Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is frc [H]

Identifier: 91788665

GI number: 91788665

Start: 2944676

End: 2945923

Strand: Direct

Name: frc [H]

Synonym: Bpro_2803

Alternate gene names: 91788665

Gene position: 2944676-2945923 (Clockwise)

Preceding gene: 91788664

Following gene: 91788666

Centisome position: 56.63

GC content: 63.06

Gene sequence:

>1248_bases
ATGAGCAAAGCGTTAGACGGCGTTCGCATACTTGATTTCACCCACGTCCAGTCGGGCCCCACCTGCACCCAGTTACTGGC
TTGGTTCGGCGCCGACGTGATCAAGGTGGAGCGCGCTGGCGAAGGCGATGCGACGCGCGGGCAGCTGCGTGACATCCCCG
GAGTGGACAGCCTGTATTTCACCATGCTGAACCACAACAAGCGCTCGATTACCCTGGATACCAAGAGTGCCAAGGGCCGG
GAAGTCCTGGACAGGCTCATCAAGCAGTGCGACGTGATGGTTGAAAACTTCGCCCCCGGTGCGCTGGACCGCATGGGCAT
CACCTGGGAACACATCCAGGCCATCAACCCCCGCATGATCGTGGCTTCGGTGAAAGGCTTCGGGCCAGGCCCCTACGAAG
ACTGCAAGGTCTACGAAAACGTCGCCCAGTGCGCCGGCGGCTCCGCCTCGACCACGGGCTTCGACGACGGCCCGCCCATG
GTCACCGGCGCCCAGATCGGCGACAGCGGCACCGGTCTGCACCTGGCGCTGGGCATTGTCGCGGCCCTCTACCAGCGCAA
CACCACGGGCCGCGGCCAGAAGGTTCTGGCCCCGATGCAGGACGCCGTGCTGAACCTGTGCCGCGTCAAGCTGCGCGACC
AGCAGCGCCTGGAGCGCACCCACACCATGCATGAATATCCGCAGTACCCGGATGGCAAATTCGGCGAAGCGGTGCCACGC
GCGGGCAATGCTTCGGGTGGCGGCCAGCCCGGCTCGATCCTGAAGTGCAAGGGCTGGGAAACCGACCCCAACGCCTACAT
TTACTTCATCACGCAAGCGGCCGTGTGGCCCGCCGTGTGCAAGGTGATCGGCGAGGAAGACTGGATCACCGACGAGGCGT
TCGAAACCCCCGCGGCGCGTCTGCTGCACCTCAAGCCGATCTTCGCGCGCATCGAGCAATGGACCATGACCAAGACCAAG
TTCGAGGCCATGGAAATCCTCAACAAGTACGACATTCCCTGCGGACCGATTCTGTCGATGAAGGAGATCGCCGAGGAACC
TGCCCTGCGCGAAACCGGCACCATCGTCGAAGTTGACCATCCCACGCGCGGCAAATACCTGACCGTGGGCAATCCGATCA
AGATGTCGGACAGCCCCACCGAAGTGACGCGCTCTCCCCTGCTGGGCGAACACACCGACGAGGTTCTGGCGCAATTGGGT
TATGGCGCAGGGTATATCGCGGAATTGCGCGCAGAACGGGTGATCTGA

Upstream 100 bases:

>100_bases
AGTGATTAACATAGGGGGATAAACCGGCCGCTTGGGCGTCCGGCACCATGGCTCAAACCGTGTACCAGTAACCGATTCAA
CTTCCCAGCAGGATTTTTTC

Downstream 100 bases:

>100_bases
ACCACGCGCAAAGTACCGGCGAGCCCGCGGCGCGAGCGTCCTGCGAGTCGATTCCAAACAAAATGCAAATGTAAGCGAGC
CCCCATGAACCATCCCATCA

Product: formyl-coenzyme A transferase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSKALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERAGEGDATRGQLRDIPGVDSLYFTMLNHNKRSITLDTKSAKGR
EVLDRLIKQCDVMVENFAPGALDRMGITWEHIQAINPRMIVASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFDDGPPM
VTGAQIGDSGTGLHLALGIVAALYQRNTTGRGQKVLAPMQDAVLNLCRVKLRDQQRLERTHTMHEYPQYPDGKFGEAVPR
AGNASGGGQPGSILKCKGWETDPNAYIYFITQAAVWPAVCKVIGEEDWITDEAFETPAARLLHLKPIFARIEQWTMTKTK
FEAMEILNKYDIPCGPILSMKEIAEEPALRETGTIVEVDHPTRGKYLTVGNPIKMSDSPTEVTRSPLLGEHTDEVLAQLG
YGAGYIAELRAERVI

Sequences:

>Translated_415_residues
MSKALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERAGEGDATRGQLRDIPGVDSLYFTMLNHNKRSITLDTKSAKGR
EVLDRLIKQCDVMVENFAPGALDRMGITWEHIQAINPRMIVASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFDDGPPM
VTGAQIGDSGTGLHLALGIVAALYQRNTTGRGQKVLAPMQDAVLNLCRVKLRDQQRLERTHTMHEYPQYPDGKFGEAVPR
AGNASGGGQPGSILKCKGWETDPNAYIYFITQAAVWPAVCKVIGEEDWITDEAFETPAARLLHLKPIFARIEQWTMTKTK
FEAMEILNKYDIPCGPILSMKEIAEEPALRETGTIVEVDHPTRGKYLTVGNPIKMSDSPTEVTRSPLLGEHTDEVLAQLG
YGAGYIAELRAERVI
>Mature_414_residues
SKALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERAGEGDATRGQLRDIPGVDSLYFTMLNHNKRSITLDTKSAKGRE
VLDRLIKQCDVMVENFAPGALDRMGITWEHIQAINPRMIVASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFDDGPPMV
TGAQIGDSGTGLHLALGIVAALYQRNTTGRGQKVLAPMQDAVLNLCRVKLRDQQRLERTHTMHEYPQYPDGKFGEAVPRA
GNASGGGQPGSILKCKGWETDPNAYIYFITQAAVWPAVCKVIGEEDWITDEAFETPAARLLHLKPIFARIEQWTMTKTKF
EAMEILNKYDIPCGPILSMKEIAEEPALRETGTIVEVDHPTRGKYLTVGNPIKMSDSPTEVTRSPLLGEHTDEVLAQLGY
GAGYIAELRAERVI

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=420, Percent_Identity=30.952380952381, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI300863124, Length=446, Percent_Identity=29.1479820627803, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI42794625, Length=422, Percent_Identity=27.2511848341232, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI266456254, Length=422, Percent_Identity=27.2511848341232, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI300863126, Length=152, Percent_Identity=42.7631578947368, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI13376042, Length=446, Percent_Identity=25.5605381165919, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI266458393, Length=215, Percent_Identity=32.093023255814, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI266458397, Length=215, Percent_Identity=32.093023255814, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI266458395, Length=126, Percent_Identity=35.7142857142857, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI42822893, Length=126, Percent_Identity=35.7142857142857, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1788717, Length=416, Percent_Identity=62.0192307692308, Blast_Score=516, Evalue=1e-147,
Organism=Escherichia coli, GI87082093, Length=394, Percent_Identity=30.2030456852792, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI1786222, Length=423, Percent_Identity=25.0591016548463, Blast_Score=78, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24648431, Length=417, Percent_Identity=32.8537170263789, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI24585488, Length=197, Percent_Identity=30.4568527918782, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 45433; Mature: 45302

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERAGEGDATRGQLRDIPGVDSLYF
CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCCCHHHHH
TMLNHNKRSITLDTKSAKGREVLDRLIKQCDVMVENFAPGALDRMGITWEHIQAINPRMI
HEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCEEE
VASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFDDGPPMVTGAQIGDSGTGLHLALGIV
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCHHHHHHHHH
AALYQRNTTGRGQKVLAPMQDAVLNLCRVKLRDQQRLERTHTMHEYPQYPDGKFGEAVPR
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGNASGGGQPGSILKCKGWETDPNAYIYFITQAAVWPAVCKVIGEEDWITDEAFETPAAR
CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHCCHHHH
LLHLKPIFARIEQWTMTKTKFEAMEILNKYDIPCGPILSMKEIAEEPALRETGTIVEVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEECC
PTRGKYLTVGNPIKMSDSPTEVTRSPLLGEHTDEVLAQLGYGAGYIAELRAERVI
CCCCCEEECCCCEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SKALDGVRILDFTHVQSGPTCTQLLAWFGADVIKVERAGEGDATRGQLRDIPGVDSLYF
CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCCCHHHHH
TMLNHNKRSITLDTKSAKGREVLDRLIKQCDVMVENFAPGALDRMGITWEHIQAINPRMI
HEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCEEE
VASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFDDGPPMVTGAQIGDSGTGLHLALGIV
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCHHHHHHHHH
AALYQRNTTGRGQKVLAPMQDAVLNLCRVKLRDQQRLERTHTMHEYPQYPDGKFGEAVPR
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGNASGGGQPGSILKCKGWETDPNAYIYFITQAAVWPAVCKVIGEEDWITDEAFETPAAR
CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHCCHHHH
LLHLKPIFARIEQWTMTKTKFEAMEILNKYDIPCGPILSMKEIAEEPALRETGTIVEVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEECC
PTRGKYLTVGNPIKMSDSPTEVTRSPLLGEHTDEVLAQLGYGAGYIAELRAERVI
CCCCCEEECCCCEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA