| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is phnA [H]
Identifier: 91789080
GI number: 91789080
Start: 3408234
End: 3409460
Strand: Direct
Name: phnA [H]
Synonym: Bpro_3220
Alternate gene names: 91789080
Gene position: 3408234-3409460 (Clockwise)
Preceding gene: 91789079
Following gene: 91789081
Centisome position: 65.54
GC content: 64.38
Gene sequence:
>1227_bases ATGAACAAAGACATTACCGTGAACGACAGGCGCTACCAATGGATGGACCACCCGGTGGTGGTGGTCTGCGTGGACGGCTG CCAGTACGAATACATCACCGCCGCCGTGGCGGCCGGCGTGGCACCCTTCCTGGGCAGGCTGCTGGCCGGGCGCGGCACCT GCTACATGGCGGACTGCGTCATTCCAAGTTTCACCAACCCGAACAACCTGTCCATCGTGACGGGTGCGCCACCCTCGGTG CACGGCATCTGCGGCAACTACTTCTTCGACCGCGAGCGGGGTGAAGAGGTGATGATGAACGACCCCCGCTACCTGCGCGC GGGCACCATCCTGGCAGCCTTCGCCGATGCGGGCGCCAAGGTGGCCGTGATCACGGCGAAGGACAAACTGCGCAAGCTGC TGGGCCACAAAATGGACGGCATCTGCTTTTCCTCGGAAAAGGCCGACCAGGTGAGCGTCGAGGAAAACGGCATTGACGAC GTGCTCGGCATGGTCGGCATGCCGGTGCCTTCGGTCTACAGCGCCGAGCTGTCGGAGTTCGTGTTTGTCGCCGGCGTCAA GCTGATGGAGCGCGAGCGGCCTGACCTGATGTATTTGTCCACTACCGACTACATCCAGCACAAGGCAGCCCCCGGCACCA CGATGGCAAACGACTTCTACGCCATGATGGATCGCAACCTCGCCCGTCTGGACATGCTGGGCGCCACCATTGTGCTCACC GCGGACCACGGCATGAACGACAAGCACGGCCGGGACGGGCAGCCCAATGTGATTTACCTGCAGGACACGCTGGACGAATG GATTGGCCAGGACCATGCCCGCGTCATCCTGCCCATCACCGACCCGTATGTGGTGCACCACGGCGCGCTCGGCTCATTCG CGCTCGTCTATGTGCCGGAAGATGTGGACGCCAGCGCGCTGCGTGACCGCATTGCCGCGCTGCCAGGCATTGAGACGGTG CTGTCGCGCCTGGAGGCCTGCGACCATTTCGAGCTGCCGTTCGACCGGGTTGGAGACATCGTGGTGGTGGCAAGCCAGGA CACAGTGATCGGCACCAACGCCGAGCGCCATGACCTCTCGGGGCTGGACGTGCCGCTGCGCTCCCACGGGGGCGTGTCGG AGCAGAAAGTGCCGCTGGTCGTCAACCGCCAGGTGCCCCAGGCCTTCCCCGACCGGCGCTGGCGCAATTTTGACGCCTTC GAGCTCGGCCTCAACCTGGCCCGCTGA
Upstream 100 bases:
>100_bases ATGCACAAGGCTTTTGGCAGAGGCGCCAGTGAGCCAGTCTCTCCCGCAATTTCCCTGAAAAAACCACGGCCCATCATGGC CATCAACCCCTGAGGACATC
Downstream 100 bases:
>100_bases TCCACCGCAAAAACATCACCGAACCGCCACAGAAACAGAAACAAGGAACCAACATGTCTGCCGTACTTGCCGATGCTCCT TCCCAGGCACTTCCTTCCCG
Product: phosphonoacetate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MNKDITVNDRRYQWMDHPVVVVCVDGCQYEYITAAVAAGVAPFLGRLLAGRGTCYMADCVIPSFTNPNNLSIVTGAPPSV HGICGNYFFDRERGEEVMMNDPRYLRAGTILAAFADAGAKVAVITAKDKLRKLLGHKMDGICFSSEKADQVSVEENGIDD VLGMVGMPVPSVYSAELSEFVFVAGVKLMERERPDLMYLSTTDYIQHKAAPGTTMANDFYAMMDRNLARLDMLGATIVLT ADHGMNDKHGRDGQPNVIYLQDTLDEWIGQDHARVILPITDPYVVHHGALGSFALVYVPEDVDASALRDRIAALPGIETV LSRLEACDHFELPFDRVGDIVVVASQDTVIGTNAERHDLSGLDVPLRSHGGVSEQKVPLVVNRQVPQAFPDRRWRNFDAF ELGLNLAR
Sequences:
>Translated_408_residues MNKDITVNDRRYQWMDHPVVVVCVDGCQYEYITAAVAAGVAPFLGRLLAGRGTCYMADCVIPSFTNPNNLSIVTGAPPSV HGICGNYFFDRERGEEVMMNDPRYLRAGTILAAFADAGAKVAVITAKDKLRKLLGHKMDGICFSSEKADQVSVEENGIDD VLGMVGMPVPSVYSAELSEFVFVAGVKLMERERPDLMYLSTTDYIQHKAAPGTTMANDFYAMMDRNLARLDMLGATIVLT ADHGMNDKHGRDGQPNVIYLQDTLDEWIGQDHARVILPITDPYVVHHGALGSFALVYVPEDVDASALRDRIAALPGIETV LSRLEACDHFELPFDRVGDIVVVASQDTVIGTNAERHDLSGLDVPLRSHGGVSEQKVPLVVNRQVPQAFPDRRWRNFDAF ELGLNLAR >Mature_408_residues MNKDITVNDRRYQWMDHPVVVVCVDGCQYEYITAAVAAGVAPFLGRLLAGRGTCYMADCVIPSFTNPNNLSIVTGAPPSV HGICGNYFFDRERGEEVMMNDPRYLRAGTILAAFADAGAKVAVITAKDKLRKLLGHKMDGICFSSEKADQVSVEENGIDD VLGMVGMPVPSVYSAELSEFVFVAGVKLMERERPDLMYLSTTDYIQHKAAPGTTMANDFYAMMDRNLARLDMLGATIVLT ADHGMNDKHGRDGQPNVIYLQDTLDEWIGQDHARVILPITDPYVVHHGALGSFALVYVPEDVDASALRDRIAALPGIETV LSRLEACDHFELPFDRVGDIVVVASQDTVIGTNAERHDLSGLDVPLRSHGGVSEQKVPLVVNRQVPQAFPDRRWRNFDAF ELGLNLAR
Specific function: Specifically hydrolyzes phosphonoacetate. Does not have activity on other organophosphonates or acetates [H]
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family. PhnA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR002591 - InterPro: IPR012710 - InterPro: IPR023116 [H]
Pfam domain/function: PF01663 Phosphodiest [H]
EC number: =3.11.1.2 [H]
Molecular weight: Translated: 44855; Mature: 44855
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDITVNDRRYQWMDHPVVVVCVDGCQYEYITAAVAAGVAPFLGRLLAGRGTCYMADCV CCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC IPSFTNPNNLSIVTGAPPSVHGICGNYFFDRERGEEVMMNDPRYLRAGTILAAFADAGAK CCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEECCCCEEEHHHEEEEECCCCCE VAVITAKDKLRKLLGHKMDGICFSSEKADQVSVEENGIDDVLGMVGMPVPSVYSAELSEF EEEEECHHHHHHHHCCCCCCEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHH VFVAGVKLMERERPDLMYLSTTDYIQHKAAPGTTMANDFYAMMDRNLARLDMLGATIVLT HHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEE ADHGMNDKHGRDGQPNVIYLQDTLDEWIGQDHARVILPITDPYVVHHGALGSFALVYVPE ECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEEEEECC DVDASALRDRIAALPGIETVLSRLEACDHFELPFDRVGDIVVVASQDTVIGTNAERHDLS CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCEEEECCCCCCCCC GLDVPLRSHGGVSEQKVPLVVNRQVPQAFPDRRWRNFDAFELGLNLAR CCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure MNKDITVNDRRYQWMDHPVVVVCVDGCQYEYITAAVAAGVAPFLGRLLAGRGTCYMADCV CCCCEEECCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC IPSFTNPNNLSIVTGAPPSVHGICGNYFFDRERGEEVMMNDPRYLRAGTILAAFADAGAK CCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEEECCCCEEEHHHEEEEECCCCCE VAVITAKDKLRKLLGHKMDGICFSSEKADQVSVEENGIDDVLGMVGMPVPSVYSAELSEF EEEEECHHHHHHHHCCCCCCEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHHH VFVAGVKLMERERPDLMYLSTTDYIQHKAAPGTTMANDFYAMMDRNLARLDMLGATIVLT HHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEE ADHGMNDKHGRDGQPNVIYLQDTLDEWIGQDHARVILPITDPYVVHHGALGSFALVYVPE ECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEEEEECC DVDASALRDRIAALPGIETVLSRLEACDHFELPFDRVGDIVVVASQDTVIGTNAERHDLS CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCEEEECCCCCCCCC GLDVPLRSHGGVSEQKVPLVVNRQVPQAFPDRRWRNFDAFELGLNLAR CCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA