Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yaeL [C]

Identifier: 91788550

GI number: 91788550

Start: 2829367

End: 2830743

Strand: Reverse

Name: yaeL [C]

Synonym: Bpro_2688

Alternate gene names: 91788550

Gene position: 2830743-2829367 (Counterclockwise)

Preceding gene: 91788551

Following gene: 91788549

Centisome position: 54.43

GC content: 62.96

Gene sequence:

>1377_bases
ATGTTGACGCTGCTTGCCTTTGTGGTCGCTCTCGGCATCCTGATTGCCGTGCACGAATACGGTCATTACCGGGTGGCCGT
CGCCTGCGGCATCAAGGTGCTGAAGTTTTCCATAGGCTTTGGCAAGCCCATTTACACCTGGCGGCTCAAAAACAAGCCCA
CGGAATTTGCGATCGGCATGCTGCCGCTGGGTGGCTACGTCAAGATGCTCGATGAGCGCGAGGCCCCGGTGGATCCGGCC
GAACGCCATCTCGCTTTCAACACCCAGCCGCTGAAGTCCCGCGCGGCCGTCGTAGCCGCCGGGCCTGCTGCCAACCTGCT
GCTGGCCGTGCTGATTTACGCCATCGTCAACTGGAGCGGCCTGCAGGAGCCCAAGGCCGTTCTGGCCAGCCCTGTTGCCG
GCTCCCTGGCAGAGCGGGCCGGGTTGCGCGGCTTTGAGACCGTCCAGCAGGCTGCTTTTGATGGCGATGAGTTGCAGGCG
GTCCGTTCTTTTGAAGACCTCCGCTGGCGACTGACGCAGGGTGCGCTGGATGGCCGTGATCTGCAGCTGGTGCTGGGGAA
CGACTCGGGCAGTTCGTCACGGACTGTCACGCTGGAGCTCAGCAAGCTCGATGCCGCCGAGGCCGATGCCCAGCTTTTCC
GCAAAATCGGCATTCTGGGGCCATGGACCCGCCCGGTGATCGGCGAGGTCATGGCTGGCGGTGCGGCGCAAAAAGCCGGT
CTTCGGGCGGGTGACGTGGTCCTGCGCATGGGTAGCACCGCCATTGTGGATGGACAGCAGCTGCGCGAGGCCATACGGGG
CTCTGCACGGGCTTCCAGGGGCGATGGCGCGGCAATCGCACCGCAGGACTGGCAAGTCCAGCGTGCCGGCCAGACGCTGG
TGCTGCAGGTCGCTCCCGAGATCAAGCGGGAGAGGGGGGTAGCAGTGGCGCGAATCGGCGCCTATGTGGGGGCGCCCCCT
GAATTTGTGACGGTGCGCTATGGGCCGCTCGACGGCTTGTGGCAGGGTGTTGTGCGCACCTGGGAAGTGTCCCAGCTGAC
GCTCAAGATGATGTGGAAAATGGTGATCGGCGAAGCCTCGCTCAAAAATCTGAGTGGGCCGTTAACCATTGCGGATTACG
CCGGCAAGTCGGCCAGCCTGGGCTGGAGCGCCTACCTGCTGTTTCTGGCGCTGATCAGTGTGAGCCTGGGCGTCCTGAAT
CTGCTGCCGCTGCCGGTTCTGGATGGTGGGCACCTGATGTATTATCTTTGGGAGGGGATTACGGGTCGAGGCGTGTCTGA
TGCCTGGATGGACCGGCTGCAACGCGGTGGCGTTGCGATCCTGTTGGGCATGATGTGTATTGCCCTTTTTAATGATCTCA
CCCGGCTATTGGGCTAA

Upstream 100 bases:

>100_bases
ATGGCGGTCTCAGATGTGAACGATATCGAGGGATTGCTGGCACTGGACGCGCGGGCGCGCCTTGTTGCCGGTCAAATCAT
TGAACGTCTGGAGCCATGAC

Downstream 100 bases:

>100_bases
CACCAGGACTCAGGCCAATTTCATACATTTCATGCAAAAACAATTAAATAAATTCAAAATTCGTGCGGTCTGCGCCATTG
CCGCTGGTTTGTTTGCTGTC

Product: peptidase RseP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MLTLLAFVVALGILIAVHEYGHYRVAVACGIKVLKFSIGFGKPIYTWRLKNKPTEFAIGMLPLGGYVKMLDEREAPVDPA
ERHLAFNTQPLKSRAAVVAAGPAANLLLAVLIYAIVNWSGLQEPKAVLASPVAGSLAERAGLRGFETVQQAAFDGDELQA
VRSFEDLRWRLTQGALDGRDLQLVLGNDSGSSSRTVTLELSKLDAAEADAQLFRKIGILGPWTRPVIGEVMAGGAAQKAG
LRAGDVVLRMGSTAIVDGQQLREAIRGSARASRGDGAAIAPQDWQVQRAGQTLVLQVAPEIKRERGVAVARIGAYVGAPP
EFVTVRYGPLDGLWQGVVRTWEVSQLTLKMMWKMVIGEASLKNLSGPLTIADYAGKSASLGWSAYLLFLALISVSLGVLN
LLPLPVLDGGHLMYYLWEGITGRGVSDAWMDRLQRGGVAILLGMMCIALFNDLTRLLG

Sequences:

>Translated_458_residues
MLTLLAFVVALGILIAVHEYGHYRVAVACGIKVLKFSIGFGKPIYTWRLKNKPTEFAIGMLPLGGYVKMLDEREAPVDPA
ERHLAFNTQPLKSRAAVVAAGPAANLLLAVLIYAIVNWSGLQEPKAVLASPVAGSLAERAGLRGFETVQQAAFDGDELQA
VRSFEDLRWRLTQGALDGRDLQLVLGNDSGSSSRTVTLELSKLDAAEADAQLFRKIGILGPWTRPVIGEVMAGGAAQKAG
LRAGDVVLRMGSTAIVDGQQLREAIRGSARASRGDGAAIAPQDWQVQRAGQTLVLQVAPEIKRERGVAVARIGAYVGAPP
EFVTVRYGPLDGLWQGVVRTWEVSQLTLKMMWKMVIGEASLKNLSGPLTIADYAGKSASLGWSAYLLFLALISVSLGVLN
LLPLPVLDGGHLMYYLWEGITGRGVSDAWMDRLQRGGVAILLGMMCIALFNDLTRLLG
>Mature_458_residues
MLTLLAFVVALGILIAVHEYGHYRVAVACGIKVLKFSIGFGKPIYTWRLKNKPTEFAIGMLPLGGYVKMLDEREAPVDPA
ERHLAFNTQPLKSRAAVVAAGPAANLLLAVLIYAIVNWSGLQEPKAVLASPVAGSLAERAGLRGFETVQQAAFDGDELQA
VRSFEDLRWRLTQGALDGRDLQLVLGNDSGSSSRTVTLELSKLDAAEADAQLFRKIGILGPWTRPVIGEVMAGGAAQKAG
LRAGDVVLRMGSTAIVDGQQLREAIRGSARASRGDGAAIAPQDWQVQRAGQTLVLQVAPEIKRERGVAVARIGAYVGAPP
EFVTVRYGPLDGLWQGVVRTWEVSQLTLKMMWKMVIGEASLKNLSGPLTIADYAGKSASLGWSAYLLFLALISVSLGVLN
LLPLPVLDGGHLMYYLWEGITGRGVSDAWMDRLQRGGVAILLGMMCIALFNDLTRLLG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=471, Percent_Identity=39.7027600849257, Blast_Score=278, Evalue=5e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 49150; Mature: 49150

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLLAFVVALGILIAVHEYGHYRVAVACGIKVLKFSIGFGKPIYTWRLKNKPTEFAIGM
CHHHHHHHHHHHHHHHHHHCCCEEEEHHHCEEEEEEECCCCCCEEEEEECCCCCEEEEEE
LPLGGYVKMLDEREAPVDPAERHLAFNTQPLKSRAAVVAAGPAANLLLAVLIYAIVNWSG
ECCCHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC
LQEPKAVLASPVAGSLAERAGLRGFETVQQAAFDGDELQAVRSFEDLRWRLTQGALDGRD
CCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
LQLVLGNDSGSSSRTVTLELSKLDAAEADAQLFRKIGILGPWTRPVIGEVMAGGAAQKAG
EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCC
LRAGDVVLRMGSTAIVDGQQLREAIRGSARASRGDGAAIAPQDWQVQRAGQTLVLQVAPE
CCCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHCCCEEEEEECHH
IKRERGVAVARIGAYVGAPPEFVTVRYGPLDGLWQGVVRTWEVSQLTLKMMWKMVIGEAS
HHHHCCCEEEEHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LKNLSGPLTIADYAGKSASLGWSAYLLFLALISVSLGVLNLLPLPVLDGGHLMYYLWEGI
HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCC
TGRGVSDAWMDRLQRGGVAILLGMMCIALFNDLTRLLG
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLTLLAFVVALGILIAVHEYGHYRVAVACGIKVLKFSIGFGKPIYTWRLKNKPTEFAIGM
CHHHHHHHHHHHHHHHHHHCCCEEEEHHHCEEEEEEECCCCCCEEEEEECCCCCEEEEEE
LPLGGYVKMLDEREAPVDPAERHLAFNTQPLKSRAAVVAAGPAANLLLAVLIYAIVNWSG
ECCCHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC
LQEPKAVLASPVAGSLAERAGLRGFETVQQAAFDGDELQAVRSFEDLRWRLTQGALDGRD
CCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
LQLVLGNDSGSSSRTVTLELSKLDAAEADAQLFRKIGILGPWTRPVIGEVMAGGAAQKAG
EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHCC
LRAGDVVLRMGSTAIVDGQQLREAIRGSARASRGDGAAIAPQDWQVQRAGQTLVLQVAPE
CCCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHCCCEEEEEECHH
IKRERGVAVARIGAYVGAPPEFVTVRYGPLDGLWQGVVRTWEVSQLTLKMMWKMVIGEAS
HHHHCCCEEEEHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LKNLSGPLTIADYAGKSASLGWSAYLLFLALISVSLGVLNLLPLPVLDGGHLMYYLWEGI
HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCC
TGRGVSDAWMDRLQRGGVAILLGMMCIALFNDLTRLLG
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]