| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788607
Identifier: 91788607
GI number: 91788607
Start: 2885948
End: 2887078
Strand: Reverse
Name: 91788607
Synonym: Bpro_2745
Alternate gene names: NA
Gene position: 2887078-2885948 (Counterclockwise)
Preceding gene: 91788608
Following gene: 91788606
Centisome position: 55.52
GC content: 63.93
Gene sequence:
>1131_bases ATGAGTCAAGGACGACAAGCGCAGGCGGTCAAACTATCCAGACAAGAGCGTAAGTCGCTGGAGTTGTTGACCCGGCGAGG AACGGCGCAGCAGCGACAGGTTGTCCGCGCGAAGATCGCGCTTATGGCCCATCAAGGGGAGACGACCACGGCGATTGCGG ACGCGCTGGGCGTGTCGGTGCAGACTGTCTCGCATTGGCGCAGCCGCCTGGCCAAGCGTGGCGTTGAAGGGTTGCAAGAA GCGGCACGCCCGGGTCGGCCCAGGCGCATCGGCCAGACGCAGCGGCTGGAGTTGCTGGCCTTGGCGTGTGAGCCCGCTCA AGCGCAGGGCAGAGCAACGCCGACGCTGGACGAGATGGTTGAGCGCGCTGCCCTGCGCGGTGTGGTCAAGCAGATCAGCC GCAGCCACCTGCAGCGCATCCTGCAGGCCGGCGACATGCGCCCGCATCGTGTTCGGCAGTGGCTGCACAGCCCCGACCCG CAGTTTCGGCAAAAGGTCAATGAGATCTGCGCGTTGTACCGCCAGGCGCCCAAAGGTTCGGTCGTGCTGTCGGTCGATGA GAAAACCGGGATCCAGGCGATCGAGCGCAAGCACGCGGATCGCGCACCGGCGCCGGGCCGCGCGCGTCGGCGCGAATTCG AATACATCCGTCACGGCACGCAGGCCCTCATCGCCGCCATGGACGTGCACTCGGGACGCGTCATCGGCAGTTGCTCCGAT CGTCGCACGCAAGCCGACCTGGTGGCCTTCATGGAGCAGGTTGCGCAGGCCTACCCCAAAGGCCGGGTGCACATCGTGTG GGACAACCTCAACACCCACCGGGCGCAGGCCGTATGGGAGGATTTCAATGTCCGACACGATCACCGCTTTGTCTTTCACT TCACACCACTGCACGCCAGCTGGGTCAATCAGATCGAGCTGCTGTTCGGCATCTACGCGCGCCGCGTGCTGCGACACGCC AGTCATTCGTCCATCCAGCACTTGCGCGAGCGCACCGAGGCCTTCATGAACAAGCGCAATCAGGCGCCCAAGCCTTTTAA ATGGACATTCGCCGGCTTTGAGCTGCAAACTGGCGAACCCCTGAGATTCAACGACCATGCCCACCTTCGACGCACAACTA AAGGCCGCTGA
Upstream 100 bases:
>100_bases ACTGTTCGAGCGATGGAGATGAGTAACGCTGAATACGACACTAGTACAACATCCCGTAAATGTCTTTCATATAAATGGCC ATTGAGTTATTCTCTGGTGC
Downstream 100 bases:
>100_bases GCTTCAGCGCCAACTCGCAACGCTCACCGGCCACGACCTGGCCCACGTGAAACCCTATGGCAAGCATCTGCTGATCCAGA TGCACCGTGACGACAACGTT
Product: putative transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Isrso5-Transposase Protein; ISMsm5 Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Transposase; Aminoglycoside Phosphotransferase; ISPsy1 Transposase; Inactivated Transposase; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; Transposase Fragment
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSQGRQAQAVKLSRQERKSLELLTRRGTAQQRQVVRAKIALMAHQGETTTAIADALGVSVQTVSHWRSRLAKRGVEGLQE AARPGRPRRIGQTQRLELLALACEPAQAQGRATPTLDEMVERAALRGVVKQISRSHLQRILQAGDMRPHRVRQWLHSPDP QFRQKVNEICALYRQAPKGSVVLSVDEKTGIQAIERKHADRAPAPGRARRREFEYIRHGTQALIAAMDVHSGRVIGSCSD RRTQADLVAFMEQVAQAYPKGRVHIVWDNLNTHRAQAVWEDFNVRHDHRFVFHFTPLHASWVNQIELLFGIYARRVLRHA SHSSIQHLRERTEAFMNKRNQAPKPFKWTFAGFELQTGEPLRFNDHAHLRRTTKGR
Sequences:
>Translated_376_residues MSQGRQAQAVKLSRQERKSLELLTRRGTAQQRQVVRAKIALMAHQGETTTAIADALGVSVQTVSHWRSRLAKRGVEGLQE AARPGRPRRIGQTQRLELLALACEPAQAQGRATPTLDEMVERAALRGVVKQISRSHLQRILQAGDMRPHRVRQWLHSPDP QFRQKVNEICALYRQAPKGSVVLSVDEKTGIQAIERKHADRAPAPGRARRREFEYIRHGTQALIAAMDVHSGRVIGSCSD RRTQADLVAFMEQVAQAYPKGRVHIVWDNLNTHRAQAVWEDFNVRHDHRFVFHFTPLHASWVNQIELLFGIYARRVLRHA SHSSIQHLRERTEAFMNKRNQAPKPFKWTFAGFELQTGEPLRFNDHAHLRRTTKGR >Mature_375_residues SQGRQAQAVKLSRQERKSLELLTRRGTAQQRQVVRAKIALMAHQGETTTAIADALGVSVQTVSHWRSRLAKRGVEGLQEA ARPGRPRRIGQTQRLELLALACEPAQAQGRATPTLDEMVERAALRGVVKQISRSHLQRILQAGDMRPHRVRQWLHSPDPQ FRQKVNEICALYRQAPKGSVVLSVDEKTGIQAIERKHADRAPAPGRARRREFEYIRHGTQALIAAMDVHSGRVIGSCSDR RTQADLVAFMEQVAQAYPKGRVHIVWDNLNTHRAQAVWEDFNVRHDHRFVFHFTPLHASWVNQIELLFGIYARRVLRHAS HSSIQHLRERTEAFMNKRNQAPKPFKWTFAGFELQTGEPLRFNDHAHLRRTTKGR
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43002; Mature: 42871
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: PS00622 HTH_LUXR_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGRQAQAVKLSRQERKSLELLTRRGTAQQRQVVRAKIALMAHQGETTTAIADALGVSV CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH QTVSHWRSRLAKRGVEGLQEAARPGRPRRIGQTQRLELLALACEPAQAQGRATPTLDEMV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCHHCCCCCCCCHHHHH ERAALRGVVKQISRSHLQRILQAGDMRPHRVRQWLHSPDPQFRQKVNEICALYRQAPKGS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC VVLSVDEKTGIQAIERKHADRAPAPGRARRREFEYIRHGTQALIAAMDVHSGRVIGSCSD EEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC RRTQADLVAFMEQVAQAYPKGRVHIVWDNLNTHRAQAVWEDFNVRHDHRFVFHFTPLHAS HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHH WVNQIELLFGIYARRVLRHASHSSIQHLRERTEAFMNKRNQAPKPFKWTFAGFELQTGEP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCC LRFNDHAHLRRTTKGR CEECCCHHHHHCCCCC >Mature Secondary Structure SQGRQAQAVKLSRQERKSLELLTRRGTAQQRQVVRAKIALMAHQGETTTAIADALGVSV CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH QTVSHWRSRLAKRGVEGLQEAARPGRPRRIGQTQRLELLALACEPAQAQGRATPTLDEMV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCHHCCCCCCCCHHHHH ERAALRGVVKQISRSHLQRILQAGDMRPHRVRQWLHSPDPQFRQKVNEICALYRQAPKGS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC VVLSVDEKTGIQAIERKHADRAPAPGRARRREFEYIRHGTQALIAAMDVHSGRVIGSCSD EEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC RRTQADLVAFMEQVAQAYPKGRVHIVWDNLNTHRAQAVWEDFNVRHDHRFVFHFTPLHAS HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHH WVNQIELLFGIYARRVLRHASHSSIQHLRERTEAFMNKRNQAPKPFKWTFAGFELQTGEP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCC LRFNDHAHLRRTTKGR CEECCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA