| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yfgA [C]
Identifier: 91788471
GI number: 91788471
Start: 2739842
End: 2740894
Strand: Reverse
Name: yfgA [C]
Synonym: Bpro_2609
Alternate gene names: 91788471
Gene position: 2740894-2739842 (Counterclockwise)
Preceding gene: 91788472
Following gene: 91788470
Centisome position: 52.71
GC content: 64.39
Gene sequence:
>1053_bases ATGAGTAACTTCGACCCAGCGCTGGCAGCCAGCTTCGATTCGGAGGCGGGTTCCAGCTTCAGCCACAGCCAGGCCATGCC TGCGCCCCAGTGCACGGCCGGTGACCTGCTTCGGGATGCAAGAGAGGCTGCGGGCCTTCATATTGCGGCGCTGGCTGCCT CGCTGAAAGTTCCCGTCAAGAAGCTTGAAGCGTTGGAGCAGGATCGTTTTGATTTGCTGCCGGACGCGGTATTTGTGCGT GCGCTTGCCTCCAGCGTGTGCCGAACCTTGAAAATAGATCCCACGCAGGTGCTTGAGCGCATGCCTCAATCGCCGGCCCC CAGGCTGGCCCAGCGAAGCGCCAGCATCAACGCGCCGTTTAGTTCGCCTGCTGATGGCCCGCGCGCTTCCCCCTGGAAGC ATGCCTCGCGGCCCGCTGTATTGGCTGTGCTTGCCTTGCTATTGGGTGCCCTGGTTTTGATTTTCCTGCCTGGAGTTGCT GAAGAGCCGGTCACAGTCAAGCGGGAGGCTGAGGATGGGCTGGCCGTTGCCGCCACTGAGAAGCCACAGTCTTTGCCTGC GACGATGGTCATGGCGGGTGCAAGCCTTGCCAGTGGTGCCGCACCGGAAGTGTCGGCTGCAATCAATGTTGCCAGTGCTT CCGCTGCAGAAGGCCTGGCTCCCGCTGCCCCGCCGGGAGACGTGGCAGGGGCCCCTGTAACGCCGCAGGTTGCCATGCAG TCAACTCTGCCTGTTGCTCCCGTCGCTACTGCTGTTGCCACGTTGACGTCTCCTGGTGCGGCTTTGGCCGCCAGTGCACC CGTGACCGCGGTACCCGGCGGCATTGTGACGTTTCGCGCAAAGCAGGAGTCCTGGGTTGAAGTGACTGATGCCAAGGGGG CGGTTGTCCTGCGCCGTACGCTGGCTCCGGGTGAGGTCGCCGGCGCGTCCGGCGCCTTGCCGTTGGCGGCTGTGGTTGGC CGGGCCGACGCCACCCAGGTGCAGGTGCGCGGCCGGGCATTCGACCTGACCGCCGTTGCCCGGGATAACGTGGCCCGTTT CGAGGTGAAATAG
Upstream 100 bases:
>100_bases AAACTGAATAATCGCGAGGCAGTGCTGCAGTTGGCCGATCAGCTGAAAAAGCGCTTTGCCCAGTCTCCCCAAGCTGCCGC CTACGAAAAAGGTGCTTTCA
Downstream 100 bases:
>100_bases TGGAGCCTTGCCTTCCCATCGAGTCGGCTTTTCCGAAAGCACGGCGTTCTACCCAGGCGCTGGTTGCCTGGGGCTCCCGC GTGGTTACCGTGGGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSNFDPALAASFDSEAGSSFSHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVKKLEALEQDRFDLLPDAVFVR ALASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPFSSPADGPRASPWKHASRPAVLAVLALLLGALVLIFLPGVA EEPVTVKREAEDGLAVAATEKPQSLPATMVMAGASLASGAAPEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQ STLPVAPVATAVATLTSPGAALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRTLAPGEVAGASGALPLAAVVG RADATQVQVRGRAFDLTAVARDNVARFEVK
Sequences:
>Translated_350_residues MSNFDPALAASFDSEAGSSFSHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVKKLEALEQDRFDLLPDAVFVR ALASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPFSSPADGPRASPWKHASRPAVLAVLALLLGALVLIFLPGVA EEPVTVKREAEDGLAVAATEKPQSLPATMVMAGASLASGAAPEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQ STLPVAPVATAVATLTSPGAALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRTLAPGEVAGASGALPLAAVVG RADATQVQVRGRAFDLTAVARDNVARFEVK >Mature_349_residues SNFDPALAASFDSEAGSSFSHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVKKLEALEQDRFDLLPDAVFVRA LASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPFSSPADGPRASPWKHASRPAVLAVLALLLGALVLIFLPGVAE EPVTVKREAEDGLAVAATEKPQSLPATMVMAGASLASGAAPEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQS TLPVAPVATAVATLTSPGAALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRTLAPGEVAGASGALPLAAVVGR ADATQVQVRGRAFDLTAVARDNVARFEVK
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35336; Mature: 35204
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFDPALAASFDSEAGSSFSHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVK CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHH KLEALEQDRFDLLPDAVFVRALASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCC SSPADGPRASPWKHASRPAVLAVLALLLGALVLIFLPGVAEEPVTVKREAEDGLAVAATE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC KPQSLPATMVMAGASLASGAAPEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQ CCCCCCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH STLPVAPVATAVATLTSPGAALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRT HCCCHHHHHHHHHHHCCCCCHHCCCCCCEECCCCEEEEEECCCCCEEEECCCCEEEEEEE LAPGEVAGASGALPLAAVVGRADATQVQVRGRAFDLTAVARDNVARFEVK CCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEEHHHCCCCEEEECC >Mature Secondary Structure SNFDPALAASFDSEAGSSFSHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVK CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHH KLEALEQDRFDLLPDAVFVRALASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCC SSPADGPRASPWKHASRPAVLAVLALLLGALVLIFLPGVAEEPVTVKREAEDGLAVAATE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC KPQSLPATMVMAGASLASGAAPEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQ CCCCCCHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH STLPVAPVATAVATLTSPGAALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRT HCCCHHHHHHHHHHHCCCCCHHCCCCCCEECCCCEEEEEECCCCCEEEECCCCEEEEEEE LAPGEVAGASGALPLAAVVGRADATQVQVRGRAFDLTAVARDNVARFEVK CCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEEHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA