| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pyrG [H]
Identifier: 91789041
GI number: 91789041
Start: 3365027
End: 3366718
Strand: Direct
Name: pyrG [H]
Synonym: Bpro_3181
Alternate gene names: 91789041
Gene position: 3365027-3366718 (Clockwise)
Preceding gene: 91789036
Following gene: 91789042
Centisome position: 64.71
GC content: 59.75
Gene sequence:
>1692_bases ATGACCAAATTTGTCTTCGTCACCGGCGGTGTGGTGTCTTCCCTGGGCAAGGGAATCGCCTCAGCCTCCTTAGCTGCGAT CCTTGAATCGCGAGGCCTCAAAGTCACTCTTATCAAGCTGGATCCCTACCTCAACGTGGATCCCGGCACCATGTCGCCCT TTCAGCACGGTGAAGTTTTCGTCACTGATGACGGCGCCGAAACCGATCTGGACCTGGGCCACTACGAGCGCTTCATTGAA ACGCGCATGCGCAAGGCCAACAACTTCACCACCGGCCAGATTTACAAAAGCGTGCTCGAAAAAGAACGTCGCGGCGACTA TCTTGGGAAGACCGTGCAGGTCATTCCCCACGTCACCAACGAAATTCAGGAATTCATCAAGCGCGGCGCTGGCTATGAAA CCGCTGATGCGGTCGATGTGGCGATTGTCGAAGTAGGCGGCACCGTCGGCGACATCGAATCCCTGCCCTTTCTGGAGGCC GTGCGGCAGATGAGCCTGCGGATGGGGCCCAACAACACCGCATTTGTGCATCTGAGCTATGTGCCGTGGATTGCGGCCGC CGGCGAACTCAAGACCAAGCCGACGCAGCACACGGCCAAGCAATTGCGCGAAATCGGCATTCAGGCCGACGTGCTGCTGT GCCGCGCAGACCGTCGCATTCCGGCGGAAGAGCGTGAAAAAATCTCCCTCTTCTCCAACGTGCCCGAGTGGGGTGTCATT TCCATGTGGGACGTGGACACGATTTACAAGGTCCCGCGCATGTTGCACGAGCAGGGACTGGATGGCCTGATCTGCGACAA GCTGCGCCTGAATACGCCGCCAGCCAATCTCAAGCGCTGGGACGATCTGGTGTATGAAACCGAGCATCCCAAGACCGAGG TCAACATTGCCATGGTTGGCAAGTATGTGGACCTCTCCGACAGCTACAAGTCGCTCAACGAGGCCCTGCGTCATGCGGGC ATGAAAAACCATGCCAAGGTGGTCATCGAGTATTTCGACTCCGAAACCATCACCCCCGATAACGTGTCGCGCCTGGCACG CTTCGACGGCATTCTGGTGCCTGGCGGCTTCGGTGTGCGGGGTGTCGAAGGCAAGATTTGCGCCGCCCGCTTCGCCCGTG AAAACAAAATACCCTACCTCGGTATCTGCCTGGGCATGCAAGTGGCCACCATCGAATTTGCGCGCCACGTCGCGGGCCTG AAAGACGCGAACAGCACCGAGTTCGACCCGGCCACCCCCAACCCCGTTATCGCGCTCATCACCGAGTGGAAAGACGCCGA CGGCACCATCAAGACGCGCGACGCCAAGTCCGACCTGGGTGGCACCATGCGGCTTGGCGCTCAAAGCTCCGATGTCGCCA AGGGCTCGCTGGCCCACAAAATCTATGGCGATGTGGTGACCGAGCGGCATCGCCATCGCTATGAAGCCAACGTCAACTAC CTCGACGCCTTGCGCAAATCGGGCCTCGTCATTTCGGCGCTCACGCAGCGCGAGCACCTGACCGAGATCGTGGAATTGCC GCAGGATGTGCACCCGTGGTTCGTGGGTGTGCAGTTTCACCCCGAATTCAAATCCACCCCCTGGGCCGGGCACCCGCTGT TCAATGCCTACATTGCGGCGGTGCTTGAGCACCGCGTCAAGGCCGGCCAGGATGGCAAAGCCACGGCCAAGGCCCTGAAA GCGGTGGCCTGA
Upstream 100 bases:
>100_bases AGGAAAGCCCGGGTTTTAGTGCCTCCGCTGGCGGCCGCCGTGCGGCCAACCCGTATAATCTCCGTTTACCACCTCTGCGA ACTTGCGGTTCGTACCTGAC
Downstream 100 bases:
>100_bases CCATGAAACTATGCGGATTTGACATTGGTCTGAACCAGCCGTTTTTCCTGATTGCCGGACCCTGCGTGGTGGAGTCCGAA CAGCTCCAGATGGACACGGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYLNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIE TRMRKANNFTTGQIYKSVLEKERRGDYLGKTVQVIPHVTNEIQEFIKRGAGYETADAVDVAIVEVGGTVGDIESLPFLEA VRQMSLRMGPNNTAFVHLSYVPWIAAAGELKTKPTQHTAKQLREIGIQADVLLCRADRRIPAEEREKISLFSNVPEWGVI SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPKTEVNIAMVGKYVDLSDSYKSLNEALRHAG MKNHAKVVIEYFDSETITPDNVSRLARFDGILVPGGFGVRGVEGKICAARFARENKIPYLGICLGMQVATIEFARHVAGL KDANSTEFDPATPNPVIALITEWKDADGTIKTRDAKSDLGGTMRLGAQSSDVAKGSLAHKIYGDVVTERHRHRYEANVNY LDALRKSGLVISALTQREHLTEIVELPQDVHPWFVGVQFHPEFKSTPWAGHPLFNAYIAAVLEHRVKAGQDGKATAKALK AVA
Sequences:
>Translated_563_residues MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYLNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIE TRMRKANNFTTGQIYKSVLEKERRGDYLGKTVQVIPHVTNEIQEFIKRGAGYETADAVDVAIVEVGGTVGDIESLPFLEA VRQMSLRMGPNNTAFVHLSYVPWIAAAGELKTKPTQHTAKQLREIGIQADVLLCRADRRIPAEEREKISLFSNVPEWGVI SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPKTEVNIAMVGKYVDLSDSYKSLNEALRHAG MKNHAKVVIEYFDSETITPDNVSRLARFDGILVPGGFGVRGVEGKICAARFARENKIPYLGICLGMQVATIEFARHVAGL KDANSTEFDPATPNPVIALITEWKDADGTIKTRDAKSDLGGTMRLGAQSSDVAKGSLAHKIYGDVVTERHRHRYEANVNY LDALRKSGLVISALTQREHLTEIVELPQDVHPWFVGVQFHPEFKSTPWAGHPLFNAYIAAVLEHRVKAGQDGKATAKALK AVA >Mature_562_residues TKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYLNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIET RMRKANNFTTGQIYKSVLEKERRGDYLGKTVQVIPHVTNEIQEFIKRGAGYETADAVDVAIVEVGGTVGDIESLPFLEAV RQMSLRMGPNNTAFVHLSYVPWIAAAGELKTKPTQHTAKQLREIGIQADVLLCRADRRIPAEEREKISLFSNVPEWGVIS MWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPKTEVNIAMVGKYVDLSDSYKSLNEALRHAGM KNHAKVVIEYFDSETITPDNVSRLARFDGILVPGGFGVRGVEGKICAARFARENKIPYLGICLGMQVATIEFARHVAGLK DANSTEFDPATPNPVIALITEWKDADGTIKTRDAKSDLGGTMRLGAQSSDVAKGSLAHKIYGDVVTERHRHRYEANVNYL DALRKSGLVISALTQREHLTEIVELPQDVHPWFVGVQFHPEFKSTPWAGHPLFNAYIAAVLEHRVKAGQDGKATAKALKA VA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=570, Percent_Identity=44.9122807017544, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI28559085, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-131, Organism=Homo sapiens, GI28559083, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-131, Organism=Homo sapiens, GI221316689, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-131, Organism=Escherichia coli, GI1789142, Length=550, Percent_Identity=59.8181818181818, Blast_Score=673, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=607, Percent_Identity=40.3624382207578, Blast_Score=423, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=42.8822495606327, Blast_Score=443, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322563, Length=575, Percent_Identity=41.9130434782609, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=561, Percent_Identity=44.3850267379679, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI21357815, Length=515, Percent_Identity=42.9126213592233, Blast_Score=400, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 62211; Mature: 62080
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYLNVDPGTMSPFQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIETRMRKANNFTTGQIYKSVLEKERRGDYLGKTVQVIPHVTN EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQEFIKRGAGYETADAVDVAIVEVGGTVGDIESLPFLEAVRQMSLRMGPNNTAFVHLSY HHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPWIAAAGELKTKPTQHTAKQLREIGIQADVLLCRADRRIPAEEREKISLFSNVPEWGVI CCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPKTEVNIAMVG EEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEE KYVDLSDSYKSLNEALRHAGMKNHAKVVIEYFDSETITPDNVSRLARFDGILVPGGFGVR EEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCC GVEGKICAARFARENKIPYLGICLGMQVATIEFARHVAGLKDANSTEFDPATPNPVIALI CCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE TEWKDADGTIKTRDAKSDLGGTMRLGAQSSDVAKGSLAHKIYGDVVTERHRHRYEANVNY EECCCCCCCEEECCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH LDALRKSGLVISALTQREHLTEIVELPQDVHPWFVGVQFHPEFKSTPWAGHPLFNAYIAA HHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH VLEHRVKAGQDGKATAKALKAVA HHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure TKFVFVTGGVVSSLGKGIASASLAAILESRGLKVTLIKLDPYLNVDPGTMSPFQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIETRMRKANNFTTGQIYKSVLEKERRGDYLGKTVQVIPHVTN EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQEFIKRGAGYETADAVDVAIVEVGGTVGDIESLPFLEAVRQMSLRMGPNNTAFVHLSY HHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPWIAAAGELKTKPTQHTAKQLREIGIQADVLLCRADRRIPAEEREKISLFSNVPEWGVI CCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE SMWDVDTIYKVPRMLHEQGLDGLICDKLRLNTPPANLKRWDDLVYETEHPKTEVNIAMVG EEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEE KYVDLSDSYKSLNEALRHAGMKNHAKVVIEYFDSETITPDNVSRLARFDGILVPGGFGVR EEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCC GVEGKICAARFARENKIPYLGICLGMQVATIEFARHVAGLKDANSTEFDPATPNPVIALI CCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE TEWKDADGTIKTRDAKSDLGGTMRLGAQSSDVAKGSLAHKIYGDVVTERHRHRYEANVNY EECCCCCCCEEECCCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH LDALRKSGLVISALTQREHLTEIVELPQDVHPWFVGVQFHPEFKSTPWAGHPLFNAYIAA HHHHHHCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH VLEHRVKAGQDGKATAKALKAVA HHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA