| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788352
Identifier: 91788352
GI number: 91788352
Start: 2607732
End: 2608931
Strand: Reverse
Name: 91788352
Synonym: Bpro_2489
Alternate gene names: NA
Gene position: 2608931-2607732 (Counterclockwise)
Preceding gene: 91788353
Following gene: 91788351
Centisome position: 50.17
GC content: 64.17
Gene sequence:
>1200_bases ATGGTCGCCAAGGCGATGAGGGGGTTTGGCGACGGCTTTGTCAGCCTGCTGCTGCCGGTCTACCTGCTCAATCTTGGGCT GTCGGCCTTTCAGGTCGGCCTCATCGCGACCACGACCTTGCTGGGGTCCGGCGTGCTGACGCTCCTCATTGGCCTCCATG CGTCGCGCTTCGACCACCGGCCCTTGCTGCTGGCGGCCTCGGCATTGATGGCGCTCACGGGCCTGGGCTTCGCGTCGCTG GACAGCTTTTGGCCGCTGATGCTGGTGGCGCTGGTGGGCACGCTGAATCCATCGGGCGGCGATGTGAGCATTTTTATGCC GGTGGAGCATGCGATGCTGGCCGGCCATGCCCAAGGCCCGAGCCGCACGGCTGTCTTTGCGCGCTACAGCCTGACGGGAA CCCTGTTTGCGGCCTTTGGGTCCCTGGCCGCGGCCTTGCCCGCATTGGCGGCTCCGGTGGCGGGCATTACGACGCAGACC GCCATCCAGGGGATGTTCATCCTGTATGCCTTGCTGGCTCTGGTGATGGCCGGACTGTATCGCGGTTTGCCGTCACGGCC TGCCGAGCAAGCCGCCGAACCGGTTTCGGCGCTGGGTCCTTCCAAAAAGCGGGTCTACCTGCTGGCGACGCTGTTCAGCC TGGACGCTTTCGGCGGGGGATTTGTGGTTCAGTCGCTGGTGGCCCTGTGGCTGTACCAGCGCTTTGGCCTCTCGATCGAA GTGGCCGGCTCGATCTTTTTCTGGGCCGGCCTGCTGACCGCGTTTTCCTACTTGGCGGCGGCTCATATCGCGAGCCGCAT TGGTTTGGTGAAGACCATGGTCTATACCCATCTGCCGTCCAGCCTGTGCCTGATCGCGATTCCGTTTTGTGCCGACCTGA CTTACGCGGTCATTCTGCTGCTGGTCAGGAGCGCGCTGTCACAGATGGACGTGCCTACGCGAAGCTCTTATGTCATGGCC ATCGTGACACCGCAGGAGCGCGCCGCGGCAGCCAGCGTGACATCCGTGCCGCGCAGCCTGGCTGCTGCCGCCAGTCCCGC GTTGGCAGGCTATCTCCTGGGCATGTCTGCATTCGGATGGCCGCTGATCGTGGGTGGAGCCCTGAAGATCGTCTACGACA TCCTGCTGCTGACCATGTTCAGCCGTGTGCAACCGCCCGAGGAGCTTCCCGGCGCAGAGCATCCAGCCAAAACCGGCTGA
Upstream 100 bases:
>100_bases AGGGACCGGCGCAGCTGGAGTCGACGATTACCTGGCGCCGGATATCCCCTTGAACTCAACGGCCGTGCCTGTTTTTCGGC TCACCCCTCTCAACCGGCTG
Downstream 100 bases:
>100_bases ACCTTGACCTCAGTCAACTTGAATGTGCGACTGGCGGCCGACCTTCCGAATGGCAGCCGTGGCCAGGTCTGTCCACGCAT ACCAACGCCGCGCCTGAATC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MVAKAMRGFGDGFVSLLLPVYLLNLGLSAFQVGLIATTTLLGSGVLTLLIGLHASRFDHRPLLLAASALMALTGLGFASL DSFWPLMLVALVGTLNPSGGDVSIFMPVEHAMLAGHAQGPSRTAVFARYSLTGTLFAAFGSLAAALPALAAPVAGITTQT AIQGMFILYALLALVMAGLYRGLPSRPAEQAAEPVSALGPSKKRVYLLATLFSLDAFGGGFVVQSLVALWLYQRFGLSIE VAGSIFFWAGLLTAFSYLAAAHIASRIGLVKTMVYTHLPSSLCLIAIPFCADLTYAVILLLVRSALSQMDVPTRSSYVMA IVTPQERAAAASVTSVPRSLAAAASPALAGYLLGMSAFGWPLIVGGALKIVYDILLLTMFSRVQPPEELPGAEHPAKTG
Sequences:
>Translated_399_residues MVAKAMRGFGDGFVSLLLPVYLLNLGLSAFQVGLIATTTLLGSGVLTLLIGLHASRFDHRPLLLAASALMALTGLGFASL DSFWPLMLVALVGTLNPSGGDVSIFMPVEHAMLAGHAQGPSRTAVFARYSLTGTLFAAFGSLAAALPALAAPVAGITTQT AIQGMFILYALLALVMAGLYRGLPSRPAEQAAEPVSALGPSKKRVYLLATLFSLDAFGGGFVVQSLVALWLYQRFGLSIE VAGSIFFWAGLLTAFSYLAAAHIASRIGLVKTMVYTHLPSSLCLIAIPFCADLTYAVILLLVRSALSQMDVPTRSSYVMA IVTPQERAAAASVTSVPRSLAAAASPALAGYLLGMSAFGWPLIVGGALKIVYDILLLTMFSRVQPPEELPGAEHPAKTG >Mature_399_residues MVAKAMRGFGDGFVSLLLPVYLLNLGLSAFQVGLIATTTLLGSGVLTLLIGLHASRFDHRPLLLAASALMALTGLGFASL DSFWPLMLVALVGTLNPSGGDVSIFMPVEHAMLAGHAQGPSRTAVFARYSLTGTLFAAFGSLAAALPALAAPVAGITTQT AIQGMFILYALLALVMAGLYRGLPSRPAEQAAEPVSALGPSKKRVYLLATLFSLDAFGGGFVVQSLVALWLYQRFGLSIE VAGSIFFWAGLLTAFSYLAAAHIASRIGLVKTMVYTHLPSSLCLIAIPFCADLTYAVILLLVRSALSQMDVPTRSSYVMA IVTPQERAAAASVTSVPRSLAAAASPALAGYLLGMSAFGWPLIVGGALKIVYDILLLTMFSRVQPPEELPGAEHPAKTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322584, Length=412, Percent_Identity=24.2718446601942, Blast_Score=112, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41644; Mature: 41644
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAKAMRGFGDGFVSLLLPVYLLNLGLSAFQVGLIATTTLLGSGVLTLLIGLHASRFDHR CCCHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLLLAASALMALTGLGFASLDSFWPLMLVALVGTLNPSGGDVSIFMPVEHAMLAGHAQGP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCC SRTAVFARYSLTGTLFAAFGSLAAALPALAAPVAGITTQTAIQGMFILYALLALVMAGLY CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGLPSRPAEQAAEPVSALGPSKKRVYLLATLFSLDAFGGGFVVQSLVALWLYQRFGLSIE CCCCCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEE VAGSIFFWAGLLTAFSYLAAAHIASRIGLVKTMVYTHLPSSLCLIAIPFCADLTYAVILL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LVRSALSQMDVPTRSSYVMAIVTPQERAAAASVTSVPRSLAAAASPALAGYLLGMSAFGW HHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIVGGALKIVYDILLLTMFSRVQPPEELPGAEHPAKTG HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC >Mature Secondary Structure MVAKAMRGFGDGFVSLLLPVYLLNLGLSAFQVGLIATTTLLGSGVLTLLIGLHASRFDHR CCCHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLLLAASALMALTGLGFASLDSFWPLMLVALVGTLNPSGGDVSIFMPVEHAMLAGHAQGP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCC SRTAVFARYSLTGTLFAAFGSLAAALPALAAPVAGITTQTAIQGMFILYALLALVMAGLY CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGLPSRPAEQAAEPVSALGPSKKRVYLLATLFSLDAFGGGFVVQSLVALWLYQRFGLSIE CCCCCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEE VAGSIFFWAGLLTAFSYLAAAHIASRIGLVKTMVYTHLPSSLCLIAIPFCADLTYAVILL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LVRSALSQMDVPTRSSYVMAIVTPQERAAAASVTSVPRSLAAAASPALAGYLLGMSAFGW HHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLIVGGALKIVYDILLLTMFSRVQPPEELPGAEHPAKTG HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA