Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is frc [H]

Identifier: 91788663

GI number: 91788663

Start: 2942752

End: 2944023

Strand: Direct

Name: frc [H]

Synonym: Bpro_2801

Alternate gene names: 91788663

Gene position: 2942752-2944023 (Clockwise)

Preceding gene: 91788662

Following gene: 91788664

Centisome position: 56.59

GC content: 62.66

Gene sequence:

>1272_bases
ATGTCAAACAAACCACTCAACGGCATAAAAATTATTGACTTCACCCACGTCCAGGCCGGTCCCGCGTGCACGCAGCTGCT
GGCGTGGTTCGGTGCCGACGTCATCAAGGTCGAACGCCCGGGTTCCGGCGACGTCACCCGCAGCCAGCTGCGCGACATCC
CCGAGGCTGATGCGCTGTACTTCACCATGCTCAACAGCAACAAGCGCGGTCTGACGCTGGACACCAAGAAGGCCGAAGGC
AAGGAGGTGCTCGAGCGGCTGATCAAGGAATCCGACGTCATGGTCGAGAACTTCGGACCCGGCGCGCTGGACCGCATGGG
CTTCACCTGGGAGTACATCCAGAAGCTCAACCCCAAGATGATCCTGGCTTCGGTCAAGGGCTTCAGCGAAGGCCACCACT
ACGAAGACCTCAAGGTCTACGAGAACGTGGCCCAGTGCGCCGGCGGCGCCGCCTCCACCACCGGCTGGTGGAAGGGCGAG
AACTCCGAGCCCACGATTTCCGCTGCTGCCCTGGGTGACACCAACACCGGCATGCACCTGGCCATCGGCATCCTGACGGC
AATCATCGGCCGCCAGCAGACCGGCAAGGGCCAGAAGGTGGCCGTGGCCATGCAGGACGCCGTGCTGAACCTGTGCCGCG
TCAAGATGCGCGACCAGCAGCGCCTGGAGAAGGTGGGCTACCTCGAGGAATACCCGCAGTACCCGCACGAGATGGAAGCT
TTCGCCGACAAGGTGACGCCGCGCGGCGGCAATGCCGGCGGCGGCGGCCAGCCGGGCTGGATCCTGAAGTGCAAGGGCTG
GGAAACCGACCCCAACGCCTACATCTACTTCACGGTCCAGGGCCACGCCTGGGAGCCGATCTGCGACGCACTGGGCAAAC
CAGAGTGGAAGACCGATCCGGCCTACAACACGCCCAAGGGTCGCCAGCCGCACATCATGGACATCTTCGCCACCATCGAA
GACTTCATCAAGGACAAGACCAAGTTCGAAGCGGTCGACATCTTCCGCAAGTTCGACATTCCTTGCGCCCCGGTGCTGTC
CATGAAGGAACTGCTGCGCGACGAGTCGCTGCGCAAGAGCGGCTCCATCGTCGAAGTGCCGCACAAGGTGCGCGGCAGCT
ACTGGACCATCGGCAGCCCGATCAAGTTTTCCGACCTCAAGCCTGAAGTCACGGCGTCTCCCCTGCTGGGCGAGCACACC
GACGAGGTGTTGGCCGAACTGGGCTATAGCAAGGACCAGATCGCAACAATGCACGCCAACAAGGCTGTCTAA

Upstream 100 bases:

>100_bases
AGACAGCCGGCACCGAGAGCGGCCGCATCACCAGCCTGAACCCGCAAAGCGCGGCCAAAAAGAAGTAAATTAGCAAAGCA
ATCCACTAGGAGTTATGAAG

Downstream 100 bases:

>100_bases
AACGGTCATCTGAACAGCGACCCTTCAATGTGGAACGGCGCCCGACCCAGGCGCCGTCTTTACTTCAGAGACCTTTTTTC
AGCACAAGGAGCAGGCCCAT

Product: formyl-coenzyme A transferase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSNKPLNGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGSGDVTRSQLRDIPEADALYFTMLNSNKRGLTLDTKKAEG
KEVLERLIKESDVMVENFGPGALDRMGFTWEYIQKLNPKMILASVKGFSEGHHYEDLKVYENVAQCAGGAASTTGWWKGE
NSEPTISAAALGDTNTGMHLAIGILTAIIGRQQTGKGQKVAVAMQDAVLNLCRVKMRDQQRLEKVGYLEEYPQYPHEMEA
FADKVTPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTVQGHAWEPICDALGKPEWKTDPAYNTPKGRQPHIMDIFATIE
DFIKDKTKFEAVDIFRKFDIPCAPVLSMKELLRDESLRKSGSIVEVPHKVRGSYWTIGSPIKFSDLKPEVTASPLLGEHT
DEVLAELGYSKDQIATMHANKAV

Sequences:

>Translated_423_residues
MSNKPLNGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGSGDVTRSQLRDIPEADALYFTMLNSNKRGLTLDTKKAEG
KEVLERLIKESDVMVENFGPGALDRMGFTWEYIQKLNPKMILASVKGFSEGHHYEDLKVYENVAQCAGGAASTTGWWKGE
NSEPTISAAALGDTNTGMHLAIGILTAIIGRQQTGKGQKVAVAMQDAVLNLCRVKMRDQQRLEKVGYLEEYPQYPHEMEA
FADKVTPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTVQGHAWEPICDALGKPEWKTDPAYNTPKGRQPHIMDIFATIE
DFIKDKTKFEAVDIFRKFDIPCAPVLSMKELLRDESLRKSGSIVEVPHKVRGSYWTIGSPIKFSDLKPEVTASPLLGEHT
DEVLAELGYSKDQIATMHANKAV
>Mature_422_residues
SNKPLNGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGSGDVTRSQLRDIPEADALYFTMLNSNKRGLTLDTKKAEGK
EVLERLIKESDVMVENFGPGALDRMGFTWEYIQKLNPKMILASVKGFSEGHHYEDLKVYENVAQCAGGAASTTGWWKGEN
SEPTISAAALGDTNTGMHLAIGILTAIIGRQQTGKGQKVAVAMQDAVLNLCRVKMRDQQRLEKVGYLEEYPQYPHEMEAF
ADKVTPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTVQGHAWEPICDALGKPEWKTDPAYNTPKGRQPHIMDIFATIED
FIKDKTKFEAVDIFRKFDIPCAPVLSMKELLRDESLRKSGSIVEVPHKVRGSYWTIGSPIKFSDLKPEVTASPLLGEHTD
EVLAELGYSKDQIATMHANKAV

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=410, Percent_Identity=27.8048780487805, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI42794625, Length=425, Percent_Identity=28, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI266456254, Length=425, Percent_Identity=28, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI300863124, Length=436, Percent_Identity=26.8348623853211, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI300863126, Length=156, Percent_Identity=37.8205128205128, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI266458393, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458397, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI13376042, Length=436, Percent_Identity=23.8532110091743, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI266458395, Length=160, Percent_Identity=35, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI42822893, Length=178, Percent_Identity=33.1460674157303, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI1788717, Length=421, Percent_Identity=67.2209026128266, Blast_Score=560, Evalue=1e-161,
Organism=Escherichia coli, GI87082093, Length=412, Percent_Identity=27.9126213592233, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1786222, Length=217, Percent_Identity=27.6497695852535, Blast_Score=81, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24648431, Length=428, Percent_Identity=30.8411214953271, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI24585488, Length=201, Percent_Identity=27.8606965174129, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 46774; Mature: 46643

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKPLNGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGSGDVTRSQLRDIPEADALY
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCEEE
FTMLNSNKRGLTLDTKKAEGKEVLERLIKESDVMVENFGPGALDRMGFTWEYIQKLNPKM
EEEECCCCCCCEEECCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCCCCHHHHHHCCCCE
ILASVKGFSEGHHYEDLKVYENVAQCAGGAASTTGWWKGENSEPTISAAALGDTNTGMHL
EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
AIGILTAIIGRQQTGKGQKVAVAMQDAVLNLCRVKMRDQQRLEKVGYLEEYPQYPHEMEA
HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHH
FADKVTPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTVQGHAWEPICDALGKPEWKTDP
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCC
AYNTPKGRQPHIMDIFATIEDFIKDKTKFEAVDIFRKFDIPCAPVLSMKELLRDESLRKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GSIVEVPHKVRGSYWTIGSPIKFSDLKPEVTASPLLGEHTDEVLAELGYSKDQIATMHAN
CCEEECCHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCC
KAV
CCC
>Mature Secondary Structure 
SNKPLNGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGSGDVTRSQLRDIPEADALY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCEEE
FTMLNSNKRGLTLDTKKAEGKEVLERLIKESDVMVENFGPGALDRMGFTWEYIQKLNPKM
EEEECCCCCCCEEECCCCCHHHHHHHHHHHCCEEEECCCCCHHHHCCCCHHHHHHCCCCE
ILASVKGFSEGHHYEDLKVYENVAQCAGGAASTTGWWKGENSEPTISAAALGDTNTGMHL
EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
AIGILTAIIGRQQTGKGQKVAVAMQDAVLNLCRVKMRDQQRLEKVGYLEEYPQYPHEMEA
HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHH
FADKVTPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTVQGHAWEPICDALGKPEWKTDP
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCC
AYNTPKGRQPHIMDIFATIEDFIKDKTKFEAVDIFRKFDIPCAPVLSMKELLRDESLRKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GSIVEVPHKVRGSYWTIGSPIKFSDLKPEVTASPLLGEHTDEVLAELGYSKDQIATMHAN
CCEEECCHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCC
KAV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA