| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788564
Identifier: 91788564
GI number: 91788564
Start: 2846508
End: 2847089
Strand: Reverse
Name: 91788564
Synonym: Bpro_2702
Alternate gene names: NA
Gene position: 2847089-2846508 (Counterclockwise)
Preceding gene: 91788565
Following gene: 91788563
Centisome position: 54.75
GC content: 57.39
Gene sequence:
>582_bases GTGCCACCTTCGCTGGGCTCGTCCCCTGCGGACGGCGCTCCCGATGCCACCAGCGGCAAAGCTGCCGCTGTCGAGGCTGC AGCACCGCGGATCATCAAGAAGTACCCGAACCGGCGGCTGTACGACACCGAAACCTCAACCTACATCACCCTGACCGAAG TGCGGCAGCTGGTGATGGACAGCGCACCGTTTGTGGTGCGCGATGCCAAGAACAACGAAGACCTGACGCGCAGCATCCTT CTGCAGATCATTCTGGAAGAAGAAACCGGCGGCGCACCGATGTTTACCGAGGCCGTGCTGGCCAACATCATCCGTTTTTA CGGCAATGCAATGCAGAGCTTCATGGGCGCCTACCTCGAGAAGAACGTCCAGAGTTTCATGGATCTGCAAGTGAAGATGG CTGAGCAGTCCAAGGGACTGAGCCCGGAAAAATGGGCGCAATTCCTGAATGCGCAGTCACCCATGATGCAGGGCATGCTG GGCACCTATGTCGAGCAGTCCAAAAGCGTTTTTACGCAGATGCAAGAGCAAATGCAAAAGCAGAGTGAGCAGATGTTGTC GGCTTTTGGCCTGAAGCGCTGA
Upstream 100 bases:
>100_bases AGACTTCCTAGAATGTACCGAACCCTGTCGCTTTGACGCAGGCCGTCGTTCAGAGGAGTAATCAGTGCAAAAAAGAAAAT CCATCAGCCCGAAACCGGGT
Downstream 100 bases:
>100_bases ACACTCAATTTTCTGCCTGATGTGCATGCAGGGCCATCGCGGCCCTGTCCGCTCCCGGCTCTGCCTGCTCTGAGACAATA GAGGCCATGAGCGAAGTACT
Product: polyhydroxyalkanoate synthesis repressor PhaR
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPPSLGSSPADGAPDATSGKAAAVEAAAPRIIKKYPNRRLYDTETSTYITLTEVRQLVMDSAPFVVRDAKNNEDLTRSIL LQIILEEETGGAPMFTEAVLANIIRFYGNAMQSFMGAYLEKNVQSFMDLQVKMAEQSKGLSPEKWAQFLNAQSPMMQGML GTYVEQSKSVFTQMQEQMQKQSEQMLSAFGLKR
Sequences:
>Translated_193_residues MPPSLGSSPADGAPDATSGKAAAVEAAAPRIIKKYPNRRLYDTETSTYITLTEVRQLVMDSAPFVVRDAKNNEDLTRSIL LQIILEEETGGAPMFTEAVLANIIRFYGNAMQSFMGAYLEKNVQSFMDLQVKMAEQSKGLSPEKWAQFLNAQSPMMQGML GTYVEQSKSVFTQMQEQMQKQSEQMLSAFGLKR >Mature_192_residues PPSLGSSPADGAPDATSGKAAAVEAAAPRIIKKYPNRRLYDTETSTYITLTEVRQLVMDSAPFVVRDAKNNEDLTRSILL QIILEEETGGAPMFTEAVLANIIRFYGNAMQSFMGAYLEKNVQSFMDLQVKMAEQSKGLSPEKWAQFLNAQSPMMQGMLG TYVEQSKSVFTQMQEQMQKQSEQMLSAFGLKR
Specific function: Unknown
COG id: COG5394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012909 - InterPro: IPR010134 - InterPro: IPR007897 [H]
Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]
EC number: NA
Molecular weight: Translated: 21421; Mature: 21290
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSLGSSPADGAPDATSGKAAAVEAAAPRIIKKYPNRRLYDTETSTYITLTEVRQLVMD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHHHHHC SAPFVVRDAKNNEDLTRSILLQIILEEETGGAPMFTEAVLANIIRFYGNAMQSFMGAYLE CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KNVQSFMDLQVKMAEQSKGLSPEKWAQFLNAQSPMMQGMLGTYVEQSKSVFTQMQEQMQK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEQMLSAFGLKR HHHHHHHHHCCCC >Mature Secondary Structure PPSLGSSPADGAPDATSGKAAAVEAAAPRIIKKYPNRRLYDTETSTYITLTEVRQLVMD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHHHHHC SAPFVVRDAKNNEDLTRSILLQIILEEETGGAPMFTEAVLANIIRFYGNAMQSFMGAYLE CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KNVQSFMDLQVKMAEQSKGLSPEKWAQFLNAQSPMMQGMLGTYVEQSKSVFTQMQEQMQK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEQMLSAFGLKR HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7763384 [H]