| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yghX [H]
Identifier: 91788586
GI number: 91788586
Start: 2871024
End: 2871923
Strand: Direct
Name: yghX [H]
Synonym: Bpro_2724
Alternate gene names: 91788586
Gene position: 2871024-2871923 (Clockwise)
Preceding gene: 91788583
Following gene: 91788587
Centisome position: 55.21
GC content: 62.67
Gene sequence:
>900_bases ATGACCCGAAAGACTGCCCAGGATTTTGACCAGGAACTGCTGATTCTGTTTGATGCCTATGTGCATGGCACGATAGACCG GCGCGGCTTTCTGGAGCGTGCCCAGAAATTTGCCACTGCTGGCATGACGGCCGGCGCGTTGCTCGCCGCCCTGAGCCCCA ACTTTGCCGCGGGGCAACAGGTACCCAAAGACGACAGGCGGCTCAAGACCGCCATGCTGGACTACCCTTCAACGGCCGGG TCGGGCACCTGCAAGGGCTACCTGGCCAGGCCGGCCAACGCCTCCGGCAAGCTGCCGGGTGTACTGGTGATACATGAGAA CCGCGGACTCAACCCGCACATTGAAGATATTGCTCGCCGCCTGGCGCTCGACAACTTCATCGCCTTTGCGCCCGACGCGC TCTCGCCGCTGGGCGGCTACCCGGGCGACGAAGACAAGGCCTGGGATCTTTTTGGCCGGCTGGACCAACCAAAGGTCATT GAGGATTTTGTCGCAGCTGCGACTTTTCTGCGTGGCCGGGAAGAGTGCACGGGCAAAGTAGGCGTCGTCGGCTTCTGCTA CGGCGGTGGCGTGGCTCATACACTGTCGACCCGCCTGCCCGAACTCAACGCGGTCGTGTCTTTTTATGGCAACCACCCTC CGACAGAAGCCGCAGCCAAAGTCAAGGCCCCGCTGCTGATCCACTTTGCGGGGCTCGACGAACGCATCAACGCGTCCTGG CCGGCCTACGAGGCGGCCCTGAAAGCCGCCGGTGTGCGCTACACGGCCCATCAGTATGCCGGCACCCAGCACGGTTTTAA TAATGACACGACACCGCGCTACGACGCCGCCGCAGCCCGGCTGGCATGGGGGCGCACGATGGAATTTTTCAACAAGCACC TGAGAACGCCCGGGGCCTGA
Upstream 100 bases:
>100_bases CCAGCCATTTCCTGGCCCTTGCGGCCACTGGGGAATTTACAGATGCTTTCAATCTGTCCGGCAGCGCGCCGAGATGCTGA AGGTTTGTCAGGAGCCGCTT
Downstream 100 bases:
>100_bases CGGCTCCTGGTCCTGGTCCTGCAGCTCACGCCGGTGCCGGATGCAGGCAGGTGTGCGCCTGCCCCATCCGTTACCGTCAA CGAGCGTGTGCCCGGCTTGG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRKTAQDFDQELLILFDAYVHGTIDRRGFLERAQKFATAGMTAGALLAALSPNFAAGQQVPKDDRRLKTAMLDYPSTAG SGTCKGYLARPANASGKLPGVLVIHENRGLNPHIEDIARRLALDNFIAFAPDALSPLGGYPGDEDKAWDLFGRLDQPKVI EDFVAAATFLRGREECTGKVGVVGFCYGGGVAHTLSTRLPELNAVVSFYGNHPPTEAAAKVKAPLLIHFAGLDERINASW PAYEAALKAAGVRYTAHQYAGTQHGFNNDTTPRYDAAAARLAWGRTMEFFNKHLRTPGA
Sequences:
>Translated_299_residues MTRKTAQDFDQELLILFDAYVHGTIDRRGFLERAQKFATAGMTAGALLAALSPNFAAGQQVPKDDRRLKTAMLDYPSTAG SGTCKGYLARPANASGKLPGVLVIHENRGLNPHIEDIARRLALDNFIAFAPDALSPLGGYPGDEDKAWDLFGRLDQPKVI EDFVAAATFLRGREECTGKVGVVGFCYGGGVAHTLSTRLPELNAVVSFYGNHPPTEAAAKVKAPLLIHFAGLDERINASW PAYEAALKAAGVRYTAHQYAGTQHGFNNDTTPRYDAAAARLAWGRTMEFFNKHLRTPGA >Mature_298_residues TRKTAQDFDQELLILFDAYVHGTIDRRGFLERAQKFATAGMTAGALLAALSPNFAAGQQVPKDDRRLKTAMLDYPSTAGS GTCKGYLARPANASGKLPGVLVIHENRGLNPHIEDIARRLALDNFIAFAPDALSPLGGYPGDEDKAWDLFGRLDQPKVIE DFVAAATFLRGREECTGKVGVVGFCYGGGVAHTLSTRLPELNAVVSFYGNHPPTEAAAKVKAPLLIHFAGLDERINASWP AYEAALKAAGVRYTAHQYAGTQHGFNNDTTPRYDAAAARLAWGRTMEFFNKHLRTPGA
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=225, Percent_Identity=31.5555555555556, Blast_Score=104, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 32333; Mature: 32202
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKTAQDFDQELLILFDAYVHGTIDRRGFLERAQKFATAGMTAGALLAALSPNFAAGQQ CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC VPKDDRRLKTAMLDYPSTAGSGTCKGYLARPANASGKLPGVLVIHENRGLNPHIEDIARR CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHH LALDNFIAFAPDALSPLGGYPGDEDKAWDLFGRLDQPKVIEDFVAAATFLRGREECTGKV HHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCC GVVGFCYGGGVAHTLSTRLPELNAVVSFYGNHPPTEAAAKVKAPLLIHFAGLDERINASW CEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCCCC PAYEAALKAAGVRYTAHQYAGTQHGFNNDTTPRYDAAAARLAWGRTMEFFNKHLRTPGA CHHHHHHHHCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRKTAQDFDQELLILFDAYVHGTIDRRGFLERAQKFATAGMTAGALLAALSPNFAAGQQ CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC VPKDDRRLKTAMLDYPSTAGSGTCKGYLARPANASGKLPGVLVIHENRGLNPHIEDIARR CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHH LALDNFIAFAPDALSPLGGYPGDEDKAWDLFGRLDQPKVIEDFVAAATFLRGREECTGKV HHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCC GVVGFCYGGGVAHTLSTRLPELNAVVSFYGNHPPTEAAAKVKAPLLIHFAGLDERINASW CEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCCCC PAYEAALKAAGVRYTAHQYAGTQHGFNNDTTPRYDAAAARLAWGRTMEFFNKHLRTPGA CHHHHHHHHCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]