| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yahD [C]
Identifier: 91788378
GI number: 91788378
Start: 2630261
End: 2630932
Strand: Reverse
Name: yahD [C]
Synonym: Bpro_2515
Alternate gene names: 91788378
Gene position: 2630932-2630261 (Counterclockwise)
Preceding gene: 91788379
Following gene: 91788377
Centisome position: 50.59
GC content: 55.36
Gene sequence:
>672_bases ATGAAAAAATACTTCATGAATTACATTAAAAAAACAATATACCTAATTGTTTTTATTGGATTTAATGTCGCATTTGCCGG ATCGTACGATGATTTTTTCGTTGCCATCAAACAAGATGACTCCGGCAAAATCAAGGAGCTCCTGGCGCGCGGTTTTGACG CCAATACCATTGACCCCAAAGGACAGCACGGCCTGTACCTCGCGCTTCGCGAGCCTTCGCCCAAAGCCGCGCAGGTATTG ATCGACTGGCCCAAAACCAACGTCAACGTCCTGAATGCCAAGGACGAAAGTCCACTCATGATGGCAGCGCTCAAAGGCCA ACAGGATCTGGCTGCCAAGATGATCAAAAAGGGCGCCGACATCAACAAGACCGGCTGGACACCCCTGCATTACGCCGCCA GCAGCGGGCACCTGGCCATCATCAGCCTGCTGCTTGAGAACAGCGCCTACATTGACGCCGAATCACCCAACGGCAGCACG CCCCTGATGATGGCCGCCATGTACGGGACGCCCGCGGCCGTCAAGCTGTTGCTGCAGGAAGGTGCCGACCCGCAACTCAA AAACCAGCAAGGCCTGACCGCACTGCAGTTCGCCCAACGCGGCAACCGGGTGGATTCAGCCGATGCCATCGCAGCTGCCA TACGTGGCAAGCGGCCTGCCGGCCAATGGTGA
Upstream 100 bases:
>100_bases TTGTGGCGCAGCAGATTGCCGAGCTGAAGCAGCAGTCAGTACAGGCCATTGCCGAAGCCACCAGTCATAACTTCGAGCAA CTCTTTACCGGGGTGGTTGC
Downstream 100 bases:
>100_bases AATCTGAGTTTCCGGCCAGGCTATGGTGCAGCGCTCCGGCGTGAGCAGCTTGCCTCTGGCTGGAAATGCCAGCTGTCCAC GACTCCCAGGCGGCTCCCGA
Product: ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKKYFMNYIKKTIYLIVFIGFNVAFAGSYDDFFVAIKQDDSGKIKELLARGFDANTIDPKGQHGLYLALREPSPKAAQVL IDWPKTNVNVLNAKDESPLMMAALKGQQDLAAKMIKKGADINKTGWTPLHYAASSGHLAIISLLLENSAYIDAESPNGST PLMMAAMYGTPAAVKLLLQEGADPQLKNQQGLTALQFAQRGNRVDSADAIAAAIRGKRPAGQW
Sequences:
>Translated_223_residues MKKYFMNYIKKTIYLIVFIGFNVAFAGSYDDFFVAIKQDDSGKIKELLARGFDANTIDPKGQHGLYLALREPSPKAAQVL IDWPKTNVNVLNAKDESPLMMAALKGQQDLAAKMIKKGADINKTGWTPLHYAASSGHLAIISLLLENSAYIDAESPNGST PLMMAAMYGTPAAVKLLLQEGADPQLKNQQGLTALQFAQRGNRVDSADAIAAAIRGKRPAGQW >Mature_223_residues MKKYFMNYIKKTIYLIVFIGFNVAFAGSYDDFFVAIKQDDSGKIKELLARGFDANTIDPKGQHGLYLALREPSPKAAQVL IDWPKTNVNVLNAKDESPLMMAALKGQQDLAAKMIKKGADINKTGWTPLHYAASSGHLAIISLLLENSAYIDAESPNGST PLMMAAMYGTPAAVKLLLQEGADPQLKNQQGLTALQFAQRGNRVDSADAIAAAIRGKRPAGQW
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI32967601, Length=192, Percent_Identity=30.7291666666667, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI70780355, Length=185, Percent_Identity=30.8108108108108, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI70780359, Length=185, Percent_Identity=30.8108108108108, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI70780353, Length=185, Percent_Identity=30.8108108108108, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI70780357, Length=185, Percent_Identity=30.8108108108108, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI215598574, Length=185, Percent_Identity=30.8108108108108, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI188595682, Length=185, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI52426737, Length=185, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI38569428, Length=107, Percent_Identity=42.0560747663551, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI38569426, Length=107, Percent_Identity=42.0560747663551, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI52426735, Length=185, Percent_Identity=29.7297297297297, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI30425444, Length=176, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI13376842, Length=185, Percent_Identity=32.972972972973, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI256574792, Length=153, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI118150656, Length=166, Percent_Identity=32.5301204819277, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI87239981, Length=142, Percent_Identity=34.5070422535211, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI304361760, Length=161, Percent_Identity=31.6770186335404, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI304361757, Length=161, Percent_Identity=31.6770186335404, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI68131557, Length=161, Percent_Identity=31.6770186335404, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI96975023, Length=178, Percent_Identity=30.8988764044944, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI42734375, Length=101, Percent_Identity=40.5940594059406, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI126723390, Length=180, Percent_Identity=27.2222222222222, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI24233530, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI62988328, Length=160, Percent_Identity=29.375, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI268607595, Length=160, Percent_Identity=29.375, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI41055989, Length=120, Percent_Identity=36.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI7705748, Length=184, Percent_Identity=30.9782608695652, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI163914396, Length=184, Percent_Identity=30.9782608695652, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI225543463, Length=155, Percent_Identity=30.3225806451613, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI225543461, Length=155, Percent_Identity=30.3225806451613, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI224809476, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI224809472, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI224809470, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI224809468, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI224809478, Length=190, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI224809474, Length=190, Percent_Identity=27.3684210526316, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI41327754, Length=168, Percent_Identity=31.547619047619, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI157743284, Length=161, Percent_Identity=31.6770186335404, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI55741641, Length=185, Percent_Identity=31.8918918918919, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI55770876, Length=164, Percent_Identity=31.7073170731707, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI21956645, Length=104, Percent_Identity=40.3846153846154, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI134948558, Length=125, Percent_Identity=33.6, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI134948605, Length=125, Percent_Identity=33.6, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI38683816, Length=141, Percent_Identity=31.9148936170213, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI38683807, Length=141, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI56676397, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI46519151, Length=151, Percent_Identity=33.112582781457, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI241896857, Length=125, Percent_Identity=36.8, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI46519154, Length=151, Percent_Identity=33.112582781457, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI148596917, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI156142184, Length=139, Percent_Identity=33.0935251798561, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI157739945, Length=155, Percent_Identity=30.3225806451613, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI34304381, Length=177, Percent_Identity=32.2033898305085, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI224465233, Length=179, Percent_Identity=29.608938547486, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI46519147, Length=167, Percent_Identity=32.9341317365269, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI37620163, Length=167, Percent_Identity=32.9341317365269, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI34304379, Length=206, Percent_Identity=30.0970873786408, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI156142199, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI156142197, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI116063534, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI116875852, Length=167, Percent_Identity=26.9461077844311, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI267844887, Length=160, Percent_Identity=33.75, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI157266328, Length=128, Percent_Identity=34.375, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI24041035, Length=148, Percent_Identity=31.0810810810811, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI256222430, Length=167, Percent_Identity=29.940119760479, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI89363047, Length=122, Percent_Identity=30.327868852459, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI121582655, Length=179, Percent_Identity=29.608938547486, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI41327752, Length=179, Percent_Identity=29.608938547486, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI50511945, Length=180, Percent_Identity=29.4444444444444, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI157504499, Length=187, Percent_Identity=31.5508021390374, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI140161500, Length=129, Percent_Identity=31.7829457364341, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1786511, Length=181, Percent_Identity=30.3867403314917, Blast_Score=68, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71981411, Length=180, Percent_Identity=29.4444444444444, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17542700, Length=180, Percent_Identity=29.4444444444444, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71981389, Length=180, Percent_Identity=29.4444444444444, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25145251, Length=180, Percent_Identity=29.4444444444444, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71981414, Length=211, Percent_Identity=29.3838862559242, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI212645194, Length=136, Percent_Identity=33.8235294117647, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322079, Length=104, Percent_Identity=44.2307692307692, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI161082092, Length=147, Percent_Identity=38.0952380952381, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI161082081, Length=147, Percent_Identity=38.0952380952381, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI161082110, Length=147, Percent_Identity=38.0952380952381, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI161082096, Length=147, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161082085, Length=147, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161082106, Length=147, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161082099, Length=147, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI161082089, Length=147, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI281359521, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281359519, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28558752, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28558750, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28558756, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28558754, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571867, Length=164, Percent_Identity=32.3170731707317, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI28571865, Length=164, Percent_Identity=32.3170731707317, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI21356741, Length=142, Percent_Identity=33.8028169014084, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24581260, Length=187, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24581258, Length=187, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24650843, Length=154, Percent_Identity=29.8701298701299, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI45553307, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644921, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644919, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24639454, Length=146, Percent_Identity=31.5068493150685, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI17998549, Length=143, Percent_Identity=30.0699300699301, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221472807, Length=106, Percent_Identity=34.9056603773585, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330478, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330474, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330482, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552223, Length=106, Percent_Identity=34.9056603773585, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550479, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573593, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363919, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330476, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330480, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551135, Length=187, Percent_Identity=27.807486631016, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281362364, Length=134, Percent_Identity=32.8358208955224, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24583835, Length=150, Percent_Identity=31.3333333333333, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 24244; Mature: 24244
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFMNYIKKTIYLIVFIGFNVAFAGSYDDFFVAIKQDDSGKIKELLARGFDANTIDPK CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCC GQHGLYLALREPSPKAAQVLIDWPKTNVNVLNAKDESPLMMAALKGQQDLAAKMIKKGAD CCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCC INKTGWTPLHYAASSGHLAIISLLLENSAYIDAESPNGSTPLMMAAMYGTPAAVKLLLQE CCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHC GADPQLKNQQGLTALQFAQRGNRVDSADAIAAAIRGKRPAGQW CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKYFMNYIKKTIYLIVFIGFNVAFAGSYDDFFVAIKQDDSGKIKELLARGFDANTIDPK CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCC GQHGLYLALREPSPKAAQVLIDWPKTNVNVLNAKDESPLMMAALKGQQDLAAKMIKKGAD CCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCC INKTGWTPLHYAASSGHLAIISLLLENSAYIDAESPNGSTPLMMAAMYGTPAAVKLLLQE CCCCCCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHC GADPQLKNQQGLTALQFAQRGNRVDSADAIAAAIRGKRPAGQW CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]