| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeiT [C]
Identifier: 91789168
GI number: 91789168
Start: 3506937
End: 3508286
Strand: Reverse
Name: yeiT [C]
Synonym: Bpro_3311
Alternate gene names: 91789168
Gene position: 3508286-3506937 (Counterclockwise)
Preceding gene: 91789174
Following gene: 91789167
Centisome position: 67.46
GC content: 62.3
Gene sequence:
>1350_bases ATGACCGAGCAGAGTTCTCCAACCCCCTCATTCCCGGAAACCCTGAGCGAATGCGACGTACTGGTGATCGGTGGTGGTCC GGCGGGGGCCACAGCGGGAGCGTTGCTGGCGCAGCGGGGGCACAAGGTCGTGGTCCTCGAAAAAGAACATCACCCGCGCT TTCACATTGGCGAGTCGCTGCTGCCGGCCAACCTGCCGCTGTTTGAAAAACTCGGTGTGGCCGACGCCGTCAAGGCCATC GGCATGGAGAAATGGGGCGCCGAATTTGTCTCGCCCTGGCATGAGGCCAAGAGCCAGACCTTCAAGTTCGGCGACGCCTG GGACAAGTCCATGCCGTTTTCCTACCAGGTGCGGCGCTCCGAGTTCGACGAAATCCTGATCCGCAATGCCGCCCGCCTGG GTGCCGAAGTCATTGAAGGTTGCCGCGTCAAGGACGTCGCGTTTGCGGCCGACCATGGCAGCGCCACGGTGCATGCGCAG CACGAGGATGGCCGCACGCAGCACTGGCGTGCCCGCTTTGTCGTGGACGCCTCGGGGCGGGACACCTTGCTGGGCAAGCA GTTCGACGTCAAACGCCGCAATCCCAAACACAACAGCTCCGCGCTCTATGGGCACTTCACCGGTGCAATCCGGCATCCGG GCCAGGACGAAGGCAACATCACCATCTTCTGGTTCGAGCATGGCTGGTTCTGGCTGATCCCGTTGGCGGACGGCTTCACC AGCATTGGTGCGGTGGTCTGGCCGCATTATTTGAAGAGCCGGACCAAGCCCGTCAGGGATTTTTTCCTCGACACGATTGC GATGTGCCCGGCCCTGAGCGAGCGGCTGGCCCATGCGACGCTGGCCTCCGAAGTGGAGGCGACCGGCAATTTCTCCTACG CCTGCGATCGCACGCACGGCCCCAATTACGTGATGATTGGCGATGCCTTCACCTTCATTGACCCGGTGTTTTCGTCCGGC GTGATGCTGGCGATGCAGGGCGGCTTTGTCGGGGCCGAGACGGTCGATACCTGCCTGCGCGAACCCGCCAAAGCCGCGTC GGCACTGGCGCATTTTGACCAGCAGGTGCGGCTGGGCCCCAAAGAGTTTTCGTGGTTCATCTACCGCGTGACCAACCCGA CCATGCGCGACATGTTTATGGCGCCCAGCAATGTGTGGCGCGTCAAGGAAGCCCTGCTGTCGATGCTGGCCGGCGATATT TTTGGCAAAACGCCGATCTGGGGTTCGCTGGCGGTGCTCAAGGGCATTTTTTATATTGCCTCGGCCTTGAACTTCAAGCG CTCGTGGCAGGCTATGCGCCTGCGCAAGGCGAACATCCGTGTTGTGGACGGCCCGGGGCTCGCCCGTTGA
Upstream 100 bases:
>100_bases GTGCATCCGTGCCGCAGGCTCACCGACCTGACGGGCGGGGGCTGACCACCCTGCCGGGACCCAACGCCGCAGCCTGGCGG TACCCAACGAAAGACACGCC
Downstream 100 bases:
>100_bases AGGCTGCGCGCGACTGACTATATGGTGGAACACAAACCGAACGCTGCCCTTGACCGGCACCTCGCACTGCATGCCAGACG CATGGGCCTGCATCAAACGC
Product: tryptophan halogenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase Protein; Oxidoreductase; Dehydrogenase; Halogenase; Geranylgeranyl Reductase; Monooxygenase; FADH2 Dependent Halogenase; Pyridine Nucleotide-Disulfide Oxidoreductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; Halogenase B; LOW QUALITY PROTEIN Dehydrogenase; Dehydrogenases; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; Halogenase A; Electron Transfer Flavoprotein; FAD Oxidoreductase; Hydroxylase; Alkylhalidase CmlS; Fad Dependent Oxidoreductase; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTEQSSPTPSFPETLSECDVLVIGGGPAGATAGALLAQRGHKVVVLEKEHHPRFHIGESLLPANLPLFEKLGVADAVKAI GMEKWGAEFVSPWHEAKSQTFKFGDAWDKSMPFSYQVRRSEFDEILIRNAARLGAEVIEGCRVKDVAFAADHGSATVHAQ HEDGRTQHWRARFVVDASGRDTLLGKQFDVKRRNPKHNSSALYGHFTGAIRHPGQDEGNITIFWFEHGWFWLIPLADGFT SIGAVVWPHYLKSRTKPVRDFFLDTIAMCPALSERLAHATLASEVEATGNFSYACDRTHGPNYVMIGDAFTFIDPVFSSG VMLAMQGGFVGAETVDTCLREPAKAASALAHFDQQVRLGPKEFSWFIYRVTNPTMRDMFMAPSNVWRVKEALLSMLAGDI FGKTPIWGSLAVLKGIFYIASALNFKRSWQAMRLRKANIRVVDGPGLAR
Sequences:
>Translated_449_residues MTEQSSPTPSFPETLSECDVLVIGGGPAGATAGALLAQRGHKVVVLEKEHHPRFHIGESLLPANLPLFEKLGVADAVKAI GMEKWGAEFVSPWHEAKSQTFKFGDAWDKSMPFSYQVRRSEFDEILIRNAARLGAEVIEGCRVKDVAFAADHGSATVHAQ HEDGRTQHWRARFVVDASGRDTLLGKQFDVKRRNPKHNSSALYGHFTGAIRHPGQDEGNITIFWFEHGWFWLIPLADGFT SIGAVVWPHYLKSRTKPVRDFFLDTIAMCPALSERLAHATLASEVEATGNFSYACDRTHGPNYVMIGDAFTFIDPVFSSG VMLAMQGGFVGAETVDTCLREPAKAASALAHFDQQVRLGPKEFSWFIYRVTNPTMRDMFMAPSNVWRVKEALLSMLAGDI FGKTPIWGSLAVLKGIFYIASALNFKRSWQAMRLRKANIRVVDGPGLAR >Mature_448_residues TEQSSPTPSFPETLSECDVLVIGGGPAGATAGALLAQRGHKVVVLEKEHHPRFHIGESLLPANLPLFEKLGVADAVKAIG MEKWGAEFVSPWHEAKSQTFKFGDAWDKSMPFSYQVRRSEFDEILIRNAARLGAEVIEGCRVKDVAFAADHGSATVHAQH EDGRTQHWRARFVVDASGRDTLLGKQFDVKRRNPKHNSSALYGHFTGAIRHPGQDEGNITIFWFEHGWFWLIPLADGFTS IGAVVWPHYLKSRTKPVRDFFLDTIAMCPALSERLAHATLASEVEATGNFSYACDRTHGPNYVMIGDAFTFIDPVFSSGV MLAMQGGFVGAETVDTCLREPAKAASALAHFDQQVRLGPKEFSWFIYRVTNPTMRDMFMAPSNVWRVKEALLSMLAGDIF GKTPIWGSLAVLKGIFYIASALNFKRSWQAMRLRKANIRVVDGPGLAR
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49736; Mature: 49605
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSSPTPSFPETLSECDVLVIGGGPAGATAGALLAQRGHKVVVLEKEHHPRFHIGESL CCCCCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCEECCCCC LPANLPLFEKLGVADAVKAIGMEKWGAEFVSPWHEAKSQTFKFGDAWDKSMPFSYQVRRS CCCCCCHHHHCCHHHHHHHHCHHHHCHHHHCHHHHHHHCEEECCCCCCCCCCCEEEEHHH EFDEILIRNAARLGAEVIEGCRVKDVAFAADHGSATVHAQHEDGRTQHWRARFVVDASGR HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCC DTLLGKQFDVKRRNPKHNSSALYGHFTGAIRHPGQDEGNITIFWFEHGWFWLIPLADGFT CCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCEEEEEEECCCEEEEECCCCHH SIGAVVWPHYLKSRTKPVRDFFLDTIAMCPALSERLAHATLASEVEATGNFSYACDRTHG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PNYVMIGDAFTFIDPVFSSGVMLAMQGGFVGAETVDTCLREPAKAASALAHFDQQVRLGP CCEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCC KEFSWFIYRVTNPTMRDMFMAPSNVWRVKEALLSMLAGDIFGKTPIWGSLAVLKGIFYIA CCEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SALNFKRSWQAMRLRKANIRVVDGPGLAR HHHHHHHHHHHHHHHHCCEEEECCCCCCC >Mature Secondary Structure TEQSSPTPSFPETLSECDVLVIGGGPAGATAGALLAQRGHKVVVLEKEHHPRFHIGESL CCCCCCCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCEECCCCC LPANLPLFEKLGVADAVKAIGMEKWGAEFVSPWHEAKSQTFKFGDAWDKSMPFSYQVRRS CCCCCCHHHHCCHHHHHHHHCHHHHCHHHHCHHHHHHHCEEECCCCCCCCCCCEEEEHHH EFDEILIRNAARLGAEVIEGCRVKDVAFAADHGSATVHAQHEDGRTQHWRARFVVDASGR HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCC DTLLGKQFDVKRRNPKHNSSALYGHFTGAIRHPGQDEGNITIFWFEHGWFWLIPLADGFT CCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCEEEEEEECCCEEEEECCCCHH SIGAVVWPHYLKSRTKPVRDFFLDTIAMCPALSERLAHATLASEVEATGNFSYACDRTHG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PNYVMIGDAFTFIDPVFSSGVMLAMQGGFVGAETVDTCLREPAKAASALAHFDQQVRLGP CCEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCC KEFSWFIYRVTNPTMRDMFMAPSNVWRVKEALLSMLAGDIFGKTPIWGSLAVLKGIFYIA CCEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SALNFKRSWQAMRLRKANIRVVDGPGLAR HHHHHHHHHHHHHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA