Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788420

Identifier: 91788420

GI number: 91788420

Start: 2679344

End: 2680669

Strand: Direct

Name: 91788420

Synonym: Bpro_2558

Alternate gene names: NA

Gene position: 2679344-2680669 (Clockwise)

Preceding gene: 91788419

Following gene: 91788442

Centisome position: 51.52

GC content: 60.86

Gene sequence:

>1326_bases
ATGTTCACACTCCGCCCGATCGTGATTGCCTTGGGTGCCGGCCTGTTGCAGGCCTGCGTGGCGCCCCCTACGCAGAAGGA
ACTCGCCATGCAGCCCGTGTTGCGGGTGCGCCATTCGGCCGACCAGACGGCTGCGACCTATTACCAGCTCGGCAAATACC
ACCAGGAGCGCGGCAATGTCGATCTTGCGCGCGCCGCCTATGCTTATTCGGTAGAACTGGATGGCCGGCAACTGGAAGCG
CGCAATGCGCTCGCCGCCATTCACGCCCAGCAGGGCAGGCTTGAAGACGCCAAGGTGCTACTGCTTCAGCTTGTCGCCGA
GTACCCGGCGGTTGCGCATCCGTACAACAACCTTGGCTTTGTTCACTATCTGCAGGGCAATTACGATGCCGCCGTGGCTA
CGCTACAGCGTGCGCTGGTGCTGGATTCGGAAAACCAGCGGACCCGCAACAATCTCCAGGCGGCAAAGGTGGAACTCGCA
AAACTTGGTGAGCGTCCTGCCGTTGCGCGGGCACCTGCGCCAGCGACGATGGACACACAAGGCGTCCTGCCAGGACAAGC
CACGGCAACCATCACTGAAAATCGCAAGGATGAGATGACGGCAACGGCAACGGCAGTCAGTACACCCGCCCCCGTACCCG
CTCCCATACCCGTATCTGTGCCCACAGTCGCGGTGCAGCGCCCTGCCGAACTGGCTGTGTCGCCCGCGCCTGCACCACGA
ACGCAGGAACTTGCGGTTGCGATTTCGCCCTCGGTGCCGCAAGCCCGCATGGAGGTGGTGCAGGTCGTGCCTAATGTGTT
TGAACTCAGGCCCAAACCTGCTGTTGCCGCTGTTGCTGCTGTTGCTGCTATTGCCCCCATCATTGCTGACAGGCAACCCG
AGAAAGCAGTTGTGGGAGCGGCAACCCTTGTTCCCGTTCCTGCGCTTGCTGCTGCACGTGCTACAACTTCCCCCCCTTCT
GTCGCCGCCACCAAAATGTCCAGAGTGGAAGTTTCCAACGGCAACGGCATCACCGGCATGGCCAAACGAATCAAGGGTGT
GCTTGGCAGGTACGGCATTGCCGTGAGCCGGCTGACCAATGACCGCCCTTTCAAGCAGCAGGACACGAAAATACAGTACC
GGGCTGGCTACGAACAGGCCGCAGAAAGCCTGAAACTTGCCCTGCGGGGCCATGCGGTGGTGGTGCCAGTCAATAAGCTG
TCGGGCAATACCGATGTGCGACTGGTACTGGGAAAAGACGCCGTCGCGCACATGGCCCTGATTGAGGAATGGGCCAGCCA
GTCGCGTTTGGCGTCAAATGGGGAAGGCGAAATCAGCAACCATTGA

Upstream 100 bases:

>100_bases
GCTGGTCGTGCTGATGGGGCCGGCATTCATCCAGATTTACCGCGTACTGCTGCCCACCATGGCCGGCGGCAATTGAGAAG
ATTTTAGAAGGAGCTACATC

Downstream 100 bases:

>100_bases
GTACCCGCGGAAGACTAATCGCCCGCAGGCGTTTACTGTGCAGGCGCGGCAGGCTGTCCGCCGGGATCCTTGAGGCCGAG
CAATGCCGCGAGGGCCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MFTLRPIVIALGAGLLQACVAPPTQKELAMQPVLRVRHSADQTAATYYQLGKYHQERGNVDLARAAYAYSVELDGRQLEA
RNALAAIHAQQGRLEDAKVLLLQLVAEYPAVAHPYNNLGFVHYLQGNYDAAVATLQRALVLDSENQRTRNNLQAAKVELA
KLGERPAVARAPAPATMDTQGVLPGQATATITENRKDEMTATATAVSTPAPVPAPIPVSVPTVAVQRPAELAVSPAPAPR
TQELAVAISPSVPQARMEVVQVVPNVFELRPKPAVAAVAAVAAIAPIIADRQPEKAVVGAATLVPVPALAAARATTSPPS
VAATKMSRVEVSNGNGITGMAKRIKGVLGRYGIAVSRLTNDRPFKQQDTKIQYRAGYEQAAESLKLALRGHAVVVPVNKL
SGNTDVRLVLGKDAVAHMALIEEWASQSRLASNGEGEISNH

Sequences:

>Translated_441_residues
MFTLRPIVIALGAGLLQACVAPPTQKELAMQPVLRVRHSADQTAATYYQLGKYHQERGNVDLARAAYAYSVELDGRQLEA
RNALAAIHAQQGRLEDAKVLLLQLVAEYPAVAHPYNNLGFVHYLQGNYDAAVATLQRALVLDSENQRTRNNLQAAKVELA
KLGERPAVARAPAPATMDTQGVLPGQATATITENRKDEMTATATAVSTPAPVPAPIPVSVPTVAVQRPAELAVSPAPAPR
TQELAVAISPSVPQARMEVVQVVPNVFELRPKPAVAAVAAVAAIAPIIADRQPEKAVVGAATLVPVPALAAARATTSPPS
VAATKMSRVEVSNGNGITGMAKRIKGVLGRYGIAVSRLTNDRPFKQQDTKIQYRAGYEQAAESLKLALRGHAVVVPVNKL
SGNTDVRLVLGKDAVAHMALIEEWASQSRLASNGEGEISNH
>Mature_441_residues
MFTLRPIVIALGAGLLQACVAPPTQKELAMQPVLRVRHSADQTAATYYQLGKYHQERGNVDLARAAYAYSVELDGRQLEA
RNALAAIHAQQGRLEDAKVLLLQLVAEYPAVAHPYNNLGFVHYLQGNYDAAVATLQRALVLDSENQRTRNNLQAAKVELA
KLGERPAVARAPAPATMDTQGVLPGQATATITENRKDEMTATATAVSTPAPVPAPIPVSVPTVAVQRPAELAVSPAPAPR
TQELAVAISPSVPQARMEVVQVVPNVFELRPKPAVAAVAAVAAIAPIIADRQPEKAVVGAATLVPVPALAAARATTSPPS
VAATKMSRVEVSNGNGITGMAKRIKGVLGRYGIAVSRLTNDRPFKQQDTKIQYRAGYEQAAESLKLALRGHAVVVPVNKL
SGNTDVRLVLGKDAVAHMALIEEWASQSRLASNGEGEISNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46672; Mature: 46672

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTLRPIVIALGAGLLQACVAPPTQKELAMQPVLRVRHSADQTAATYYQLGKYHQERGNV
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCE
DLARAAYAYSVELDGRQLEARNALAAIHAQQGRLEDAKVLLLQLVAEYPAVAHPYNNLGF
EEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
VHYLQGNYDAAVATLQRALVLDSENQRTRNNLQAAKVELAKLGERPAVARAPAPATMDTQ
EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GVLPGQATATITENRKDEMTATATAVSTPAPVPAPIPVSVPTVAVQRPAELAVSPAPAPR
CCCCCCCEEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHEECCCCCCC
TQELAVAISPSVPQARMEVVQVVPNVFELRPKPAVAAVAAVAAIAPIIADRQPEKAVVGA
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCH
ATLVPVPALAAARATTSPPSVAATKMSRVEVSNGNGITGMAKRIKGVLGRYGIAVSRLTN
HHHHCCHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHEEEHHCC
DRPFKQQDTKIQYRAGYEQAAESLKLALRGHAVVVPVNKLSGNTDVRLVLGKDAVAHMAL
CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCEEEEECCHHHHHHHH
IEEWASQSRLASNGEGEISNH
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFTLRPIVIALGAGLLQACVAPPTQKELAMQPVLRVRHSADQTAATYYQLGKYHQERGNV
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCE
DLARAAYAYSVELDGRQLEARNALAAIHAQQGRLEDAKVLLLQLVAEYPAVAHPYNNLGF
EEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
VHYLQGNYDAAVATLQRALVLDSENQRTRNNLQAAKVELAKLGERPAVARAPAPATMDTQ
EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GVLPGQATATITENRKDEMTATATAVSTPAPVPAPIPVSVPTVAVQRPAELAVSPAPAPR
CCCCCCCEEEEECCCCCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHEECCCCCCC
TQELAVAISPSVPQARMEVVQVVPNVFELRPKPAVAAVAAVAAIAPIIADRQPEKAVVGA
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCH
ATLVPVPALAAARATTSPPSVAATKMSRVEVSNGNGITGMAKRIKGVLGRYGIAVSRLTN
HHHHCCHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHEEEHHCC
DRPFKQQDTKIQYRAGYEQAAESLKLALRGHAVVVPVNKLSGNTDVRLVLGKDAVAHMAL
CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCEEEEECCHHHHHHHH
IEEWASQSRLASNGEGEISNH
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA