| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is folD [H]
Identifier: 91788537
GI number: 91788537
Start: 2814965
End: 2815810
Strand: Direct
Name: folD [H]
Synonym: Bpro_2675
Alternate gene names: 91788537
Gene position: 2814965-2815810 (Clockwise)
Preceding gene: 91788536
Following gene: 91788558
Centisome position: 54.13
GC content: 62.88
Gene sequence:
>846_bases ATGACTGCACAACTCATTGACGGGAATGCCCTCTCCAGACAACTGCGTGCGGAGGTCGCCCGGCGCGCGGCAGCGCTGCG CGCCCGCGGCATCACGCCGGGTCTGGCGGTCGTGCTGGTGGGAGAAAATCCGGCCAGCCAGGTCTATGTGCGCAACAAGG TCAAGGCCTGCCAGGACAACGGCCTGCATTCGGTGCTCGAGCACTACCCGGCCGCGCTCAGCGAGGCCGAGTTGCTGGCC CGGGTCCATGCCCTGAACAATGACCCGGCCATCCACGGCATCCTGGTTCAGCTCCCACTGCCTGCGCATATAGACGCGCA CAAGGTCATTGAAGCCATTGCCCCCGGCAAGGATGTCGACGGATTCCATGTGGCCAGCGCAGGCGCCCTGATGGTCGGAC AGCCGGGCTTCTGGCCCTGCACACCCTATGGCTGCATGAAGATGCTGGAAAGCATTGGCTACGACCTGCGGGGCAAGCAC GCCGTGGTCATTGGCCGCAGCAACATCGTGGGCAAGCCCATGGCCATGATGCTGCTGCAAAAAAATGCCACGGTGACGAT CTGCCACAGCGCCACCAAAGACCTGAAGGCCATGACGCTGCAGGCCGACGTGATCGTAGCCGCAGTCGGCAAACGCAATG TGCTGACCGCCGACATGGTCAAGCCGGGTGCTGTCGTCATTGACGTGGGCATGAACCGCAACGATGAAGGCAAACTCTGC GGCGACGTCGACTTTGAAGGCGTCAAGGAGGTGGCAGGCTACATCACGCCGGTGCCTGGCGGCGTCGGCCCCATGACCAT CACCATGCTGCTGGTCAACACGCTGGAATCTGCTGAGCGCCTTTAA
Upstream 100 bases:
>100_bases GAGAGCCACCGGAGCCGAATTCCCAGCCGCTAACTTTTTATAGCTGCTTGCGCCCGTAGTTCCTGGACTAGCGGGCGTTT TTACTTAGAAAATTGAAATC
Downstream 100 bases:
>100_bases TCGGGACTGGATGCTGCCGACGCGGCGCCTGCCGCGGGTCGGCTCAGGCGCCAGAGGCTCAAGCCCGCGCACAACCACTG GCCCAGGTACATGGCGCTTC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTAQLIDGNALSRQLRAEVARRAAALRARGITPGLAVVLVGENPASQVYVRNKVKACQDNGLHSVLEHYPAALSEAELLA RVHALNNDPAIHGILVQLPLPAHIDAHKVIEAIAPGKDVDGFHVASAGALMVGQPGFWPCTPYGCMKMLESIGYDLRGKH AVVIGRSNIVGKPMAMMLLQKNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEGKLC GDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL
Sequences:
>Translated_281_residues MTAQLIDGNALSRQLRAEVARRAAALRARGITPGLAVVLVGENPASQVYVRNKVKACQDNGLHSVLEHYPAALSEAELLA RVHALNNDPAIHGILVQLPLPAHIDAHKVIEAIAPGKDVDGFHVASAGALMVGQPGFWPCTPYGCMKMLESIGYDLRGKH AVVIGRSNIVGKPMAMMLLQKNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEGKLC GDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL >Mature_280_residues TAQLIDGNALSRQLRAEVARRAAALRARGITPGLAVVLVGENPASQVYVRNKVKACQDNGLHSVLEHYPAALSEAELLAR VHALNNDPAIHGILVQLPLPAHIDAHKVIEAIAPGKDVDGFHVASAGALMVGQPGFWPCTPYGCMKMLESIGYDLRGKHA VVIGRSNIVGKPMAMMLLQKNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEGKLCG DVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=46.7796610169492, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI222136639, Length=291, Percent_Identity=41.9243986254296, Blast_Score=232, Evalue=3e-61, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=44.7457627118644, Blast_Score=227, Evalue=8e-60, Organism=Homo sapiens, GI36796743, Length=200, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786741, Length=278, Percent_Identity=52.158273381295, Blast_Score=269, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=42.8082191780822, Blast_Score=226, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=45.993031358885, Blast_Score=265, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=40.6040268456376, Blast_Score=219, Evalue=3e-58, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=43.1034482758621, Blast_Score=250, Evalue=8e-67, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=43.1034482758621, Blast_Score=250, Evalue=8e-67, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=43.1034482758621, Blast_Score=250, Evalue=9e-67, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=43.1034482758621, Blast_Score=250, Evalue=9e-67, Organism=Drosophila melanogaster, GI17136816, Length=294, Percent_Identity=46.9387755102041, Blast_Score=248, Evalue=3e-66, Organism=Drosophila melanogaster, GI17136818, Length=294, Percent_Identity=46.9387755102041, Blast_Score=248, Evalue=3e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 29700; Mature: 29569
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQLIDGNALSRQLRAEVARRAAALRARGITPGLAVVLVGENPASQVYVRNKVKACQDN CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHEEEHHHHHHHHCC GLHSVLEHYPAALSEAELLARVHALNNDPAIHGILVQLPLPAHIDAHKVIEAIAPGKDVD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCC GFHVASAGALMVGQPGFWPCTPYGCMKMLESIGYDLRGKHAVVIGRSNIVGKPMAMMLLQ CEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHEEC KNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEGKLC CCCEEEEEECCCCCHHHEEEECCEEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCEE GDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL CCCCHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAQLIDGNALSRQLRAEVARRAAALRARGITPGLAVVLVGENPASQVYVRNKVKACQDN CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHEEEHHHHHHHHCC GLHSVLEHYPAALSEAELLARVHALNNDPAIHGILVQLPLPAHIDAHKVIEAIAPGKDVD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCC GFHVASAGALMVGQPGFWPCTPYGCMKMLESIGYDLRGKHAVVIGRSNIVGKPMAMMLLQ CEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHEEC KNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEGKLC CCCEEEEEECCCCCHHHEEEECCEEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCEE GDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL CCCCHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA