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The map label for this gene is cbiD

Identifier: 91788638

GI number: 91788638

Start: 2917875

End: 2918996

Strand: Reverse

Name: cbiD

Synonym: Bpro_2776

Alternate gene names: 91788638

Gene position: 2918996-2917875 (Counterclockwise)

Preceding gene: 91788639

Following gene: 91788637

Centisome position: 56.13

GC content: 66.13

Gene sequence:

>1122_bases
ATGATGAAAAAAGACGCGCCCCGCGGCACCCGCACTGGTTTCACCACCGGTGCGTGTTCTGCTGCGGCGGCGCGTGCGGC
GGTGATTGGCCTGGTTACCGGTCAGGTGCCCGACGCGGTGGAATGCCTGCTGCCCAATGGCGACCTGGTGACCTTCGCCG
TGCAGGATGGCCGCGTTGAGGGCGTGGGTGGAGGCGTGGGTGGGGGTGTATCAGCCCACGCCATGGTCATCAAGGACGCG
GGCGATGACCCGGATTGCACCGACAAAGCGCACCTCACCGCCGATGTGCGGCTGCGCCACGATCTGCCGGGCCAGGTGTT
GCTAGCCGGTGGTTTTGGCGTGGGCACGGTCACCATGCCGGGCCTGGGTCTGGCGGTGGGCGGCCCGGCCATCAACCCGG
TGCCGCGCCGCAACATCGAGGCCAATGTGCGTGCCGTGGGGCAGGGCCTGCTGGATGAAGTGGGTCTGGAAGTGACCATT
TCCGTGCCGCAGGGCGAGGAGATGACCAAGAAGACCTTGAACGCGCGGCTGGGCATTCTGGGTGGCATCTCCATCCTGGG
CACTACCGGCATCGTGAAGCCGTATTCCACTGCCGCCTACCGCGCCAGCGTGGTGCAGGGCGTGCAGGTAGCCGGCACGC
TGGGCCACGGCGTGGTGGTGCTCACCACCGGTGGGCGTACCGAAAAGTTTGTGATGGAAGAAATGCCCGAACTGCCCGAA
CCCGCGTTCGTGCAGATGGGCGACTTCCTGCGCTACGCCATGGGTGCGGCAGTCAAGGCGGGCCTGAAGAAAGTCGTCAT
CGGCGGCATGGTCGGCAAGCTCACCAAGATTGCCCAAGGCGAAACCATCACCCACGCGGGCCGGGCCGAGGTGGACACAG
GGTTGCTGGCCGAACTCGCTGCCAGCGTGGGCGCACCGCCCGACGTCTGCGACGCCATCCGTGGCAACGAAACCGCCCGC
TATGCCGGCGAGCGCATGGACGCGCTGGGCCTGGGGCAGGCTTTTCACACCGCGCTGGCGCAGCGGGTCATACAGACCCT
GCGCACGCGTTACCCCGATCAATTTGAACTGAAAGTGCTGGTCTGCGACTTTGACGGTCGCAAGATTGCGGAGGCCTCTT
GA

Upstream 100 bases:

>100_bases
TGCCCTGGGTCGTGATCCGTGGGCGCAAAGGCGGCTCTACCCTGGTGGTGGCAGCCATCCATGCCTTGCTCGGTTTGGCT
GAGGCGAGGGAACTCGCCGC

Downstream 100 bases:

>100_bases
ATTCTGAATCAATCGAAACCATGGAAACCATGGAAGCCATGGAAACCAAGGAAGCCATTGAAAAATGCCGCATCCTCGGC
GTGCTGGACGACGGCATCAA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MMKKDAPRGTRTGFTTGACSAAAARAAVIGLVTGQVPDAVECLLPNGDLVTFAVQDGRVEGVGGGVGGGVSAHAMVIKDA
GDDPDCTDKAHLTADVRLRHDLPGQVLLAGGFGVGTVTMPGLGLAVGGPAINPVPRRNIEANVRAVGQGLLDEVGLEVTI
SVPQGEEMTKKTLNARLGILGGISILGTTGIVKPYSTAAYRASVVQGVQVAGTLGHGVVVLTTGGRTEKFVMEEMPELPE
PAFVQMGDFLRYAMGAAVKAGLKKVVIGGMVGKLTKIAQGETITHAGRAEVDTGLLAELAASVGAPPDVCDAIRGNETAR
YAGERMDALGLGQAFHTALAQRVIQTLRTRYPDQFELKVLVCDFDGRKIAEAS

Sequences:

>Translated_373_residues
MMKKDAPRGTRTGFTTGACSAAAARAAVIGLVTGQVPDAVECLLPNGDLVTFAVQDGRVEGVGGGVGGGVSAHAMVIKDA
GDDPDCTDKAHLTADVRLRHDLPGQVLLAGGFGVGTVTMPGLGLAVGGPAINPVPRRNIEANVRAVGQGLLDEVGLEVTI
SVPQGEEMTKKTLNARLGILGGISILGTTGIVKPYSTAAYRASVVQGVQVAGTLGHGVVVLTTGGRTEKFVMEEMPELPE
PAFVQMGDFLRYAMGAAVKAGLKKVVIGGMVGKLTKIAQGETITHAGRAEVDTGLLAELAASVGAPPDVCDAIRGNETAR
YAGERMDALGLGQAFHTALAQRVIQTLRTRYPDQFELKVLVCDFDGRKIAEAS
>Mature_373_residues
MMKKDAPRGTRTGFTTGACSAAAARAAVIGLVTGQVPDAVECLLPNGDLVTFAVQDGRVEGVGGGVGGGVSAHAMVIKDA
GDDPDCTDKAHLTADVRLRHDLPGQVLLAGGFGVGTVTMPGLGLAVGGPAINPVPRRNIEANVRAVGQGLLDEVGLEVTI
SVPQGEEMTKKTLNARLGILGGISILGTTGIVKPYSTAAYRASVVQGVQVAGTLGHGVVVLTTGGRTEKFVMEEMPELPE
PAFVQMGDFLRYAMGAAVKAGLKKVVIGGMVGKLTKIAQGETITHAGRAEVDTGLLAELAASVGAPPDVCDAIRGNETAR
YAGERMDALGLGQAFHTALAQRVIQTLRTRYPDQFELKVLVCDFDGRKIAEAS

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBID_POLSJ (Q129V0)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_549590.1
- ProteinModelPortal:   Q129V0
- SMR:   Q129V0
- STRING:   Q129V0
- GeneID:   4014580
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_2776
- NMPDR:   fig|296591.1.peg.5364
- eggNOG:   COG1903
- HOGENOM:   HBG705387
- OMA:   RRGWTTG
- ProtClustDB:   PRK00075
- BioCyc:   PSP296591:BPRO_2776-MONOMER
- HAMAP:   MF_00787
- InterPro:   IPR002748
- PIRSF:   PIRSF026782
- TIGRFAMs:   TIGR00312

Pfam domain/function: PF01888 CbiD; SSF111342 Cbl_biosynth_CbiD

EC number: NA

Molecular weight: Translated: 38373; Mature: 38373

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKDAPRGTRTGFTTGACSAAAARAAVIGLVTGQVPDAVECLLPNGDLVTFAVQDGRVE
CCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCHHEEECCCCCEEEEEEECCEEE
GVGGGVGGGVSAHAMVIKDAGDDPDCTDKAHLTADVRLRHDLPGQVLLAGGFGVGTVTMP
ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCEEECC
GLGLAVGGPAINPVPRRNIEANVRAVGQGLLDEVGLEVTISVPQGEEMTKKTLNARLGIL
CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH
GGISILGTTGIVKPYSTAAYRASVVQGVQVAGTLGHGVVVLTTGGRTEKFVMEEMPELPE
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHHHHHHCCCCCC
PAFVQMGDFLRYAMGAAVKAGLKKVVIGGMVGKLTKIAQGETITHAGRAEVDTGLLAELA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
ASVGAPPDVCDAIRGNETARYAGERMDALGLGQAFHTALAQRVIQTLRTRYPDQFELKVL
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VCDFDGRKIAEAS
EEECCCCEECCCC
>Mature Secondary Structure
MMKKDAPRGTRTGFTTGACSAAAARAAVIGLVTGQVPDAVECLLPNGDLVTFAVQDGRVE
CCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCHHEEECCCCCEEEEEEECCEEE
GVGGGVGGGVSAHAMVIKDAGDDPDCTDKAHLTADVRLRHDLPGQVLLAGGFGVGTVTMP
ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCEEECC
GLGLAVGGPAINPVPRRNIEANVRAVGQGLLDEVGLEVTISVPQGEEMTKKTLNARLGIL
CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH
GGISILGTTGIVKPYSTAAYRASVVQGVQVAGTLGHGVVVLTTGGRTEKFVMEEMPELPE
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCHHHHHHHCCCCCC
PAFVQMGDFLRYAMGAAVKAGLKKVVIGGMVGKLTKIAQGETITHAGRAEVDTGLLAELA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHH
ASVGAPPDVCDAIRGNETARYAGERMDALGLGQAFHTALAQRVIQTLRTRYPDQFELKVL
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VCDFDGRKIAEAS
EEECCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA