| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is marR [C]
Identifier: 91788979
GI number: 91788979
Start: 3293816
End: 3294271
Strand: Direct
Name: marR [C]
Synonym: Bpro_3119
Alternate gene names: 91788979
Gene position: 3293816-3294271 (Clockwise)
Preceding gene: 91788978
Following gene: 91788980
Centisome position: 63.34
GC content: 63.38
Gene sequence:
>456_bases ATGCCCGAAAAATCTCCCGTCCCCGCCGTCGAGAACGTCAAGACCACTTACCTGGAGAGCCTGATCGGCTACAACGCACG CCGCGCCGCGCTGGTCATCATCGACGCCTTCCTGCAGAAAATGGCCGTCTACGGCTTGCGGCCGGTGGATTTTTCGGTAC TTTCCCTTATCCACCACAACCCCGGTATCACCTCGCGCCAGCTGTGCGCGACGCTCAACATCCAGCCGCCCAATCTGGTG GGCATGATCAAGTCGCTGGAAAACCGCTCACTGCTGACCCGCCGGCCCCATCCCAACGACGGCCGGGCCGTCGGCCTGCA CCTGACCGCCAGCGGGCAGGAACTGATGCACGATGCGGAACGCACGGCACAGGAGCTGGAGTCTGACGCCGCCAGCCGCT TGACGGCGGCCGAGCGCAAGACCCTGATCCGCCTGCTGCAAAAAATCTACCTGTGA
Upstream 100 bases:
>100_bases CTGCGCCACTGGGTACTGCCTGAATTCGACATGCGCATGGGTATCATCAAGGAGCGGCTGGACACCACCTGACCCGGCCA TCTCCTTCATCCTCTACTTC
Downstream 100 bases:
>100_bases GGCCTGGATGCCGCACGCAGGTGGCTCGGCCCGGTGGCCTGGCGTGTCGCCCCTCAACACCCGACACCTTGTGCGTTCAC CGCGGCCTTTGAAGTCTTTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLV GMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL
Sequences:
>Translated_151_residues MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLV GMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL >Mature_150_residues PEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHNPGITSRQLCATLNIQPPNLVG MIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAERTAQELESDAASRLTAAERKTLIRLLQKIYL
Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 16748; Mature: 16617
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHN CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PGITSRQLCATLNIQPPNLVGMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAE CCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHH RTAQELESDAASRLTAAERKTLIRLLQKIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PEKSPVPAVENVKTTYLESLIGYNARRAALVIIDAFLQKMAVYGLRPVDFSVLSLIHHN CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC PGITSRQLCATLNIQPPNLVGMIKSLENRSLLTRRPHPNDGRAVGLHLTASGQELMHDAE CCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHH RTAQELESDAASRLTAAERKTLIRLLQKIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]