Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788508

Identifier: 91788508

GI number: 91788508

Start: 2785317

End: 2786117

Strand: Reverse

Name: 91788508

Synonym: Bpro_2646

Alternate gene names: NA

Gene position: 2786117-2785317 (Counterclockwise)

Preceding gene: 91788509

Following gene: 91788507

Centisome position: 53.58

GC content: 64.04

Gene sequence:

>801_bases
ATGCAAATACGTGACTGGTTATGTGTCGGGGTTGTCGGGCTGTTCATTGGGGGCTGCGCGGGAATGCTCGGTGGTGTGAC
CCCGGAGACAAGATCTGCAGTAGCGCCGACGGGCAAGCTCCGGGTCGCATTCCTCTCGGCGCCGATCTATGCGACCAAGG
ATTCCGCGACAGGCGAGCTCAAAGGTGTTGCGGTCGATCTCGGGAAGGAACTCGCGCGCCGAGTGGGCGTGCCGTTCCAG
CCGGTCGTTTATCCCAACCCGCCCGCGCTGCTCGGCGGCGCGAAGTCCGGCGAATGGGACGTTGCGCTGACGGGAATCAA
TGCCGAGCGCGCGGCGGTGATGGATTTTTCGGCGCCTTACATGGAAGTCGAACAGGGTTACCTTGTTCGCGCCGGTGTCA
CTATCGCCAGGGCGTCGGACGTGGACAAGGCCGGGATCCGGATCGGGGTACTCGAAAAATCTGGCGCCGACCTCCATCTT
TCAAACTCTCTGAAGGATGCGGCGCTGGTCCGCGTCAAGAGCCTCCCCGAGAACTATGCCCTGCTGGATACCGGAAAGGC
CGACGTGATTGCCGCTACCAAAACGGCTCTCTTCGAAGGGGCCGCGAGCCGGCCGGGCTCACGGGTTCTCGACGGCCGGA
TTCTGGTCGAGCCGATCAGCATGGGCGTGCCCAAGGGGCGCAATGCCGCCGCTGCTGTGTACGTCGGCCAGTTCGTCGAG
GAGGCGAAAGCGGCGGGGCTGGTCAAGTCCGCGATCGAGCGGGCCGGCCTGCGCGGCGTAGTCGTCGCTCCACTTAAATG
A

Upstream 100 bases:

>100_bases
CGGTGGGGCACACTGGGGAGCTCCGTCTTGGTCTGTAGCCTCGTTGGCCGCCGCTCACCTCAATTCGTTGAGAGCAACGG
TAACTTCAGAGGAGGACGCC

Downstream 100 bases:

>100_bases
GGCGCGTTCGGGCAGCACCAACGAGGAGGAAGCATTGAGAAGAAATACGCTCATCCCGCTTGAGGCCGCGTCAGGTCGTC
CAGCGTCACCCAGCGTCACC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ
PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL
SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE
EAKAAGLVKSAIERAGLRGVVVAPLK

Sequences:

>Translated_266_residues
MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ
PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL
SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE
EAKAAGLVKSAIERAGLRGVVVAPLK
>Mature_266_residues
MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGELKGVAVDLGKELARRVGVPFQ
PVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPYMEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHL
SNSLKDAALVRVKSLPENYALLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE
EAKAAGLVKSAIERAGLRGVVVAPLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27506; Mature: 27506

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCE
KGVAVDLGKELARRVGVPFQPVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPY
EEEEEHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCCEEEEECCCCC
MEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHLSNSLKDAALVRVKSLPENYA
EECCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEE
LLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE
EEECCCCCEEEHHHHHHHCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCHHHHHHHHHH
EAKAAGLVKSAIERAGLRGVVVAPLK
HHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MQIRDWLCVGVVGLFIGGCAGMLGGVTPETRSAVAPTGKLRVAFLSAPIYATKDSATGEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCE
KGVAVDLGKELARRVGVPFQPVVYPNPPALLGGAKSGEWDVALTGINAERAAVMDFSAPY
EEEEEHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCCEEEEECCCCC
MEVEQGYLVRAGVTIARASDVDKAGIRIGVLEKSGADLHLSNSLKDAALVRVKSLPENYA
EECCCCEEEECCEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCEE
LLDTGKADVIAATKTALFEGAASRPGSRVLDGRILVEPISMGVPKGRNAAAAVYVGQFVE
EEECCCCCEEEHHHHHHHCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCHHHHHHHHHH
EAKAAGLVKSAIERAGLRGVVVAPLK
HHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA