Percent_Identity=25.1012145748988, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=26.5765765765766, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786872, Length=250, Percent_Identity=23.2, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786703, Length=243, Percent_Identity=25.1028806584362, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87082267, Length=250, Percent_Identity=24, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787105, Length=203, Percent_Identity=24.1379310344828, Blast_Score=61, Evalue=9e-11, Organism=Escherichia coli, GI145693107, Length=253, Percent_Identity=25.296442687747, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71983510, Length=249, Percent_Identity=30.9236947791165, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71983516, Length=249, Percent_Identity=30.9236947791165, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71983523, Length=249, Percent_Identity=30.9236947791165, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193211015, Length=229, Percent_Identity=25.764192139738, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193211017, Length=229, Percent_Identity=25.764192139738, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI212646699, Length=226, Percent_Identity=26.1061946902655, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17569145, Length=226, Percent_Identity=26.1061946902655, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71996809, Length=229, Percent_Identity=25.3275109170306, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533608, Length=216, Percent_Identity=26.3888888888889, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI221512771, Length=239, Percent_Identity=27.6150627615063, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=28.0851063829787, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29005; Mature: 28874
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQSLISVDRLTMRFGGLTALDELSMTVHEGEILGLLGPNGSGKTTFFNVLTGLYKASS CCCCHHHHHHHHHHHHCCCHHHHHHHHEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCC GSISLGGENILGKTPQQIYRSGVARTFQRSRLSLSLTVFDNIVIGDYQHMQHGLIFNLLR CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCHHHHHHHHHHHHHH RKAFRAEYEAYVEKVKSLLEIFSPPLVGRLFEPVESFTMIDRRRIEVCRALLSRPRLLLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DEPSAGMTHDETDELMQDILQVRGKLDKLSVVLIEHEMNVIERITDRCVVLNYGKKIAEG ECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCEEEEECCCHHCCC SYVEITADPHVQTAYLGEAA CEEEEECCCCEEEECCCCCC >Mature Secondary Structure AGQSLISVDRLTMRFGGLTALDELSMTVHEGEILGLLGPNGSGKTTFFNVLTGLYKASS CCCHHHHHHHHHHHHCCCHHHHHHHHEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCC GSISLGGENILGKTPQQIYRSGVARTFQRSRLSLSLTVFDNIVIGDYQHMQHGLIFNLLR CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCHHHHHHHHHHHHHH RKAFRAEYEAYVEKVKSLLEIFSPPLVGRLFEPVESFTMIDRRRIEVCRALLSRPRLLLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DEPSAGMTHDETDELMQDILQVRGKLDKLSVVLIEHEMNVIERITDRCVVLNYGKKIAEG ECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCEEEEECCCHHCCC SYVEITADPHVQTAYLGEAA CEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]