| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788717
Identifier: 91788717
GI number: 91788717
Start: 3011543
End: 3012208
Strand: Direct
Name: 91788717
Synonym: Bpro_2856
Alternate gene names: NA
Gene position: 3011543-3012208 (Clockwise)
Preceding gene: 91788716
Following gene: 91788719
Centisome position: 57.91
GC content: 62.61
Gene sequence:
>666_bases ATGAGACTCAATGCTGCCAAATCCTTGATGCCCAACGCTCTCCTGGCCCTGGCACTCGCCGCAGGCAGTCTTTTTTCACC CCTGTCACAAGCCCAGCAGGTGTACCGCATCGTGGGGCCTGACGGCAAAGTGACCTTTTCCGACCAGCCACCACCCGCCT CCAGCAACGCCAAAGTCAGCGGCGCCAACACCAGTCCGGGTGGAAGCGCCGCTCCGACGGGCCTGCCCTTCGAGTTGAGG CAGGTTGCCACCAAATATCCGGTCACGCTGTATTCAGGCGAGAACTGCAGTCCCTGCGGCGCTGCCCGCTCCATGTTGAC CAGCCGCGGCATTCCCTTCACCGAAAAAACGGTCACCACCAATGAGGATATTCAGGCGCTGCAGCGTTTGAGCGGTGCTG CATCGCTGCCATTCGCAACCATCGGAAGCCAGCAACTGAAGGGGTTTTCCGACTCCGAGTGGACACAGTTCCTGAACGCA GCCGGCTACCCGCCGTCGTCGGTCTTGCCTTCCAGCTATCGTCGTCCGGCGCCTACGCCCCTGGTAAGCGTGGCGACCGC GCCTCCCGCGCCGGCGGGCGGCGGAAACCCTGCATTCGTGGAACGCCCAATCCCGGCTCCCGCAGCAACCCAGCCGAACG ATAATCCGGCCGGCATCAAGTTTTAA
Upstream 100 bases:
>100_bases GGAACCTTCCATTGACGCATTGCTGCGTCATCAAGGCATGGGTTAGAAACGTTATAAGCTCTGGACTGAAAAACTTGTAC TTGCGACCAACGGGGAAAAC
Downstream 100 bases:
>100_bases GCACGCTGGCTTGCCACCTCGGGCCAAAAACCGCGGTTAAAACACCAGGGTCCTGACACCGTCCGACGCCCCCAGCAGGC ACACATGAGCCTTCTGGAAG
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRLNAAKSLMPNALLALALAAGSLFSPLSQAQQVYRIVGPDGKVTFSDQPPPASSNAKVSGANTSPGGSAAPTGLPFELR QVATKYPVTLYSGENCSPCGAARSMLTSRGIPFTEKTVTTNEDIQALQRLSGAASLPFATIGSQQLKGFSDSEWTQFLNA AGYPPSSVLPSSYRRPAPTPLVSVATAPPAPAGGGNPAFVERPIPAPAATQPNDNPAGIKF
Sequences:
>Translated_221_residues MRLNAAKSLMPNALLALALAAGSLFSPLSQAQQVYRIVGPDGKVTFSDQPPPASSNAKVSGANTSPGGSAAPTGLPFELR QVATKYPVTLYSGENCSPCGAARSMLTSRGIPFTEKTVTTNEDIQALQRLSGAASLPFATIGSQQLKGFSDSEWTQFLNA AGYPPSSVLPSSYRRPAPTPLVSVATAPPAPAGGGNPAFVERPIPAPAATQPNDNPAGIKF >Mature_221_residues MRLNAAKSLMPNALLALALAAGSLFSPLSQAQQVYRIVGPDGKVTFSDQPPPASSNAKVSGANTSPGGSAAPTGLPFELR QVATKYPVTLYSGENCSPCGAARSMLTSRGIPFTEKTVTTNEDIQALQRLSGAASLPFATIGSQQLKGFSDSEWTQFLNA AGYPPSSVLPSSYRRPAPTPLVSVATAPPAPAGGGNPAFVERPIPAPAATQPNDNPAGIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22695; Mature: 22695
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNAAKSLMPNALLALALAAGSLFSPLSQAQQVYRIVGPDGKVTFSDQPPPASSNAKVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEE GANTSPGGSAAPTGLPFELRQVATKYPVTLYSGENCSPCGAARSMLTSRGIPFTEKTVTT CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC NEDIQALQRLSGAASLPFATIGSQQLKGFSDSEWTQFLNAAGYPPSSVLPSSYRRPAPTP CHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LVSVATAPPAPAGGGNPAFVERPIPAPAATQPNDNPAGIKF EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLNAAKSLMPNALLALALAAGSLFSPLSQAQQVYRIVGPDGKVTFSDQPPPASSNAKVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEE GANTSPGGSAAPTGLPFELRQVATKYPVTLYSGENCSPCGAARSMLTSRGIPFTEKTVTT CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC NEDIQALQRLSGAASLPFATIGSQQLKGFSDSEWTQFLNAAGYPPSSVLPSSYRRPAPTP CHHHHHHHHHHCCCCCCHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LVSVATAPPAPAGGGNPAFVERPIPAPAATQPNDNPAGIKF EEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA