| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788516
Identifier: 91788516
GI number: 91788516
Start: 2792499
End: 2793089
Strand: Direct
Name: 91788516
Synonym: Bpro_2654
Alternate gene names: NA
Gene position: 2792499-2793089 (Clockwise)
Preceding gene: 91788504
Following gene: 91788517
Centisome position: 53.7
GC content: 65.31
Gene sequence:
>591_bases ATGGATGCACCGATGGACGCTTCGACCCTGCCCGCGCGCGAACGCATCCTCGTGACTGCGCACGAACTTTTTTACCGCGA CGGCCTGCGCGCCACCGGCATCGACCGCATCATTGCCGAGTCGGGCGTGGCCAAGCTCACCTTTTATCGGCACTTTCCCA GCAAGGACGAGCTGATTCGAACCTTTCTCGATTACCGCCACGAGCGCTGGATGGCCTGGTTTGTGGATGCACTGGGGCGC CATGGCGCCGCACCGGGCGGTGGCTTGCAGCCACTCTGGAAGGCTATGGCCGAGTGGTTCAATGAACCGGCATTCCGCGG TTGCGCCTTCATCAACGCGGTGGCCGAGGTGGGCGGCAGCCTGCCCGGCGTGCTGCAGATTGCGCAGAACCACAAGCAGG ACATGCGACAGGTCATCACCGCCCTTCTGCCCGAGAACCCCGACCGCGCAGACGCTGCCGCCGCCGCAGCGCTGGCCGTT GACGGTGCGATTGTGCGGGCGCAAATGGACGGCAGTGCCCCGGCGATTGCCGGATTGCGCCAGTTGCTTGATGCGCTGGA GTCCGCAGCCACATCCGCCTCTGGCCGCTAA
Upstream 100 bases:
>100_bases TTGGATAGCTGAATGCACAGCAAGTAGACAGACTTGTCTACTTGCTGGAATTTTGACACAAGTAGACAGATCTGTCTACA ATGCCCTCATCGCTATTTGA
Downstream 100 bases:
>100_bases TCCATTGCCGGATTCATTGTCTGATCAATTGCCTGATCCATTGCCGGGTTAGCCGGTTGTCGTTACGATGCAGCTTGAAA GCAAGTCATCTCTTGACAAA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR
Sequences:
>Translated_196_residues MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR >Mature_196_residues MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIRTFLDYRHERWMAWFVDALGR HGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGSLPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAV DGAIVRAQMDGSAPAIAGLRQLLDALESAATSASGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21179; Mature: 21179
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIR CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH TFLDYRHERWMAWFVDALGRHGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC LPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAVDGAIVRAQMDGSAPAIAGLR CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH QLLDALESAATSASGR HHHHHHHHHHHCCCCC >Mature Secondary Structure MDAPMDASTLPARERILVTAHELFYRDGLRATGIDRIIAESGVAKLTFYRHFPSKDELIR CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH TFLDYRHERWMAWFVDALGRHGAAPGGGLQPLWKAMAEWFNEPAFRGCAFINAVAEVGGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC LPGVLQIAQNHKQDMRQVITALLPENPDRADAAAAAALAVDGAIVRAQMDGSAPAIAGLR CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH QLLDALESAATSASGR HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA