| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mutL [H]
Identifier: 91789069
GI number: 91789069
Start: 3394010
End: 3395992
Strand: Direct
Name: mutL [H]
Synonym: Bpro_3209
Alternate gene names: 91789069
Gene position: 3394010-3395992 (Clockwise)
Preceding gene: 91789067
Following gene: 91789070
Centisome position: 65.27
GC content: 67.98
Gene sequence:
>1983_bases ATGGCTGCAACCATGAGCGCCCTGCCGTCAACCCTTTCGCCGCTCCAGACCTCCCCGCCCCCGCGCAAACCCATCCGCGA GTTGCCGGACGAGCTGATCAGCCAGATCGCCGCCGGCGAGGTGGTCGAACGGCCGGCTTCGGTGGTGCGCGAACTGGTGG ATAACGCGCTGGACGCAGGGGCCACGCAGGTGACGGTGCGACTGCTGGCCGGCGGCGTGCGGCTGATCCTCGTGGAGGAC GACGGCCAGGGCATCCCGCGCGAAGAATTGCCGGTGGCCCTGCGGCGCCACGCCACCAGCAAGATCGCCTCGCTGCAGGA CCTCGAAGCCGTGGGCACCATGGGCTTTCGGGGTGAGGCGCTGGCCGCCATCAACTCGATTGCCGACATGAGCCTGCTGT CAAGAACACTTGACGGAGCCAGCGGGAACGCCGGCGAAGCCGCCCATGCCTGGCAACTCGATGGCCGCACCGGCGAGTTG AAGCCGGCCGCGCGCTCCCGCGGCACCAGCGTGGAAGTGCGCGAACTCTTTTATGCCACCCCGGCGCGCCGCAAGTTTTT GAAAACCGACGCCACCGAACTGGCCCATTGCATTGAAGCCGTGCGCCGCCATGCGCTGGTGCGGCCAGACGTCGGCTTTG CCATCTGGCACGAGGGCAAGCTGGTGGAGCAATGGCGCGCCTGCCCTGGTGAACCGGCTGCGGCCCACACGCAGCGTCTG GCCGATGTGCTGGGCAGCGACTTTGTCGAGCAATCCGTCGCGGTCTATTACGAAAGCGCGGCGCGGCGGACCGACGGGCT GCCCGCAGTGCGCGTGTGGGGCCGCGCCGGCATTCCGGATGCTGCGCGCTCGCGCGCCGACCAGCAGTTTGCCTATGTCA ATGGCCGCTATGTACGCGACAAGGTGCTGACCCACGCGGCACGCAGCGCCTATGAAGACGTGCTGCACGGCCATCGCCAG CCGGTGTATGCGCTGTATGTCGAGATGGACCCGGCCCGCGTCGACGTGAACGTGCACCCGACCAAAATCGAAGTGCGCTT TCGCGACAGCCGCGAGGTGCACCAGGCAGTGCGCCACGCCACCGAAAACGCACTGGCCACGCCTCGCTCGGCCGCTGCGG CCAGCCCCGACGGTGCTGCAGCCGACACTGCCGCCCCCCTGATTTCCAGCGAATTTTCAGCATCAAATACCGGCTTTACC CAGAAAACCTGGGGGCAGCCAACGATCAACTTCGCAGCAAATGGTGGCCACCGGGCGTCGGACTTCGAGGCGATGTGGCC GGTACCGGTGCAGCCTGGCAGGCCAGCGGCAAGCGACGGCTTTTCACCCTCGCCAAGCCTCCCCCAAGGCGCCTCCTCCG CCGGCCCGGCAGACAGCCTGCCGCCCGGCGACTGGCCGCTGGGCCGCGCCATCGCCCAACTGCAGGGCATTTACGTACTG GCCGAGAACGCGCAGGGCCTGGTCATCGTGGACATGCACGCGGCCCACGAGCGCATCGTCTATGAACGCCTGAAAAGCCA GATGGACAGCAGCGAAGGCGCGCACATTGCCAGCCAGCCCCTGCTGATTCCGGCCACCTTTGCCGCCAGCCCGCAGGAAG TGGCCACCGCCGAGGCTTGCATTGAAACGCTGGCCACCCTGGGCCTGGAAATCACGCCGTTTTCCCCCAGGACCCTGGCG GTGCGCGCCGTGCCGACCAGCCTGGCACAGGGGGACGCGGTGGAACTGGCGCGTAGCGTGCTGGCCGAGCTGGCCCAGCA CGACGCCAGCACCGTGATCCAGCGGGCCCAGAATGAGCTGCTCTCTACCATGGCCTGCCATGGCGCCGTGCGGGCCAACC GCAAGCTCACGATTGACGAGATGAACGCCCTGCTGCGCCAGATGGAAGCCACCGAGCGCTCCGACCAGTGCAACCACGGG CGGCCCACCTGGCGGCAGGTGAGCATCCGGGAGCTGGACGCCCTGTTTCTGCGCGGGCGCTGA
Upstream 100 bases:
>100_bases TGGAGAATGAAATCCATCAGATAAGTTAGCAGTTCCATGAGACGGGATTATCGGGGCTGAATAAGACAGGCTTGGCAGCC CGCCGGCTCCGCCCCCTAAA
Downstream 100 bases:
>100_bases ACTTTCCGCCCGCCCGCGTATCACTTATCTGCATGAAACGCTGGCACCTCTTCACTTCCTTCTGCGCGGCGCTGGCCTTG ATGGCGGGTTGCGCCACGCT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 659
Protein sequence:
>660_residues MAATMSALPSTLSPLQTSPPPRKPIRELPDELISQIAAGEVVERPASVVRELVDNALDAGATQVTVRLLAGGVRLILVED DGQGIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEALAAINSIADMSLLSRTLDGASGNAGEAAHAWQLDGRTGEL KPAARSRGTSVEVRELFYATPARRKFLKTDATELAHCIEAVRRHALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRL ADVLGSDFVEQSVAVYYESAARRTDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRDKVLTHAARSAYEDVLHGHRQ PVYALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHATENALATPRSAAAASPDGAAADTAAPLISSEFSASNTGFT QKTWGQPTINFAANGGHRASDFEAMWPVPVQPGRPAASDGFSPSPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVL AENAQGLVIVDMHAAHERIVYERLKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEACIETLATLGLEITPFSPRTLA VRAVPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNELLSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQCNHG RPTWRQVSIRELDALFLRGR
Sequences:
>Translated_660_residues MAATMSALPSTLSPLQTSPPPRKPIRELPDELISQIAAGEVVERPASVVRELVDNALDAGATQVTVRLLAGGVRLILVED DGQGIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEALAAINSIADMSLLSRTLDGASGNAGEAAHAWQLDGRTGEL KPAARSRGTSVEVRELFYATPARRKFLKTDATELAHCIEAVRRHALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRL ADVLGSDFVEQSVAVYYESAARRTDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRDKVLTHAARSAYEDVLHGHRQ PVYALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHATENALATPRSAAAASPDGAAADTAAPLISSEFSASNTGFT QKTWGQPTINFAANGGHRASDFEAMWPVPVQPGRPAASDGFSPSPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVL AENAQGLVIVDMHAAHERIVYERLKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEACIETLATLGLEITPFSPRTLA VRAVPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNELLSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQCNHG RPTWRQVSIRELDALFLRGR >Mature_659_residues AATMSALPSTLSPLQTSPPPRKPIRELPDELISQIAAGEVVERPASVVRELVDNALDAGATQVTVRLLAGGVRLILVEDD GQGIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEALAAINSIADMSLLSRTLDGASGNAGEAAHAWQLDGRTGELK PAARSRGTSVEVRELFYATPARRKFLKTDATELAHCIEAVRRHALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRLA DVLGSDFVEQSVAVYYESAARRTDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRDKVLTHAARSAYEDVLHGHRQP VYALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHATENALATPRSAAAASPDGAAADTAAPLISSEFSASNTGFTQ KTWGQPTINFAANGGHRASDFEAMWPVPVQPGRPAASDGFSPSPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVLA ENAQGLVIVDMHAAHERIVYERLKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEACIETLATLGLEITPFSPRTLAV RAVPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNELLSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQCNHGR PTWRQVSIRELDALFLRGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=349, Percent_Identity=32.6647564469914, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI4505911, Length=394, Percent_Identity=27.6649746192893, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI189458898, Length=394, Percent_Identity=27.6649746192893, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI4505913, Length=349, Percent_Identity=27.7936962750716, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI310128478, Length=349, Percent_Identity=27.7936962750716, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI189458896, Length=391, Percent_Identity=25.5754475703325, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI263191589, Length=260, Percent_Identity=28.8461538461538, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI310128480, Length=294, Percent_Identity=25.8503401360544, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI91992162, Length=361, Percent_Identity=24.3767313019391, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI91992160, Length=361, Percent_Identity=24.3767313019391, Blast_Score=75, Evalue=3e-13, Organism=Escherichia coli, GI1790612, Length=578, Percent_Identity=37.5432525951557, Blast_Score=308, Evalue=6e-85, Organism=Caenorhabditis elegans, GI71991825, Length=332, Percent_Identity=34.0361445783133, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17562796, Length=364, Percent_Identity=26.0989010989011, Blast_Score=131, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=370, Percent_Identity=28.3783783783784, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=380, Percent_Identity=26.0526315789474, Blast_Score=127, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6325093, Length=742, Percent_Identity=21.4285714285714, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323063, Length=203, Percent_Identity=28.0788177339901, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17136968, Length=342, Percent_Identity=30.1169590643275, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17136970, Length=370, Percent_Identity=26.7567567567568, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 70908; Mature: 70776
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATMSALPSTLSPLQTSPPPRKPIRELPDELISQIAAGEVVERPASVVRELVDNALDAG CCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATQVTVRLLAGGVRLILVEDDGQGIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEA HHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LAAINSIADMSLLSRTLDGASGNAGEAAHAWQLDGRTGELKPAARSRGTSVEVRELFYAT HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCC PARRKFLKTDATELAHCIEAVRRHALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRL HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHH ADVLGSDFVEQSVAVYYESAARRTDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHEEHCCCCHHHH KVLTHAARSAYEDVLHGHRQPVYALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHA HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHH TENALATPRSAAAASPDGAAADTAAPLISSEFSASNTGFTQKTWGQPTINFAANGGHRAS HHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC DFEAMWPVPVQPGRPAASDGFSPSPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE AENAQGLVIVDMHAAHERIVYERLKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEAC EECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHH IETLATLGLEITPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNEL HHHHHHCCCEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQCNHGRPTWRQVSIRELDALFLRGR HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AATMSALPSTLSPLQTSPPPRKPIRELPDELISQIAAGEVVERPASVVRELVDNALDAG CCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATQVTVRLLAGGVRLILVEDDGQGIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEA HHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LAAINSIADMSLLSRTLDGASGNAGEAAHAWQLDGRTGELKPAARSRGTSVEVRELFYAT HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCC PARRKFLKTDATELAHCIEAVRRHALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRL HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHH ADVLGSDFVEQSVAVYYESAARRTDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHEEHCCCCHHHH KVLTHAARSAYEDVLHGHRQPVYALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHA HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHH TENALATPRSAAAASPDGAAADTAAPLISSEFSASNTGFTQKTWGQPTINFAANGGHRAS HHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC DFEAMWPVPVQPGRPAASDGFSPSPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE AENAQGLVIVDMHAAHERIVYERLKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEAC EECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHH IETLATLGLEITPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNEL HHHHHHCCCEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQCNHGRPTWRQVSIRELDALFLRGR HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]