| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is gluQ [H]
Identifier: 91788764
GI number: 91788764
Start: 3064188
End: 3065204
Strand: Direct
Name: gluQ [H]
Synonym: Bpro_2904
Alternate gene names: 91788764
Gene position: 3064188-3065204 (Clockwise)
Preceding gene: 91788763
Following gene: 91788765
Centisome position: 58.92
GC content: 66.37
Gene sequence:
>1017_bases ATGGCCGGGGGCGGTGCTGCACGCGAGGTGACGGCCGTGGGAAGCACCTACATTGGCCGGTTTGCCCCCTCACCAACCGG CCCGCTGCACGCAGGCTCGCTGGTGGCCGCATTGGCCAGCTGGCTCGATGCGCGCGCCCACCACGGCCAGTGGCTGGTGC GCATCGAGGATGTCGATACACCCCGTTGCGTACCGGGTGCAGACCAGACCATTCTCGCGCAGCTCGCCGCCTGCGGGCTG ATGCCCGATGAAGCGCCGGTGTACCAGTCGCAGCGCGGCGCCCTGTACCAAAAAGCGCTGGATCAACTCGTGGCACGGCG CCTGGCCTACCCCTGCGCCTGCACGCGGCAGGACATTGCCAGAGCGCACGCCGCCAGCGGGAAGGCGCGGGAACGCCATG GCGAGCTGGTGTATCCCGGCACATGCCGCCAGGGCCTGCACGGCCGCCCTGCACGTGCCTGGCGCTTCCTCACCGAAACA TCGCAAGAAAACACACGGCTGGCCGAATCTCCACAAACAAAGTCAGCTAATAAATCAATAGCAAAAACAATAACAACCGC AGGGACTGCGGGCGAGGTCGCGTGGCACGACAGGCTGCTCGGTCTCCAGACGCAAAACGTGGGCCGCGAGGTCGGCGACT TTGTACTCAAGCGCGCTGATGGCTTCTGGGCCTACCAGCTGGCCGTGGTGGCAGATGACGCCGCCCAAGGCGTCACGGAC GTGGTACGTGGCCAGGACCTGGCCGACAACACGGCGCGGCAAATCCTGTTGCAACGTGCGCTCGGCCTGCCCCAGCCGCG TTACCTGCACACACCGCTGGTACTGGGGTCCAACGGCGAAAAACTGTCCAAGCAAAACGGCGCCCGGCCACTGGACACCA CTCGCCCGCTTGCCGTGCTTCGGCAGGCTGGTCAGCTGCTGGGCCTGCAGGACAATGCGACGGCCAGTACACCGGCGGCA TGGCTGCAGCAGGCTGTGCCCCAGTGGGCAAGCCGTCATGCAGACGCGGCGCACTAA
Upstream 100 bases:
>100_bases GCGCATTGGCGCCTGCGGCGACTGGTGCCTGGGCCATCGGGTTGAAGACGGTTTCCTGTCAGGCCTGGAAATGGCCCTGG CCATCGCTTAGGCAGTGCCT
Downstream 100 bases:
>100_bases AATTGCGTTGTGATTGAAAACCCCTCCCCCAGCGCTGCCAACCTCCCCGAGCACCCGTCCACCGACGCGAGCCACCCCCG CAACATCCGCAGTTTTGTCC
Product: glutamate--tRNA ligase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAGGGAAREVTAVGSTYIGRFAPSPTGPLHAGSLVAALASWLDARAHHGQWLVRIEDVDTPRCVPGADQTILAQLAACGL MPDEAPVYQSQRGALYQKALDQLVARRLAYPCACTRQDIARAHAASGKARERHGELVYPGTCRQGLHGRPARAWRFLTET SQENTRLAESPQTKSANKSIAKTITTAGTAGEVAWHDRLLGLQTQNVGREVGDFVLKRADGFWAYQLAVVADDAAQGVTD VVRGQDLADNTARQILLQRALGLPQPRYLHTPLVLGSNGEKLSKQNGARPLDTTRPLAVLRQAGQLLGLQDNATASTPAA WLQQAVPQWASRHADAAH
Sequences:
>Translated_338_residues MAGGGAAREVTAVGSTYIGRFAPSPTGPLHAGSLVAALASWLDARAHHGQWLVRIEDVDTPRCVPGADQTILAQLAACGL MPDEAPVYQSQRGALYQKALDQLVARRLAYPCACTRQDIARAHAASGKARERHGELVYPGTCRQGLHGRPARAWRFLTET SQENTRLAESPQTKSANKSIAKTITTAGTAGEVAWHDRLLGLQTQNVGREVGDFVLKRADGFWAYQLAVVADDAAQGVTD VVRGQDLADNTARQILLQRALGLPQPRYLHTPLVLGSNGEKLSKQNGARPLDTTRPLAVLRQAGQLLGLQDNATASTPAA WLQQAVPQWASRHADAAH >Mature_337_residues AGGGAAREVTAVGSTYIGRFAPSPTGPLHAGSLVAALASWLDARAHHGQWLVRIEDVDTPRCVPGADQTILAQLAACGLM PDEAPVYQSQRGALYQKALDQLVARRLAYPCACTRQDIARAHAASGKARERHGELVYPGTCRQGLHGRPARAWRFLTETS QENTRLAESPQTKSANKSIAKTITTAGTAGEVAWHDRLLGLQTQNVGREVGDFVLKRADGFWAYQLAVVADDAAQGVTDV VRGQDLADNTARQILLQRALGLPQPRYLHTPLVLGSNGEKLSKQNGARPLDTTRPLAVLRQAGQLLGLQDNATASTPAAW LQQAVPQWASRHADAAH
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=278, Percent_Identity=35.2517985611511, Blast_Score=145, Evalue=7e-35, Organism=Escherichia coli, GI226510925, Length=319, Percent_Identity=42.3197492163009, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1788743, Length=270, Percent_Identity=34.4444444444444, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71993394, Length=278, Percent_Identity=30.9352517985612, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324540, Length=285, Percent_Identity=31.9298245614035, Blast_Score=130, Evalue=2e-31, Organism=Drosophila melanogaster, GI24665321, Length=278, Percent_Identity=35.6115107913669, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 36197; Mature: 36066
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGGAAREVTAVGSTYIGRFAPSPTGPLHAGSLVAALASWLDARAHHGQWLVRIEDVDT CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCC PRCVPGADQTILAQLAACGLMPDEAPVYQSQRGALYQKALDQLVARRLAYPCACTRQDIA CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAHAASGKARERHGELVYPGTCRQGLHGRPARAWRFLTETSQENTRLAESPQTKSANKSI HHHHCCCCHHHHCCCEEECCHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHH AKTITTAGTAGEVAWHDRLLGLQTQNVGREVGDFVLKRADGFWAYQLAVVADDAAQGVTD HHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHH VVRGQDLADNTARQILLQRALGLPQPRYLHTPLVLGSNGEKLSKQNGARPLDTTRPLAVL HHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCCHHHHHCCCCCCCCHHHHHHH RQAGQLLGLQDNATASTPAAWLQQAVPQWASRHADAAH HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AGGGAAREVTAVGSTYIGRFAPSPTGPLHAGSLVAALASWLDARAHHGQWLVRIEDVDT CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCC PRCVPGADQTILAQLAACGLMPDEAPVYQSQRGALYQKALDQLVARRLAYPCACTRQDIA CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAHAASGKARERHGELVYPGTCRQGLHGRPARAWRFLTETSQENTRLAESPQTKSANKSI HHHHCCCCHHHHCCCEEECCHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHH AKTITTAGTAGEVAWHDRLLGLQTQNVGREVGDFVLKRADGFWAYQLAVVADDAAQGVTD HHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHH VVRGQDLADNTARQILLQRALGLPQPRYLHTPLVLGSNGEKLSKQNGARPLDTTRPLAVL HHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCCHHHHHCCCCCCCCHHHHHHH RQAGQLLGLQDNATASTPAAWLQQAVPQWASRHADAAH HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA