| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabZ [H]
Identifier: 91788546
GI number: 91788546
Start: 2824989
End: 2825429
Strand: Reverse
Name: fabZ [H]
Synonym: Bpro_2684
Alternate gene names: 91788546
Gene position: 2825429-2824989 (Counterclockwise)
Preceding gene: 91788547
Following gene: 91788545
Centisome position: 54.33
GC content: 58.5
Gene sequence:
>441_bases ATGATGGATATTCACCAAATTCTCAAGCAGCTGCCGCACCGGTACCCGATTCTGCTGGTCGACCGTGTGCTCGAAATCGA AAAGGGAAAACGAATCAAGGCCCTCAAGAACGTCACGATGAACGAGCCGTTTTTCATGGGGCACTTCCCTCACCACCCCG TGATGCCGGGCGTGCTGATGCTGGAAGCCATGGCACAGGCCGCTGCCCTGCTGGCGTTCGAAACCCTGGGCGTGACACCG GACGACAAGACGGTGTACTACTTTGCCGGTATTGATGGCGCGCGTTTCAAGCGGCCGGTCGAACCCGGTGACCAGCTGAT CATGGATGTGACGCTGGAGCGCATGAAGGCCGGCATTTTCAAATTCAAGGGTGTGACGCGCGTGGGTGAGGCCATCGCCT GCGAGGCCGAGTTGATGTGCACCATGCGCACCATTGCCTGA
Upstream 100 bases:
>100_bases CCGCGTGGGAAAAAAATGCTGCCACGCTCAAGCAGCTTCACGTCTTGCGGGAAAGACTCAAACAGGCAGAAAAATCGCTG TCGAACATTCAAGAAAAATC
Downstream 100 bases:
>100_bases AGGTGGCTTGAAAGACATGACCGCGCCAGTTCCCGCGCCGGGCATTCATGCCACCGCCCTTGTCGATCCTCTGGCCCAGC TGGACAGCTCGGTCAGTGTC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MMDIHQILKQLPHRYPILLVDRVLEIEKGKRIKALKNVTMNEPFFMGHFPHHPVMPGVLMLEAMAQAAALLAFETLGVTP DDKTVYYFAGIDGARFKRPVEPGDQLIMDVTLERMKAGIFKFKGVTRVGEAIACEAELMCTMRTIA
Sequences:
>Translated_146_residues MMDIHQILKQLPHRYPILLVDRVLEIEKGKRIKALKNVTMNEPFFMGHFPHHPVMPGVLMLEAMAQAAALLAFETLGVTP DDKTVYYFAGIDGARFKRPVEPGDQLIMDVTLERMKAGIFKFKGVTRVGEAIACEAELMCTMRTIA >Mature_146_residues MMDIHQILKQLPHRYPILLVDRVLEIEKGKRIKALKNVTMNEPFFMGHFPHHPVMPGVLMLEAMAQAAALLAFETLGVTP DDKTVYYFAGIDGARFKRPVEPGDQLIMDVTLERMKAGIFKFKGVTRVGEAIACEAELMCTMRTIA
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=140, Percent_Identity=57.8571428571429, Blast_Score=173, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 16444; Mature: 16444
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIHQILKQLPHRYPILLVDRVLEIEKGKRIKALKNVTMNEPFFMGHFPHHPVMPGVLM CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCCCCCHHHHH LEAMAQAAALLAFETLGVTPDDKTVYYFAGIDGARFKRPVEPGDQLIMDVTLERMKAGIF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHH KFKGVTRVGEAIACEAELMCTMRTIA HHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMDIHQILKQLPHRYPILLVDRVLEIEKGKRIKALKNVTMNEPFFMGHFPHHPVMPGVLM CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCCCCCHHHHH LEAMAQAAALLAFETLGVTPDDKTVYYFAGIDGARFKRPVEPGDQLIMDVTLERMKAGIF HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHH KFKGVTRVGEAIACEAELMCTMRTIA HHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA