| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788710
Identifier: 91788710
GI number: 91788710
Start: 3002441
End: 3003463
Strand: Direct
Name: 91788710
Synonym: Bpro_2849
Alternate gene names: NA
Gene position: 3002441-3003463 (Clockwise)
Preceding gene: 91788709
Following gene: 91788715
Centisome position: 57.74
GC content: 61.09
Gene sequence:
>1023_bases ATGGGCAGCCTATGGAGTGCGGACAACAGGGGCAAGGTCAGGAGGCTTGCTTTGAGCTCGACTACTCTCGATGCCAACTG CACAGATGGCAACGCCGGCGAGCATGGCGCCAATGAGCTTGAGGTTAGCGTTCACGTGTTTTCCTTTGGTTCGTTGGAGG TAGGGAGTACCGCGAACGCCGACTGTTTCGACGTGCCGGTGCTTGGCAGTGTGCCTGAAGGCACGTACTTATGCTGTGTG ACGCCTAACGTCGTGATCAACAAGCCCGGCGCCGCCAGCGCGATCGGCTTCGGCGATGTGGCCAATGCAAAACCTGACGG CTACAAGGTCGCCGTAGTCAGCGTCAACCTGGTGATCCTGCCGGCGCTGAACCTCATGAAGCTGACCAGCGATGATTTCA TTCCGATCGCTCGCCTGAACTACGACCCCTCGGCGATCACGGTGCGGGCCGATGCTCCCTGGAAGACGATTGAGGAATTC ATTGCCGACGCCAAAAAGCGGCCGGGCGCGATGCAGGTTGGCAACGGCGGTGTCGGCGACATCTGGCATGTGGCAGCCGC CGCTTTTGAGGACCGAACCGGCACCCAGTTCAATCATGTGCCGTTCCAGGGCGCGTCGCCGGCCATTCTCAGCCTGCTGG GTGGCCACGTGGACGCCGTCTCCGTCAGCCCCGGCGAGGTGATGTCGCACGTGCAGAGCGGCAAATTGCGCACGCTGGCG GTGATGTCCGAACAGCGGCTGGGCGGCGTGTTTGCCGATTCGCCGACGCTCAAGGAAAGGAAGATCGACCTCACCATCGG CGTGTGGCGTGGTCTTGCCGTGCCCAAAAATACGCCGCCAGACGTGGTGGATGTGTTGAAGAATGCAGCGCGCAGCACGG CGAGCGACGCGGCTTACAAAGAGACGCTGGTCAAGGCCAACCTGGGTGAGGCTTATCTCGATGCAGCGCCCTTCAAGGCA TCGATCGAGAGGGACCGCGAGTCACTGAAGAAGGTGCTGGCGAAGCTGGTCATCCAGAAGTAA
Upstream 100 bases:
>100_bases ACAACCACAAAAGATTGCACTCGACGCTGGGCTATGTCAGCCCGATGACGTTTGAGCAACGCTGGATCGCGGCCCAGCAG CAAGAAAGAAAGTCCGCATA
Downstream 100 bases:
>100_bases ACGCGACACAAGCGCTTGTCAGGAGCGCACCGTATCGGCCACACGCTCGGCACAGGCCTTGGCCTGCCGGGCGTCGCGCG CTTCAACCATCACCCTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCV TPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEF IADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKA SIERDRESLKKVLAKLVIQK
Sequences:
>Translated_340_residues MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCV TPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEF IADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKA SIERDRESLKKVLAKLVIQK >Mature_339_residues GSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANADCFDVPVLGSVPEGTYLCCVT PNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVILPALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFI ADAKKRPGAMQVGNGGVGDIWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLAV MSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYKETLVKANLGEAYLDAAPFKAS IERDRESLKKVLAKLVIQK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35833; Mature: 35702
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANA CCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCC DCFDVPVLGSVPEGTYLCCVTPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVIL CEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE PALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFIADAKKRPGAMQVGNGGVGD CCCHHEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCH IWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA HHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEE VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYK EEHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH ETLVKANLGEAYLDAAPFKASIERDRESLKKVLAKLVIQK HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GSLWSADNRGKVRRLALSSTTLDANCTDGNAGEHGANELEVSVHVFSFGSLEVGSTANA CCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCC DCFDVPVLGSVPEGTYLCCVTPNVVINKPGAASAIGFGDVANAKPDGYKVAVVSVNLVIL CEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE PALNLMKLTSDDFIPIARLNYDPSAITVRADAPWKTIEEFIADAKKRPGAMQVGNGGVGD CCCHHEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCH IWHVAAAAFEDRTGTQFNHVPFQGASPAILSLLGGHVDAVSVSPGEVMSHVQSGKLRTLA HHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEE VMSEQRLGGVFADSPTLKERKIDLTIGVWRGLAVPKNTPPDVVDVLKNAARSTASDAAYK EEHHHHCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH ETLVKANLGEAYLDAAPFKASIERDRESLKKVLAKLVIQK HHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]