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The map label for this gene is rbsC [H]

Identifier: 91789064

GI number: 91789064

Start: 3389682

End: 3390728

Strand: Direct

Name: rbsC [H]

Synonym: Bpro_3204

Alternate gene names: 91789064

Gene position: 3389682-3390728 (Clockwise)

Preceding gene: 91789063

Following gene: 91789065

Centisome position: 65.18

GC content: 63.9

Gene sequence:

>1047_bases
ATGACCCGGCAGTTGCCCGAAGCAGACCTTGGGTTGGCGGGACCGCCTGAGCGCGCCCCTGTTCCTTCAATCACTTCGAG
GGGTTCACCGATGAATTCAACTTCACGCCACATCCCGTGGGGGGCCCTGGGCCCCTGGCTGGCCCTGCTGGCCACCTGCA
TCTTTTTTACCACCCAGTCAGACCGTTTCCTGACCGGTGAAAACCTGTCACTGGTGCTGCAGCAGGTGATGGTTGTGGGC
ATCCTGGCCATCGGCCAGACCCTGATCATCCTGACTGCCGGCATCGACCTGTCATGCGGCATGGTCATGGCACTGGGCAG
CATGATCATGACCAAGTTCGCGGTGAACTACGGCATCAACCCCTACCTGGCCATTGTCTGCGGGCTGGCGGTCACCACCG
GCTTTGGACTCATCAACGGCCTGCTGGTCACCCGCGTCAAGCTGCCCCCCTTCATCGTGACGCTGGGCACCCTGAACATC
GCGTTCGCCATCACCCAGATTTACTCCAACGCGCAAATCATTTCCAACCTCCCGGATGAAATGACCGCCCTGGGCAACAC
CTTCAGCCTGGGCAGCACCGAAGTCAGCCTGGGGACGGTCACGATGATCGCCCTGTACGCCCTCGCATGGTTCGTGCTGC
GGGAGACCGCGCCGGGCCGCCACCTGTACGCGGTGGGCAACAACGCCGAAGCCGCGCGCCTGACCGGCATCCGGGTCGAC
CGCGTGCTGGTGACGGTCTATGCGCTGGCGGGTCTTTTTTACGGCATTGCCGCGCTGTTGTCGGTCGCGCGCACCGGCGT
GGGCGACCCCAACGCCGGGCAAACCGAAAACCTGGATGCCATCACCGCCGTGGTGCTGGGCGGCACCAGCCTGTTTGGCG
GGCGCGGCATCATCCTGGGCTCGCTGGTGGGCGCGGTGATTGTGGGCGTGTTCCGCAATGGCCTGACGCTGATGGGCGTT
GCCTCCGTTTATCAAACGCTGATCACCGGCATCCTGGTGATCCTCGCAGTCGCTGCTGACCAGATGTCGCGCAAGGGGCC
CCGCTGA

Upstream 100 bases:

>100_bases
GCTACACCGACACCGGCGTAACCCTGATCTCGGCCAAGCCGGTCAGCGGCGTGGACAGCAAGGACCTCAAGACGGGCATG
GACCTTTGCTGGGGCACCAA

Downstream 100 bases:

>100_bases
TGAATACCACCTCACCCAACCACTCACCCAACGCCTCCTCCCCTCTGGTCATGCAGGCCCGGGGCCTGGTCAAACGCTAC
GGCCAGGTGACTGCGCTGGA

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTRQLPEADLGLAGPPERAPVPSITSRGSPMNSTSRHIPWGALGPWLALLATCIFFTTQSDRFLTGENLSLVLQQVMVVG
ILAIGQTLIILTAGIDLSCGMVMALGSMIMTKFAVNYGINPYLAIVCGLAVTTGFGLINGLLVTRVKLPPFIVTLGTLNI
AFAITQIYSNAQIISNLPDEMTALGNTFSLGSTEVSLGTVTMIALYALAWFVLRETAPGRHLYAVGNNAEAARLTGIRVD
RVLVTVYALAGLFYGIAALLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIILGSLVGAVIVGVFRNGLTLMGV
ASVYQTLITGILVILAVAADQMSRKGPR

Sequences:

>Translated_348_residues
MTRQLPEADLGLAGPPERAPVPSITSRGSPMNSTSRHIPWGALGPWLALLATCIFFTTQSDRFLTGENLSLVLQQVMVVG
ILAIGQTLIILTAGIDLSCGMVMALGSMIMTKFAVNYGINPYLAIVCGLAVTTGFGLINGLLVTRVKLPPFIVTLGTLNI
AFAITQIYSNAQIISNLPDEMTALGNTFSLGSTEVSLGTVTMIALYALAWFVLRETAPGRHLYAVGNNAEAARLTGIRVD
RVLVTVYALAGLFYGIAALLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIILGSLVGAVIVGVFRNGLTLMGV
ASVYQTLITGILVILAVAADQMSRKGPR
>Mature_347_residues
TRQLPEADLGLAGPPERAPVPSITSRGSPMNSTSRHIPWGALGPWLALLATCIFFTTQSDRFLTGENLSLVLQQVMVVGI
LAIGQTLIILTAGIDLSCGMVMALGSMIMTKFAVNYGINPYLAIVCGLAVTTGFGLINGLLVTRVKLPPFIVTLGTLNIA
FAITQIYSNAQIISNLPDEMTALGNTFSLGSTEVSLGTVTMIALYALAWFVLRETAPGRHLYAVGNNAEAARLTGIRVDR
VLVTVYALAGLFYGIAALLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIILGSLVGAVIVGVFRNGLTLMGVA
SVYQTLITGILVILAVAADQMSRKGPR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=302, Percent_Identity=38.4105960264901, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1790524, Length=327, Percent_Identity=33.0275229357798, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1788896, Length=334, Percent_Identity=33.2335329341317, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=32.0557491289199, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1789992, Length=135, Percent_Identity=43.7037037037037, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1788471, Length=319, Percent_Identity=34.4827586206897, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI145693152, Length=329, Percent_Identity=28.2674772036474, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787793, Length=278, Percent_Identity=32.0143884892086, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI145693214, Length=250, Percent_Identity=34.8, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787794, Length=295, Percent_Identity=29.1525423728814, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36321; Mature: 36190

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQLPEADLGLAGPPERAPVPSITSRGSPMNSTSRHIPWGALGPWLALLATCIFFTTQS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DRFLTGENLSLVLQQVMVVGILAIGQTLIILTAGIDLSCGMVMALGSMIMTKFAVNYGIN
CCEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
PYLAIVCGLAVTTGFGLINGLLVTRVKLPPFIVTLGTLNIAFAITQIYSNAQIISNLPDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHCCCHH
MTALGNTFSLGSTEVSLGTVTMIALYALAWFVLRETAPGRHLYAVGNNAEAARLTGIRVD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCHHH
RVLVTVYALAGLFYGIAALLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIILG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCHHHHH
SLVGAVIVGVFRNGLTLMGVASVYQTLITGILVILAVAADQMSRKGPR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRQLPEADLGLAGPPERAPVPSITSRGSPMNSTSRHIPWGALGPWLALLATCIFFTTQS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DRFLTGENLSLVLQQVMVVGILAIGQTLIILTAGIDLSCGMVMALGSMIMTKFAVNYGIN
CCEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
PYLAIVCGLAVTTGFGLINGLLVTRVKLPPFIVTLGTLNIAFAITQIYSNAQIISNLPDE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHCCCHH
MTALGNTFSLGSTEVSLGTVTMIALYALAWFVLRETAPGRHLYAVGNNAEAARLTGIRVD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCHHH
RVLVTVYALAGLFYGIAALLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIILG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHCCCCHHHHH
SLVGAVIVGVFRNGLTLMGVASVYQTLITGILVILAVAADQMSRKGPR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]