Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yegD [H]

Identifier: 91788513

GI number: 91788513

Start: 2789959

End: 2791221

Strand: Reverse

Name: yegD [H]

Synonym: Bpro_2651

Alternate gene names: 91788513

Gene position: 2791221-2789959 (Counterclockwise)

Preceding gene: 91788514

Following gene: 91788512

Centisome position: 53.67

GC content: 63.26

Gene sequence:

>1263_bases
TTGGCTGACGCATGCGGGATTGACTTCGGAACGTCCAACTCCACCACGGGCTGGAGGCGGCCCGGGCAAAGCGCTCCATC
CTCTCTGTTGTTGCCGCTCGAAGACGGCAAGCTGACGCTGCCCTCGGTGGTGTTTTTCCACGCCGAAGATGCCCACGTCA
GCTATGGGCGTGCCGCACTGGCGGACTATCTGGCGGGGCATGAGGGCCGACTGATGCGTTCCCTCAAGAGCCTGCTCGGC
ACCTCGATGATGGACGATCACACCGAGGTGATGGGCCGGGCCTTGCCGTTCAGGGATTTGCTGGCGCAGTTTGTGGGCGA
ACTCAAGCGCCGTGCCGAGCACGCGGCCGGGCGTGAATTCACCCGTGCCGTGCTTGGCCGGCCGGTATTTTTTGTGGATG
ACGATCACAAGGCTGACCTGCGGGCCGAACGCACGCTGGAAGAGATTGCCCGCAAGGCCGGCCTGCGCGAGATCGCTTTC
CAGTACGAACCGATTGCGGCAGCCTTTGACTATGAGTCGCAAATCACCCGTGAAGAACTGGTGCTGGTGGTTGACATTGG
CGGCGGTACCTCCGACTTTGCGTTGATCCGTCTGTCACCCGAGCGCGCCGGCCGCCCGGAGCGGCGCGACGACATCCTGG
CCAGCGGTGGCGTGCATATTGGGGGCACGGATTTCGACAAGTACCTGAGCCTTTCCAGCATGATGCCGATCCTGGGGCTT
GGCAGCCTGCTGAAAAGCGGCCGCGAAGTACCGTCAGCACAGTACTTCAACCTCGCGACCTGGCACACCATCAACCAGGC
CTACAGCAAAAAGTCCTGGTCGCAGATCAGCGACATGCACCGCGAAGCGCGTGACAAGGTCAAGCTGGAGCGGCTGCAGA
GCGTGGTCAGGCAGCGCGCCGGCCACTGGCTCGCGCTGCAGGTTGAAGAGGCCAAGATCACCCTGTCGAACGCAGCCGAG
GCGCAGATTGACATCGGCCGCATCGCTGCCGGGGAGACGGTGACGCTGCAACGGGCGGATCTGGATGGTGCCATCGAGGG
GCTAGTGGCTTCCGTAGCGCAAACCGTGGCACGGCTGCTGCGTGACGCCGGTGTCGCGGCCTCAGGCATTGACACGGTGT
TTTTCACGGGTGGCTCCAGCGGCGTACCTTTGCTGCGCGAGAGAATTCTTGCGCTGATGCCCGACGCCCATTGGGTGGAA
GGTGACTTGTTCGGCAGCATTGGAGCCGGGCTTGCGCTGGATGCCAGCCGCAAGTTTGCCTAG

Upstream 100 bases:

>100_bases
TGGCGCAGGTCCGTGTGCTGCCGTCCTTCAAGCTCAGCCGCGCCAGCGCGGTGACCTGGGTCGAGAACGACTTTCGCAGG
CCGGCTGAGCGGTGAGTACC

Downstream 100 bases:

>100_bases
CAGGGCACCTAAAGCACTGATAGGTCAAGAAGGGCAAGAGCACCTGATCGAGCCCGGAGAGTCCGGAGTTGCGCAGCATT
CCTCGCCCTCAAGACTGAAC

Product: putative heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MADACGIDFGTSNSTTGWRRPGQSAPSSLLLPLEDGKLTLPSVVFFHAEDAHVSYGRAALADYLAGHEGRLMRSLKSLLG
TSMMDDHTEVMGRALPFRDLLAQFVGELKRRAEHAAGREFTRAVLGRPVFFVDDDHKADLRAERTLEEIARKAGLREIAF
QYEPIAAAFDYESQITREELVLVVDIGGGTSDFALIRLSPERAGRPERRDDILASGGVHIGGTDFDKYLSLSSMMPILGL
GSLLKSGREVPSAQYFNLATWHTINQAYSKKSWSQISDMHREARDKVKLERLQSVVRQRAGHWLALQVEEAKITLSNAAE
AQIDIGRIAAGETVTLQRADLDGAIEGLVASVAQTVARLLRDAGVAASGIDTVFFTGGSSGVPLLRERILALMPDAHWVE
GDLFGSIGAGLALDASRKFA

Sequences:

>Translated_420_residues
MADACGIDFGTSNSTTGWRRPGQSAPSSLLLPLEDGKLTLPSVVFFHAEDAHVSYGRAALADYLAGHEGRLMRSLKSLLG
TSMMDDHTEVMGRALPFRDLLAQFVGELKRRAEHAAGREFTRAVLGRPVFFVDDDHKADLRAERTLEEIARKAGLREIAF
QYEPIAAAFDYESQITREELVLVVDIGGGTSDFALIRLSPERAGRPERRDDILASGGVHIGGTDFDKYLSLSSMMPILGL
GSLLKSGREVPSAQYFNLATWHTINQAYSKKSWSQISDMHREARDKVKLERLQSVVRQRAGHWLALQVEEAKITLSNAAE
AQIDIGRIAAGETVTLQRADLDGAIEGLVASVAQTVARLLRDAGVAASGIDTVFFTGGSSGVPLLRERILALMPDAHWVE
GDLFGSIGAGLALDASRKFA
>Mature_419_residues
ADACGIDFGTSNSTTGWRRPGQSAPSSLLLPLEDGKLTLPSVVFFHAEDAHVSYGRAALADYLAGHEGRLMRSLKSLLGT
SMMDDHTEVMGRALPFRDLLAQFVGELKRRAEHAAGREFTRAVLGRPVFFVDDDHKADLRAERTLEEIARKAGLREIAFQ
YEPIAAAFDYESQITREELVLVVDIGGGTSDFALIRLSPERAGRPERRDDILASGGVHIGGTDFDKYLSLSSMMPILGLG
SLLKSGREVPSAQYFNLATWHTINQAYSKKSWSQISDMHREARDKVKLERLQSVVRQRAGHWLALQVEEAKITLSNAAEA
QIDIGRIAAGETVTLQRADLDGAIEGLVASVAQTVARLLRDAGVAASGIDTVFFTGGSSGVPLLRERILALMPDAHWVEG
DLFGSIGAGLALDASRKFA

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Homo sapiens, GI48928056, Length=433, Percent_Identity=24.9422632794457, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI87082035, Length=457, Percent_Identity=30.4157549234136, Blast_Score=191, Evalue=7e-50,
Organism=Escherichia coli, GI1786196, Length=418, Percent_Identity=24.4019138755981, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788875, Length=433, Percent_Identity=27.0207852193995, Blast_Score=85, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17507981, Length=413, Percent_Identity=24.9394673123487, Blast_Score=72, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322426, Length=410, Percent_Identity=23.4146341463415, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 45642; Mature: 45511

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADACGIDFGTSNSTTGWRRPGQSAPSSLLLPLEDGKLTLPSVVFFHAEDAHVSYGRAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCEEEEEECCCCCCHHHHHHH
ADYLAGHEGRLMRSLKSLLGTSMMDDHTEVMGRALPFRDLLAQFVGELKRRAEHAAGREF
HHHHCCCCHHHHHHHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH
TRAVLGRPVFFVDDDHKADLRAERTLEEIARKAGLREIAFQYEPIAAAFDYESQITREEL
HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEECCHHHCCHHHE
VLVVDIGGGTSDFALIRLSPERAGRPERRDDILASGGVHIGGTDFDKYLSLSSMMPILGL
EEEEECCCCCCCEEEEEECHHHCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
GSLLKSGREVPSAQYFNLATWHTINQAYSKKSWSQISDMHREARDKVKLERLQSVVRQRA
HHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHWLALQVEEAKITLSNAAEAQIDIGRIAAGETVTLQRADLDGAIEGLVASVAQTVARLL
CCEEEEEEECEEEEECCCCCCEEEHHEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
RDAGVAASGIDTVFFTGGSSGVPLLRERILALMPDAHWVEGDLFGSIGAGLALDASRKFA
HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
ADACGIDFGTSNSTTGWRRPGQSAPSSLLLPLEDGKLTLPSVVFFHAEDAHVSYGRAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCEEEEEECCCCCCHHHHHHH
ADYLAGHEGRLMRSLKSLLGTSMMDDHTEVMGRALPFRDLLAQFVGELKRRAEHAAGREF
HHHHCCCCHHHHHHHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH
TRAVLGRPVFFVDDDHKADLRAERTLEEIARKAGLREIAFQYEPIAAAFDYESQITREEL
HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHEEECCHHHCCHHHE
VLVVDIGGGTSDFALIRLSPERAGRPERRDDILASGGVHIGGTDFDKYLSLSSMMPILGL
EEEEECCCCCCCEEEEEECHHHCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
GSLLKSGREVPSAQYFNLATWHTINQAYSKKSWSQISDMHREARDKVKLERLQSVVRQRA
HHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHWLALQVEEAKITLSNAAEAQIDIGRIAAGETVTLQRADLDGAIEGLVASVAQTVARLL
CCEEEEEEECEEEEECCCCCCEEEHHEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
RDAGVAASGIDTVFFTGGSSGVPLLRERILALMPDAHWVEGDLFGSIGAGLALDASRKFA
HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]