| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788504
Identifier: 91788504
GI number: 91788504
Start: 2782211
End: 2782855
Strand: Direct
Name: 91788504
Synonym: Bpro_2642
Alternate gene names: NA
Gene position: 2782211-2782855 (Clockwise)
Preceding gene: 91788502
Following gene: 91788516
Centisome position: 53.5
GC content: 60.62
Gene sequence:
>645_bases ATGGGCAAAAACAGTCGTCAGTGGTCAGAGGCGTCGGAAGTCATTTCGATGTTTCCCAGCCTGGTCTGGAAGACCCAGAT TGAGCCACGCCTGCGTGATGCCATGCGCGTACAAATCCTGGCAGCGCTGGCCGACATGAGGCAGGGTGCGCCCCCGCTTG AGGCGGGCCAGGGCTGGCAATCGGTACAGGATTTCCACCAACACGAGGCCATGCGCGAACTCGTCTCGTGCATCGACCAC TGCGCGGCGGGCGTTCTCCGATTCCTGTGTATTGGCGCTGCGGACTACGAAATCACCGGCTGCTGGGCCACCGTTTTGGC ACCCGGCGCATCCCACAAGCTGCACAGCCACCCCAACAATTTTCTCAGCGGCGTTTACTACGTCCGCACCGGCGAAGGTG CCAACACCATTAACTTCCACGACCCCAGAAAACAGGCCAACGTCATCAGGCCGCCAGTCACCGAACTCACGGCGCAGAAC ACGGACCAGGTCGTGGTCCAGGTGCGCGAGGGCACGCTTTTATTGTTCCCCTCCTACCTGGAGCACTCCGTCGATGCCAA CGGGAGCGCTGACGAGAGAGTCAGCATCAGCTTCAATCTGATGTTCTCTTCGTTCGCGCAGCGGCTCAGCAAGCCGCTGT GGTGA
Upstream 100 bases:
>100_bases GGGAAATAAGAGCGAAGAGCGGTAGCGCTCTGCGCTGCCTCTGCGCACGCGCGCCACGGATTTCGTGACGCCGGGCCCGG TTCTTCTGGAGCGTTGACCC
Downstream 100 bases:
>100_bases GGGCGTTCGAAGCGCAAAGGAATCCAGGAGGCTGGCCGTACTACCGTACTACCGTACTACCGTCAGCCATCAGGCGCCCT ACCCCTTTCAGGCAGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGKNSRQWSEASEVISMFPSLVWKTQIEPRLRDAMRVQILAALADMRQGAPPLEAGQGWQSVQDFHQHEAMRELVSCIDH CAAGVLRFLCIGAADYEITGCWATVLAPGASHKLHSHPNNFLSGVYYVRTGEGANTINFHDPRKQANVIRPPVTELTAQN TDQVVVQVREGTLLLFPSYLEHSVDANGSADERVSISFNLMFSSFAQRLSKPLW
Sequences:
>Translated_214_residues MGKNSRQWSEASEVISMFPSLVWKTQIEPRLRDAMRVQILAALADMRQGAPPLEAGQGWQSVQDFHQHEAMRELVSCIDH CAAGVLRFLCIGAADYEITGCWATVLAPGASHKLHSHPNNFLSGVYYVRTGEGANTINFHDPRKQANVIRPPVTELTAQN TDQVVVQVREGTLLLFPSYLEHSVDANGSADERVSISFNLMFSSFAQRLSKPLW >Mature_213_residues GKNSRQWSEASEVISMFPSLVWKTQIEPRLRDAMRVQILAALADMRQGAPPLEAGQGWQSVQDFHQHEAMRELVSCIDHC AAGVLRFLCIGAADYEITGCWATVLAPGASHKLHSHPNNFLSGVYYVRTGEGANTINFHDPRKQANVIRPPVTELTAQNT DQVVVQVREGTLLLFPSYLEHSVDANGSADERVSISFNLMFSSFAQRLSKPLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23806; Mature: 23675
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNSRQWSEASEVISMFPSLVWKTQIEPRLRDAMRVQILAALADMRQGAPPLEAGQGWQ CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SVQDFHQHEAMRELVSCIDHCAAGVLRFLCIGAADYEITGCWATVLAPGASHKLHSHPNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCH FLSGVYYVRTGEGANTINFHDPRKQANVIRPPVTELTAQNTDQVVVQVREGTLLLFPSYL HHCCEEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCEEEEEECCEEEEEHHHH EHSVDANGSADERVSISFNLMFSSFAQRLSKPLW HHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure GKNSRQWSEASEVISMFPSLVWKTQIEPRLRDAMRVQILAALADMRQGAPPLEAGQGWQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SVQDFHQHEAMRELVSCIDHCAAGVLRFLCIGAADYEITGCWATVLAPGASHKLHSHPNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCH FLSGVYYVRTGEGANTINFHDPRKQANVIRPPVTELTAQNTDQVVVQVREGTLLLFPSYL HHCCEEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCEEEEEECCEEEEEHHHH EHSVDANGSADERVSISFNLMFSSFAQRLSKPLW HHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA