Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788516

Identifier: 91788516

GI number: 91788516

Start: 2792499

End: 2793089

Strand: Direct

Name: 91788516

Synonym: Bpro_2654

Alternate gene names: NA

Gene position: 2792499-2793089 (Clockwise)

Preceding gene: 91788504

Following gene: 91788517

Centisome position: 53.7

GC content: 65.31

Gene sequence:

>591_bases
ATGGATGCACCGATGGACGCTTCGACCCTGCCCGCGCGCGAACGCATCCTCGTGACTGCGCACGAACTTTTTTACCGCGA
CGGCCTGCGCGCCACCGGCATCGACCGCATCATTGCCGAGTCGGGCGTGGCCAAGCTCACCTTTTATCGGCACTTTCCCA
GCAAGGACGAGCTGATTCGAACCTTTCTCGATTACCGCCACGAGCGCTGGATGGCCTGGTTTGTGGATGCACTGGGGCGC
CATGGCGCCGCACCGGGCGGTGGCTTGCAGCCACTCTGGAAGGCTATGGCCGAGTGGTTCAATGAACCGGCATTCCGCGG
TTGCGCCTTCATCAACGCGGTGGCCGAGGTGGGCGGCAGCCTGCCCGGCGTGCTGCAGATTGCGCAGAACCACAAGCAGG
ACATGCGACAGGTCATCACCGCCCTTCTGCCCGAGAACCCCGACCGCGCAGACGCTGCCGCCGCCGCAGCGCTGGCCGTT
GACGGTGCGATTGTGCGGGCGCAAATGGACGGCAGTGCCCCGGCGATTGCCGGATTGCGCCAGTTGCTTGATGCGCTGGA
GTCCGCAGCCACATCCGCCTCTGGCCGCTAA

Upstream 100 bases:

>100_bases
TTGGATAGCTGAATGCACAGCAAGTAGACAGACTTGTCTACTTGCTGGAATTTTGACACAAGTAGACAGATCTGTCTACA
ATGCCCTCATCGCTATTTGA

Downstream 100 bases:

>100_bases
TCCATTGCCGGATTCATTGTCTGATCAATTGCCTGATCCATTGCCGGGTTAGCCGGTTGTCGTTACGATGCAGCTTGAAA
GCAAGTCATCTCTTGACAAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR
HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV
DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR

Sequences:

>Translated_196_residues
MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR
HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV
DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR
>Mature_196_residues
MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR
HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV
DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21179; Mature: 21179

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIR
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
TFLDYRHERWMAWFVDALGRHGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
LPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAVDGAIVRAQMDGSAPAIAGLR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH
QLLDALESAATSASGR
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIR
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
TFLDYRHERWMAWFVDALGRHGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
LPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAVDGAIVRAQMDGSAPAIAGLR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH
QLLDALESAATSASGR
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA