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The map label for this gene is yfdE [H]

Identifier: 91788613

GI number: 91788613

Start: 2891402

End: 2892652

Strand: Reverse

Name: yfdE [H]

Synonym: Bpro_2751

Alternate gene names: 91788613

Gene position: 2892652-2891402 (Counterclockwise)

Preceding gene: 91788614

Following gene: 91788612

Centisome position: 55.63

GC content: 64.59

Gene sequence:

>1251_bases
GTGATAGATGCGTCAACGAATCAGGCGGCGAAGGATGCGGCGAGCGGTGCAGGGCGGCCGCTGCCGCTGGCCGGCGTCCG
GGTGCTCGATGTCAGCCAGGTGATGGCAGGCCCTTATGCCTGCATGCTGCTGGCCGACATGGGGGCCGATGTCGTCAAGA
TCGAACCCCCCGGGGGGGGCGACCAGACGCGCGGCGCCATGGGATTCAAGATGAAGGGCCCCGACAGCCTGGGCTTCCTG
AACATGAACCGCAACAAGCGGAGCATGGTGCTGAACCTCAAGTCCGAAGCCGGGCGGGAGGTGTTGCGAAAAATGGTCAA
GGACGCCGACATCCTGATCGAGAACTACCGGCCCGGCGCGATGAAGCGCCTGGGCCTGGGCTATGAAGACTTGAAGGGCG
TCAACCCGCGCCTGGTCTACACCAGCATTTCGGGCTTTGGCCAGACCGGGCCCTGGGCCGACCGGCCGGGCTTCGACCTG
ATGGCGCAGGCCATGTCGGGTGTGATGAGCGTGACCGGCTATCCGGGCGGTCCGCCCGTCAAGGCCGGAGTGCCCGTGGC
CGACATCGGCTGTGCGCTGTTTGCCATCTATGCCACGCTGTCCGCCTACATTGGCGTCAAAGCCGGTGGCCAGGGCCAGT
ACATCGATGCTTCGCTGTTTGATTCGGCCATGGCGTTTTCGATCTGGGATGTCTGCGATTACTGGGGCACCGGACGCCCG
CCCGAGCCGCTGGGCACGTCCAACAAGATGACCGCGCCCTACCAGGCCATGGCCAGTTCAGATGGTTACTTCGTCATGGG
CGCGAACAACCAGAAGCTGTGGCAACTGCTGTGCCAGGTGATGGATCGTCCGGAGTTGCTGGAAGACGGCCGCTTCAGCA
CCATCTCGTTGCGCCTGGCGAACCGGGCCGCGCTCGAAGAAGAGCTTGAGCGCAGCTTTCGCCAGCACCCCAAGGCTTAC
TGGGTGGACACCTTGCTGGCGGCAGGCATCCCGGCCGGCCCCATCCTCAGCTACCCCGAGGCCTTTGAAAGCGAGCATGG
CCGCGCCCGTGGCATGCGCATGGAAATCGATCACCCCATTGAAGGCACCGTGCCGAACATCGGCTTTGCGGTCAAGATGT
CGGGCACGCCGCAGCAGGTCAGGCGCCATCCGCCGCTGCTGGGTGAACACACGCAGGACGTCCTGGACGAGTTGGGCCTG
AGTGATGCCGAATGTGCCGAGCTGCAGGCACAGGGGGCATTTGCAGCATGA

Upstream 100 bases:

>100_bases
GGCCAAGGTCGTGAAAGACGCCGGCGTCAAGAGCGAGGCGTGAGCGGCATGCCGCTGCAGCTTGCAGCATTGTTTTGAAA
ACCAGGCAAGGAGCTACTGA

Downstream 100 bases:

>100_bases
GTGACGGAGCAGTACACCTGACGGTCAATGCCGGCGTGGCGTCGGTGGTGTTCGACCGTCCGCAGGCGCGCAATGCCATG
ACCTGGGCCATGTACAGGCA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MIDASTNQAAKDAASGAGRPLPLAGVRVLDVSQVMAGPYACMLLADMGADVVKIEPPGGGDQTRGAMGFKMKGPDSLGFL
NMNRNKRSMVLNLKSEAGREVLRKMVKDADILIENYRPGAMKRLGLGYEDLKGVNPRLVYTSISGFGQTGPWADRPGFDL
MAQAMSGVMSVTGYPGGPPVKAGVPVADIGCALFAIYATLSAYIGVKAGGQGQYIDASLFDSAMAFSIWDVCDYWGTGRP
PEPLGTSNKMTAPYQAMASSDGYFVMGANNQKLWQLLCQVMDRPELLEDGRFSTISLRLANRAALEEELERSFRQHPKAY
WVDTLLAAGIPAGPILSYPEAFESEHGRARGMRMEIDHPIEGTVPNIGFAVKMSGTPQQVRRHPPLLGEHTQDVLDELGL
SDAECAELQAQGAFAA

Sequences:

>Translated_416_residues
MIDASTNQAAKDAASGAGRPLPLAGVRVLDVSQVMAGPYACMLLADMGADVVKIEPPGGGDQTRGAMGFKMKGPDSLGFL
NMNRNKRSMVLNLKSEAGREVLRKMVKDADILIENYRPGAMKRLGLGYEDLKGVNPRLVYTSISGFGQTGPWADRPGFDL
MAQAMSGVMSVTGYPGGPPVKAGVPVADIGCALFAIYATLSAYIGVKAGGQGQYIDASLFDSAMAFSIWDVCDYWGTGRP
PEPLGTSNKMTAPYQAMASSDGYFVMGANNQKLWQLLCQVMDRPELLEDGRFSTISLRLANRAALEEELERSFRQHPKAY
WVDTLLAAGIPAGPILSYPEAFESEHGRARGMRMEIDHPIEGTVPNIGFAVKMSGTPQQVRRHPPLLGEHTQDVLDELGL
SDAECAELQAQGAFAA
>Mature_416_residues
MIDASTNQAAKDAASGAGRPLPLAGVRVLDVSQVMAGPYACMLLADMGADVVKIEPPGGGDQTRGAMGFKMKGPDSLGFL
NMNRNKRSMVLNLKSEAGREVLRKMVKDADILIENYRPGAMKRLGLGYEDLKGVNPRLVYTSISGFGQTGPWADRPGFDL
MAQAMSGVMSVTGYPGGPPVKAGVPVADIGCALFAIYATLSAYIGVKAGGQGQYIDASLFDSAMAFSIWDVCDYWGTGRP
PEPLGTSNKMTAPYQAMASSDGYFVMGANNQKLWQLLCQVMDRPELLEDGRFSTISLRLANRAALEEELERSFRQHPKAY
WVDTLLAAGIPAGPILSYPEAFESEHGRARGMRMEIDHPIEGTVPNIGFAVKMSGTPQQVRRHPPLLGEHTQDVLDELGL
SDAECAELQAQGAFAA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=393, Percent_Identity=36.8956743002545, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI300863124, Length=419, Percent_Identity=35.3221957040573, Blast_Score=275, Evalue=5e-74,
Organism=Homo sapiens, GI300863126, Length=393, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI13376042, Length=419, Percent_Identity=32.9355608591885, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI42794625, Length=398, Percent_Identity=28.894472361809, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI266456254, Length=398, Percent_Identity=28.894472361809, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI266458393, Length=275, Percent_Identity=32.3636363636364, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI266458397, Length=266, Percent_Identity=32.7067669172932, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI266458395, Length=148, Percent_Identity=39.1891891891892, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI42822893, Length=148, Percent_Identity=39.1891891891892, Blast_Score=103, Evalue=4e-22,
Organism=Escherichia coli, GI87082093, Length=334, Percent_Identity=38.3233532934132, Blast_Score=264, Evalue=9e-72,
Organism=Escherichia coli, GI1788717, Length=418, Percent_Identity=30.8612440191388, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1786222, Length=403, Percent_Identity=27.0471464019851, Blast_Score=102, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI32564160, Length=323, Percent_Identity=26.0061919504644, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI115535051, Length=323, Percent_Identity=24.7678018575851, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24648431, Length=390, Percent_Identity=37.4358974358974, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24585488, Length=337, Percent_Identity=29.080118694362, Blast_Score=128, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 44627; Mature: 44627

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDASTNQAAKDAASGAGRPLPLAGVRVLDVSQVMAGPYACMLLADMGADVVKIEPPGGG
CCCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHCCCCEEEEECCCCC
DQTRGAMGFKMKGPDSLGFLNMNRNKRSMVLNLKSEAGREVLRKMVKDADILIENYRPGA
CCCCCCCCEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCH
MKRLGLGYEDLKGVNPRLVYTSISGFGQTGPWADRPGFDLMAQAMSGVMSVTGYPGGPPV
HHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCC
KAGVPVADIGCALFAIYATLSAYIGVKAGGQGQYIDASLFDSAMAFSIWDVCDYWGTGRP
CCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCC
PEPLGTSNKMTAPYQAMASSDGYFVMGANNQKLWQLLCQVMDRPELLEDGRFSTISLRLA
CCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCEEEEEEEHH
NRAALEEELERSFRQHPKAYWVDTLLAAGIPAGPILSYPEAFESEHGRARGMRMEIDHPI
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHCCCEEECCCCC
EGTVPNIGFAVKMSGTPQQVRRHPPLLGEHTQDVLDELGLSDAECAELQAQGAFAA
CCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MIDASTNQAAKDAASGAGRPLPLAGVRVLDVSQVMAGPYACMLLADMGADVVKIEPPGGG
CCCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHCCCCEEEEECCCCC
DQTRGAMGFKMKGPDSLGFLNMNRNKRSMVLNLKSEAGREVLRKMVKDADILIENYRPGA
CCCCCCCCEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCH
MKRLGLGYEDLKGVNPRLVYTSISGFGQTGPWADRPGFDLMAQAMSGVMSVTGYPGGPPV
HHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCC
KAGVPVADIGCALFAIYATLSAYIGVKAGGQGQYIDASLFDSAMAFSIWDVCDYWGTGRP
CCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCC
PEPLGTSNKMTAPYQAMASSDGYFVMGANNQKLWQLLCQVMDRPELLEDGRFSTISLRLA
CCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCEEEEEEEHH
NRAALEEELERSFRQHPKAYWVDTLLAAGIPAGPILSYPEAFESEHGRARGMRMEIDHPI
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHCCCEEECCCCC
EGTVPNIGFAVKMSGTPQQVRRHPPLLGEHTQDVLDELGLSDAECAELQAQGAFAA
CCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]