| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is adk [H]
Identifier: 91788812
GI number: 91788812
Start: 3112958
End: 3113614
Strand: Direct
Name: adk [H]
Synonym: Bpro_2952
Alternate gene names: 91788812
Gene position: 3112958-3113614 (Clockwise)
Preceding gene: 91788811
Following gene: 91788814
Centisome position: 59.86
GC content: 58.3
Gene sequence:
>657_bases ATGAGACTGATTTTGTTGGGCGCGCCTGGCGCAGGAAAAGGGACGCAAGCGACCTTCATCTGCCAAAAATACGGCATTCC CCAGATTTCCACCGGCGATATGCTTCGTGCAGCCGTCAAGGCAGGAACCCCGTTGGGCGTTGAAGCCAAAAAAATCATGG ATGCTGGCGCGCTTGTCAGTGATGACCTGATCATCAACCTGGTAAAGGAACGTATCGCCCAGCCCGACTGTGCAAAGGGT TTCTTGTTTGACGGTTTTCCCCGCACCATTCCCCAGGCCGACGCCATGAAAGCTGCCGGCGTGAAGATCGACTACGTGCT TGAAATCGATGTGCCTTTTGAAGCCATCATCGAGCGCATGAGCGGGCGCCGCTCACACACGGCATCGGGCCGCACCTACC ACGTGAAATACAACCCGCCCAAGGTCGAAGGCAAGGACGACGTCACCGGTGAGCCGCTGATCCAGCGCGAAGACGACAAG GAAGAGACCGTGCGCAAGCGGCTGGAGGTGTACAGCGCGCAAACCCGCCCCTTGGTGGAGTACTACTCAAGCTGGGCAAA AACTTCGCCCCAGGCAGCCCCCAAATACCGCGCCATCAGCGGCATGGGCGGTGTGGATGAGATCACCGAAAGAGCCTTCC AGGCCCTGTCAAGCTGA
Upstream 100 bases:
>100_bases CGTGACGTGCCCCTCAACACCTGACAAGCAGCCCATGGAGATACCGGCGCGCCGGACTCCCGGGTTGCCTTCCTGAATTC ATAAAAATCCGAGGACATCC
Downstream 100 bases:
>100_bases GGCGACCCGAAAGGCCTTCGGGCCATCCTGAAGACGGCATGGCGCCGGGCCTCAGCCCAGCAAACGAAGCATCAGGTCTA TCCGCGCCTTCACCGGACTC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRLILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVSDDLIINLVKERIAQPDCAKG FLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERMSGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDK EETVRKRLEVYSAQTRPLVEYYSSWAKTSPQAAPKYRAISGMGGVDEITERAFQALSS
Sequences:
>Translated_218_residues MRLILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVSDDLIINLVKERIAQPDCAKG FLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERMSGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDK EETVRKRLEVYSAQTRPLVEYYSSWAKTSPQAAPKYRAISGMGGVDEITERAFQALSS >Mature_218_residues MRLILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVSDDLIINLVKERIAQPDCAKG FLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERMSGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDK EETVRKRLEVYSAQTRPLVEYYSSWAKTSPQAAPKYRAISGMGGVDEITERAFQALSS
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=186, Percent_Identity=48.9247311827957, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI4502013, Length=186, Percent_Identity=48.9247311827957, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI19923437, Length=182, Percent_Identity=47.8021978021978, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI310110345, Length=184, Percent_Identity=41.8478260869565, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI53832003, Length=184, Percent_Identity=41.8478260869565, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI8051579, Length=184, Percent_Identity=41.8478260869565, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI53832001, Length=184, Percent_Identity=41.8478260869565, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI22749187, Length=187, Percent_Identity=30.4812834224599, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI4502011, Length=181, Percent_Identity=32.5966850828729, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI7706497, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI28144899, Length=183, Percent_Identity=26.775956284153, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI28144897, Length=210, Percent_Identity=25.2380952380952, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI237858799, Length=151, Percent_Identity=26.4900662251656, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI21450759, Length=151, Percent_Identity=26.4900662251656, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI1786680, Length=208, Percent_Identity=67.7884615384615, Blast_Score=285, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17552384, Length=186, Percent_Identity=47.8494623655914, Blast_Score=188, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17537943, Length=201, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17567503, Length=208, Percent_Identity=33.1730769230769, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17533833, Length=187, Percent_Identity=28.8770053475936, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17550688, Length=184, Percent_Identity=29.3478260869565, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320432, Length=202, Percent_Identity=47.029702970297, Blast_Score=202, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6321018, Length=186, Percent_Identity=45.1612903225806, Blast_Score=154, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6322828, Length=189, Percent_Identity=29.1005291005291, Blast_Score=84, Evalue=1e-17, Organism=Drosophila melanogaster, GI22026816, Length=183, Percent_Identity=49.7267759562842, Blast_Score=199, Evalue=1e-51, Organism=Drosophila melanogaster, GI17737899, Length=182, Percent_Identity=45.6043956043956, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24645822, Length=182, Percent_Identity=45.6043956043956, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI17647141, Length=213, Percent_Identity=29.5774647887324, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24663208, Length=213, Percent_Identity=29.5774647887324, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23792; Mature: 23792
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVS CEEEEEECCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHH DDLIINLVKERIAQPDCAKGFLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERM HHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHH SGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDKEETVRKRLEVYSAQTRPLVE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH YYSSWAKTSPQAAPKYRAISGMGGVDEITERAFQALSS HHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRLILLGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVS CEEEEEECCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHH DDLIINLVKERIAQPDCAKGFLFDGFPRTIPQADAMKAAGVKIDYVLEIDVPFEAIIERM HHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHH SGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDKEETVRKRLEVYSAQTRPLVE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH YYSSWAKTSPQAAPKYRAISGMGGVDEITERAFQALSS HHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA