| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788519
Identifier: 91788519
GI number: 91788519
Start: 2793869
End: 2794609
Strand: Reverse
Name: 91788519
Synonym: Bpro_2657
Alternate gene names: NA
Gene position: 2794609-2793869 (Counterclockwise)
Preceding gene: 91788520
Following gene: 91788518
Centisome position: 53.74
GC content: 65.99
Gene sequence:
>741_bases ATGAGTATCGCCATGAGCACCCCCCTGAAATTAACGGCGGCCGTTGGAGCGATTGCCGTCTTGTTGCTCAGCGCGTGCGC CAGCGGCCCGAAGCCGCCCGACTGGCAACTCGAAGCAAAAGGTTCCATGGAGCGTTCCGTGGCCGCTTATATGGAAGGCA ATTCCCGTGTGGAACAGGCCGAGCTGGAGCGCGCGCGCAGCCAGCTCGCGCGCACCGGCCGCGCCGACTTGCTGGCCACC GCAGAACTGCTGCACTGCGCCACCCGTGTGGCCAGCCTCGTGTTTGAATCCTGTGCCGGCTTTGAAAAACTGCGCCAGGA TGTGTCGGCGCCGCAGCGCGCCTATGCAGATTACCTCGGCGGTCGGGTACAGCCCCAGGACGTCGCCTTGCTCCCGGCGC CACAACGCGCCGCTGCAGTGGGCGATGCCGGTGCCCTGAAGTCCATGACCGATCCGCTGTCGCAACTGGTCGCCGCAGGT GTGCTGCTGCAAACCGGCAAGGCCAGCCCGGCTGTCATCGCGCAGGCTATCGACACCGCCTCGGCCCAGGGCTGGCGGCG TCCGCTGCTGGCGTGGCTGGGCGTGCAGGCGCAGCGTGCAGAGCAGGGCGGAGACCTCGAAGAAGCCGCCCGGTTGCGCA GGCGTATGGACATCGCGCAGCGCAGCGCTTCCGGGGCAAAGGCGCCCGTAAAAGAAGCTGCACAGGAAGCGGCCAAAGAA ATACCGAAAGAAAACAAGTGA
Upstream 100 bases:
>100_bases TGCGGGCCGATGTGGAGGCCAGCTTGCGCAAGGTGGACAGCCTGGTCAACGAGATCAACCGCAAATGGCCGTTTGCCCGT GACGCGGAGATGAAACTGCC
Downstream 100 bases:
>100_bases GGAACACCCGTTGAGCTACACCCTCAAGCTGTACGCCTTCGAGGACGTCTCCCCCGAGGAACTGCAGGCGGCAGAGCGGC GCTTCAGGCAGGCACTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSIAMSTPLKLTAAVGAIAVLLLSACASGPKPPDWQLEAKGSMERSVAAYMEGNSRVEQAELERARSQLARTGRADLLAT AELLHCATRVASLVFESCAGFEKLRQDVSAPQRAYADYLGGRVQPQDVALLPAPQRAAAVGDAGALKSMTDPLSQLVAAG VLLQTGKASPAVIAQAIDTASAQGWRRPLLAWLGVQAQRAEQGGDLEEAARLRRRMDIAQRSASGAKAPVKEAAQEAAKE IPKENK
Sequences:
>Translated_246_residues MSIAMSTPLKLTAAVGAIAVLLLSACASGPKPPDWQLEAKGSMERSVAAYMEGNSRVEQAELERARSQLARTGRADLLAT AELLHCATRVASLVFESCAGFEKLRQDVSAPQRAYADYLGGRVQPQDVALLPAPQRAAAVGDAGALKSMTDPLSQLVAAG VLLQTGKASPAVIAQAIDTASAQGWRRPLLAWLGVQAQRAEQGGDLEEAARLRRRMDIAQRSASGAKAPVKEAAQEAAKE IPKENK >Mature_245_residues SIAMSTPLKLTAAVGAIAVLLLSACASGPKPPDWQLEAKGSMERSVAAYMEGNSRVEQAELERARSQLARTGRADLLATA ELLHCATRVASLVFESCAGFEKLRQDVSAPQRAYADYLGGRVQPQDVALLPAPQRAAAVGDAGALKSMTDPLSQLVAAGV LLQTGKASPAVIAQAIDTASAQGWRRPLLAWLGVQAQRAEQGGDLEEAARLRRRMDIAQRSASGAKAPVKEAAQEAAKEI PKENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25892; Mature: 25761
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAMSTPLKLTAAVGAIAVLLLSACASGPKPPDWQLEAKGSMERSVAAYMEGNSRVEQA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHH ELERARSQLARTGRADLLATAELLHCATRVASLVFESCAGFEKLRQDVSAPQRAYADYLG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GRVQPQDVALLPAPQRAAAVGDAGALKSMTDPLSQLVAAGVLLQTGKASPAVIAQAIDTA CCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAQGWRRPLLAWLGVQAQRAEQGGDLEEAARLRRRMDIAQRSASGAKAPVKEAAQEAAKE HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IPKENK CCCCCC >Mature Secondary Structure SIAMSTPLKLTAAVGAIAVLLLSACASGPKPPDWQLEAKGSMERSVAAYMEGNSRVEQA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHH ELERARSQLARTGRADLLATAELLHCATRVASLVFESCAGFEKLRQDVSAPQRAYADYLG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GRVQPQDVALLPAPQRAAAVGDAGALKSMTDPLSQLVAAGVLLQTGKASPAVIAQAIDTA CCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAQGWRRPLLAWLGVQAQRAEQGGDLEEAARLRRRMDIAQRSASGAKAPVKEAAQEAAKE HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IPKENK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA