| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hisJ [H]
Identifier: 91788587
GI number: 91788587
Start: 2872111
End: 2872878
Strand: Direct
Name: hisJ [H]
Synonym: Bpro_2725
Alternate gene names: 91788587
Gene position: 2872111-2872878 (Clockwise)
Preceding gene: 91788586
Following gene: 91788588
Centisome position: 55.23
GC content: 62.63
Gene sequence:
>768_bases ATGAATCTCTTGCAAAAAATAGCGGCTACGGCCGGACTGTTCACACTCGCGCTGGGCGGCGTCCATGCCCAGAACACCGA GCTGGTGGTCGGCTCCAGCGCCACCTACCGGCCGTTTGCCTATGAAAGCCCGAGCAAGGACATCGTCGGCTACGACGTGG ACATGATCAAGGCCATCGCCCAGAAGGCTGGCCTGAAGATCAAGATCGTCAACACGCCCTGGACCGGCATCTTCGCCGCC CTCAACAACGGCGACCTGGACCTGGTGATCTCCGGCGTGACCATCAACGACAAGCGCAAGCAGTCCTACGACTTCAGCAC CCCCTACTTCGAGGCGCGCCAGCTGCTCGCCGTGCACAGCAACAGCACCGCCAAAGGCCTGAAGGACCTGGCCGGCAAAA AGATCGGTGTGGTCACCGGCAGCACTGGCGACGACATGGCCTCGCGCGAGTTCGGCAAGACCAACCCCGACATCCGCCGC TTCGAGAGCACGCCCGTGGTGATCTCCGAGCTGGCCAACAACGGCCTGGATGCGGCCATCGGCGACAACGGCGTCATTGC CTTCCGCGCCCAGGAGCACAAGCAGCTCAAGACCGTCAGCGACCCGGCCTTTCCCAAGGAGTACTTCGGCATCGTCGTCA AGCAGGGCAACAAGGCCTTGCTGGACAAGCTCAACGCCGGCCTGGCCGCGGTGAAAGCCGACGGAAGCTACGCGCAGATC TACAAGAAGTGGTTCCAGGCTGAAGCCCCCGTGCTACCGGCCCAATAA
Upstream 100 bases:
>100_bases GTGCCCGGCTTGGCACGCGTTACCATTGGCATCTTTTCGATTTGCGGCCCTCAGCGGGCCGCTTGATGCGTTTTCCACCC CCACCTGTTTGGACTTACCC
Downstream 100 bases:
>100_bases GCACTGAGCCCAAGCTTTCCTTATGGAGCAAGTCCTCTGGTTCGGCTGGTTTCGCGCCGACATCATTTCGGAATACGCCG TGCTGTTCTGGCGCGGCCTG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNLLQKIAATAGLFTLALGGVHAQNTELVVGSSATYRPFAYESPSKDIVGYDVDMIKAIAQKAGLKIKIVNTPWTGIFAA LNNGDLDLVISGVTINDKRKQSYDFSTPYFEARQLLAVHSNSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPDIRR FESTPVVISELANNGLDAAIGDNGVIAFRAQEHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGLAAVKADGSYAQI YKKWFQAEAPVLPAQ
Sequences:
>Translated_255_residues MNLLQKIAATAGLFTLALGGVHAQNTELVVGSSATYRPFAYESPSKDIVGYDVDMIKAIAQKAGLKIKIVNTPWTGIFAA LNNGDLDLVISGVTINDKRKQSYDFSTPYFEARQLLAVHSNSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPDIRR FESTPVVISELANNGLDAAIGDNGVIAFRAQEHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGLAAVKADGSYAQI YKKWFQAEAPVLPAQ >Mature_255_residues MNLLQKIAATAGLFTLALGGVHAQNTELVVGSSATYRPFAYESPSKDIVGYDVDMIKAIAQKAGLKIKIVNTPWTGIFAA LNNGDLDLVISGVTINDKRKQSYDFSTPYFEARQLLAVHSNSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPDIRR FESTPVVISELANNGLDAAIGDNGVIAFRAQEHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGLAAVKADGSYAQI YKKWFQAEAPVLPAQ
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=233, Percent_Identity=33.9055793991416, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787085, Length=248, Percent_Identity=31.4516129032258, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=30.4932735426009, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1787088, Length=249, Percent_Identity=28.9156626506024, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1788649, Length=224, Percent_Identity=26.7857142857143, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1788648, Length=224, Percent_Identity=24.5535714285714, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27335; Mature: 27335
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLQKIAATAGLFTLALGGVHAQNTELVVGSSATYRPFAYESPSKDIVGYDVDMIKAIA CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH QKAGLKIKIVNTPWTGIFAALNNGDLDLVISGVTINDKRKQSYDFSTPYFEARQLLAVHS HHCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHEEEECC NSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPDIRRFESTPVVISELANNGLDAAI CCHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCEEE GDNGVIAFRAQEHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGLAAVKADGSYAQI CCCCEEEEEECCHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHCCCEEEEECCCCHHHH YKKWFQAEAPVLPAQ HHHHHHCCCCCCCCC >Mature Secondary Structure MNLLQKIAATAGLFTLALGGVHAQNTELVVGSSATYRPFAYESPSKDIVGYDVDMIKAIA CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH QKAGLKIKIVNTPWTGIFAALNNGDLDLVISGVTINDKRKQSYDFSTPYFEARQLLAVHS HHCCCEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHEEEECC NSTAKGLKDLAGKKIGVVTGSTGDDMASREFGKTNPDIRRFESTPVVISELANNGLDAAI CCHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCHHHHCCCCHHHHHHHCCCCCEEE GDNGVIAFRAQEHKQLKTVSDPAFPKEYFGIVVKQGNKALLDKLNAGLAAVKADGSYAQI CCCCEEEEEECCHHHHHHCCCCCCCHHHEEEEEECCCHHHHHHHCCCEEEEECCCCHHHH YKKWFQAEAPVLPAQ HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]