Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788580

Identifier: 91788580

GI number: 91788580

Start: 2865924

End: 2866232

Strand: Direct

Name: 91788580

Synonym: Bpro_2718

Alternate gene names: NA

Gene position: 2865924-2866232 (Clockwise)

Preceding gene: 91788579

Following gene: 91788581

Centisome position: 55.11

GC content: 56.96

Gene sequence:

>309_bases
ATGCATCACGTCGCTGAAAAAACTGCTGAATACCCAGTGGAAGCCCCGGCACGTCATGTCCGCCTGTTTCGCAACGGGGC
GAATCAGGCCGTGCGAATTCCCAAAGAATTTGAATTGCCCGGCAAAGAGGCGGTCATGCACCGCGAAGGCGACAAGCTCA
TCATCGAACCGATTCAACCAAAGCATCCCAAGGGCAGCGCTGCGGCACTGCTGGCCGCGCTGGAAAGCATGAAAAGCTGG
GAGCCCATGCTCGAAGAATTTCCCGACGTGGACGAGGGGCTCTTGCCGCTGGATGACATCAAGCTATGA

Upstream 100 bases:

>100_bases
TGGTGCGCGATGTGCTCAGGAGTTTGGGGCAGCCCAAACCCGTGACATATGCCGAGGCATAGGCTAAACTAACGCATATC
CGCACTCATTGGAGAAGATC

Downstream 100 bases:

>100_bases
GTAGAAGGTTTCTGCTCGACACCAATATCATTTCCAACATGATGCGTGACGCCAACGGCATCGCCGCCCAGCGCTTTGCA
CAAATCGCAAAAGAATTCGA

Product: virulence-associated protein VapB-like protein

Products: NA

Alternate protein names: SpoVT/AbrB-Like; SpoVT/AbrB Family Protein; Virulence-Associated Protein VapB-Like; SpoVT/AbrB Domain Protein; SpoVT/AbrB Domain-Containing Protein; NtrP Protein; Virulence-Associated Protein

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW
EPMLEEFPDVDEGLLPLDDIKL

Sequences:

>Translated_102_residues
MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW
EPMLEEFPDVDEGLLPLDDIKL
>Mature_102_residues
MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQPKHPKGSAAALLAALESMKSW
EPMLEEFPDVDEGLLPLDDIKL

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11441; Mature: 11441

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQP
CCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEECCCCC
KHPKGSAAALLAALESMKSWEPMLEEFPDVDEGLLPLDDIKL
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHHVAEKTAEYPVEAPARHVRLFRNGANQAVRIPKEFELPGKEAVMHREGDKLIIEPIQP
CCCCHHHHHCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEECCCCC
KHPKGSAAALLAALESMKSWEPMLEEFPDVDEGLLPLDDIKL
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA