| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nrtB [H]
Identifier: 91789128
GI number: 91789128
Start: 3459144
End: 3460130
Strand: Direct
Name: nrtB [H]
Synonym: Bpro_3268
Alternate gene names: 91789128
Gene position: 3459144-3460130 (Clockwise)
Preceding gene: 91789127
Following gene: 91789129
Centisome position: 66.52
GC content: 63.53
Gene sequence:
>987_bases ATGGTCAGTGCCGTATTCCACAATCCGCTGGACGCCGCAGCAGCGCCAGCCGCTCGAAGCAGCGAACGCAGTGCTGCCAA TTCAATAGCAGCCACCGCGCACAAACCCGGGGCGCCAGCCCTCAATGACATGAAGAATCCAGCCCCATCCGCCACCGCGG TCCCAGTGGCCGCAGCCGCACCTGCCGCGTCCCGGCAGCCATGGGACTCTTCCTTTCTCTGGCTCGCCATCCTGCCACCC CTGCTGGGCCTGGGCCTGCTGGTGTTGGTGTGGGAGCTGGTCTCCGTGGGCACTGGCGCCAGCATTCCCTCGCCCAGGGA CACCTTCACGCAGGCCGTGCAGGTGTTCAGCGACCCCTTCTACAACAAGGGACCGAATGACCAGGGCGTGGGCTGGAACG TGCTGTCGTCGCTCAAACGCGTGGCCATGGGCTTCGGCATGGCGGCCATCGTCGGCATTCCGGTCGGCTTCATGATTGGC CGCTTCGACTTTTTGAGCCGCATGTTCAACCCGCTGATCAGCCTGCTGCGCCCCGTCTCGCCGCTGGCCTGGCTGCCGAT CGGCCTGCTGGTGTTCAAGGGCGCCAACCCGGCCGCCATCTGGACCATCTTCATCTGCTCGATCTGGCCCATGATCATCA ACACCGCCGTGGGCGTGCAGCGCGTGCCCCAGGACTACATGAACGTGGCGCGGGTGCTCAACCTGTCGGAGTGGAAGATC GTCAGCAAGATCCTCTTTCCTGCCGTGCTGCCCTACATGCTGACCGGTGTGCGCCTGGCCGTCGGCACCGCCTGGCTGGT GATCGTGGCAGCCGAAATGCTGACCGGTGGCGTCGGCATCGGCTTCTGGGTCTGGGACGAGTGGAACAACCTGAACGTCA AGAACATCATCATCGCGATTTTCGTGATCGGCATTGTGGGGCTGGTGCTGGAGTTTGCGCTGATCAAGCTCGCCACGGCC TTCACGTTCGAAGAAGTGAAGAACTGA
Upstream 100 bases:
>100_bases GGGACGGCAAGGATCCGAAAAAGTACGCCGATGGCTTCAAGGTCCGCGCCTGAAATAGCCGCCGAGCATTCATCAATATC CCACCAAAGGACGTGACACC
Downstream 100 bases:
>100_bases TAACCCCCAAACAACCGAGGATGACGACCATGAGCACATCTTTCACCACCAAGTACATCGAAATCCAGGGCGTCGAGCAG ACCTTCAAGACCAAGAAAGG
Product: nitrate transport permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MVSAVFHNPLDAAAAPAARSSERSAANSIAATAHKPGAPALNDMKNPAPSATAVPVAAAAPAASRQPWDSSFLWLAILPP LLGLGLLVLVWELVSVGTGASIPSPRDTFTQAVQVFSDPFYNKGPNDQGVGWNVLSSLKRVAMGFGMAAIVGIPVGFMIG RFDFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKI VSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVKNIIIAIFVIGIVGLVLEFALIKLATA FTFEEVKN
Sequences:
>Translated_328_residues MVSAVFHNPLDAAAAPAARSSERSAANSIAATAHKPGAPALNDMKNPAPSATAVPVAAAAPAASRQPWDSSFLWLAILPP LLGLGLLVLVWELVSVGTGASIPSPRDTFTQAVQVFSDPFYNKGPNDQGVGWNVLSSLKRVAMGFGMAAIVGIPVGFMIG RFDFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKI VSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVKNIIIAIFVIGIVGLVLEFALIKLATA FTFEEVKN >Mature_328_residues MVSAVFHNPLDAAAAPAARSSERSAANSIAATAHKPGAPALNDMKNPAPSATAVPVAAAAPAASRQPWDSSFLWLAILPP LLGLGLLVLVWELVSVGTGASIPSPRDTFTQAVQVFSDPFYNKGPNDQGVGWNVLSSLKRVAMGFGMAAIVGIPVGFMIG RFDFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKI VSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVKNIIIAIFVIGIVGLVLEFALIKLATA FTFEEVKN
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=212, Percent_Identity=30.188679245283, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87081802, Length=142, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35084; Mature: 35084
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAVFHNPLDAAAAPAARSSERSAANSIAATAHKPGAPALNDMKNPAPSATAVPVAAAA CCCCHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHCC PAASRQPWDSSFLWLAILPPLLGLGLLVLVWELVSVGTGASIPSPRDTFTQAVQVFSDPF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC YNKGPNDQGVGWNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLAWLPIGLLVFKGANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH VSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVKNIIIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH FVIGIVGLVLEFALIKLATAFTFEEVKN HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSAVFHNPLDAAAAPAARSSERSAANSIAATAHKPGAPALNDMKNPAPSATAVPVAAAA CCCCHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHCC PAASRQPWDSSFLWLAILPPLLGLGLLVLVWELVSVGTGASIPSPRDTFTQAVQVFSDPF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC YNKGPNDQGVGWNVLSSLKRVAMGFGMAAIVGIPVGFMIGRFDFLSRMFNPLISLLRPVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLAWLPIGLLVFKGANPAAIWTIFICSIWPMIINTAVGVQRVPQDYMNVARVLNLSEWKI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH VSKILFPAVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVKNIIIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH FVIGIVGLVLEFALIKLATAFTFEEVKN HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]