| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788351
Identifier: 91788351
GI number: 91788351
Start: 2606399
End: 2607496
Strand: Reverse
Name: 91788351
Synonym: Bpro_2488
Alternate gene names: NA
Gene position: 2607496-2606399 (Counterclockwise)
Preceding gene: 91788352
Following gene: 91788345
Centisome position: 50.14
GC content: 65.66
Gene sequence:
>1098_bases ATGGCCAGAGCCGGGATTTACAAGTCTGAAGTGCTGCGCGCCCGCGATAAATTGCTGGCCACGGGGCGCAATCCGTCCAT CGACGCCGTGCGCGAAGAGCTGGGCAGCGGCTCCAAAACCACGATCCATCGCTACCTGAAGGAGATCGAGGAAGAGGAAG GGCCGGCCACCGGCAGCCGGGTGGCCGTCAGCGAGGCGATCCAGGATCTGGTGGGCCGCCTGGCGGCCCGGGTCAACGAG GAAGCGGAGGAGCGGGTCACCACGGCGCAGGCCAGGCACGTCGAGCAGCTGACCCAGCACCAGCAAGCCGCTGCGGCCCT GAAAACCGAGGCCCAGTCCACGCGCCAGCAGCTGGAGCAAACCCAGCGGATCTTGGCCGAGGAAAAGACCGCTCACGGCA AAACCAGCGAAGCGCTGAACGGCAAGACCCTTGAATGCACGCAGCTCGCCCAGCAGGTGGCCGACCTGCAGGAGCGCATC GCGGCCGAAGAACGCCATCGCCAATCCCTGGAAGAAAAGCACCAGCATGCGCGCCAGGCGCTGGAGCATTTCCGGCAATC CAGCAAGGAGCAGCGCGAGCAGGACCAGCGCAAGCACGAGCAGCAGGTGCAGTACCTGCAGGCCGAATTGCGCACCGTGA ACGAGACCTTGGCCACCAAGCAGCAGGAAGCGGTCCACACCCTTCAGGACAACGCGCGTTTGCTGGGCGATTTGTCGCGC GCCCAGGGCGATCTGCACCAGGCCCAGGAAGAGGTGCGGGGCCTGCGGCCGCTCAAGGAGGAGCTGGGGTTTGCGCAACG GCGCACCGAGGAGCTGGGCCGGCGCCTGGTCGAGCAGGACAGTGCCGTCCAGCAGCTCAGCACCTCGAACGAGCAGTTGC AAGCCAAGGTCGACGAGCTGCTCACCGCGAAGCAGCAGGTGGAACTGGCGCTGGCGACGGCTAGGTCATCCGTCACGGCT CAGGAGCAGGTCGTGGCCAGCATGCTGGAGCGTTTCAGTGTGCCGGCGCCTGGGCCTGATGTGGTTGTGAGCCCGGCTGA AGGGGCCGTTCGACCAGCGAAGAGGGAATCGAAAAAGCCAACGGGGACAAGGACTTAA
Upstream 100 bases:
>100_bases TTACCCAATGTTAGATTTATCGAAATATCCAACTCCTTGACCTCATAAATAGTATGTAATATCATGGTACATACTATAGT ACGAAATAAAGAGGTGGGCC
Downstream 100 bases:
>100_bases GTGCGTTTCTGCGAAATTTTCAGGAATCACGGCCGACCCTCGAATGGGCACGGCCGATCATGCAAGCCGCCATCGAGCTG CCGGAGTACGGCCAGCTGCG
Product: cointegrate resolution protein T
Products: NA
Alternate protein names: TnpT Protein; Integrase-Like Protein; Phage Cointegrase Resolution Protein; Transposon Cointegrate Resolution Protein; Citron Protein
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MARAGIYKSEVLRARDKLLATGRNPSIDAVREELGSGSKTTIHRYLKEIEEEEGPATGSRVAVSEAIQDLVGRLAARVNE EAEERVTTAQARHVEQLTQHQQAAAALKTEAQSTRQQLEQTQRILAEEKTAHGKTSEALNGKTLECTQLAQQVADLQERI AAEERHRQSLEEKHQHARQALEHFRQSSKEQREQDQRKHEQQVQYLQAELRTVNETLATKQQEAVHTLQDNARLLGDLSR AQGDLHQAQEEVRGLRPLKEELGFAQRRTEELGRRLVEQDSAVQQLSTSNEQLQAKVDELLTAKQQVELALATARSSVTA QEQVVASMLERFSVPAPGPDVVVSPAEGAVRPAKRESKKPTGTRT
Sequences:
>Translated_365_residues MARAGIYKSEVLRARDKLLATGRNPSIDAVREELGSGSKTTIHRYLKEIEEEEGPATGSRVAVSEAIQDLVGRLAARVNE EAEERVTTAQARHVEQLTQHQQAAAALKTEAQSTRQQLEQTQRILAEEKTAHGKTSEALNGKTLECTQLAQQVADLQERI AAEERHRQSLEEKHQHARQALEHFRQSSKEQREQDQRKHEQQVQYLQAELRTVNETLATKQQEAVHTLQDNARLLGDLSR AQGDLHQAQEEVRGLRPLKEELGFAQRRTEELGRRLVEQDSAVQQLSTSNEQLQAKVDELLTAKQQVELALATARSSVTA QEQVVASMLERFSVPAPGPDVVVSPAEGAVRPAKRESKKPTGTRT >Mature_364_residues ARAGIYKSEVLRARDKLLATGRNPSIDAVREELGSGSKTTIHRYLKEIEEEEGPATGSRVAVSEAIQDLVGRLAARVNEE AEERVTTAQARHVEQLTQHQQAAAALKTEAQSTRQQLEQTQRILAEEKTAHGKTSEALNGKTLECTQLAQQVADLQERIA AEERHRQSLEEKHQHARQALEHFRQSSKEQREQDQRKHEQQVQYLQAELRTVNETLATKQQEAVHTLQDNARLLGDLSRA QGDLHQAQEEVRGLRPLKEELGFAQRRTEELGRRLVEQDSAVQQLSTSNEQLQAKVDELLTAKQQVELALATARSSVTAQ EQVVASMLERFSVPAPGPDVVVSPAEGAVRPAKRESKKPTGTRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40741; Mature: 40610
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAGIYKSEVLRARDKLLATGRNPSIDAVREELGSGSKTTIHRYLKEIEEEEGPATGSR CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH VAVSEAIQDLVGRLAARVNEEAEERVTTAQARHVEQLTQHQQAAAALKTEAQSTRQQLEQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQRILAEEKTAHGKTSEALNGKTLECTQLAQQVADLQERIAAEERHRQSLEEKHQHARQA HHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHFRQSSKEQREQDQRKHEQQVQYLQAELRTVNETLATKQQEAVHTLQDNARLLGDLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQGDLHQAQEEVRGLRPLKEELGFAQRRTEELGRRLVEQDSAVQQLSTSNEQLQAKVDEL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LTAKQQVELALATARSSVTAQEQVVASMLERFSVPAPGPDVVVSPAEGAVRPAKRESKKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHCCCC TGTRT CCCCC >Mature Secondary Structure ARAGIYKSEVLRARDKLLATGRNPSIDAVREELGSGSKTTIHRYLKEIEEEEGPATGSR CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHH VAVSEAIQDLVGRLAARVNEEAEERVTTAQARHVEQLTQHQQAAAALKTEAQSTRQQLEQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQRILAEEKTAHGKTSEALNGKTLECTQLAQQVADLQERIAAEERHRQSLEEKHQHARQA HHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHFRQSSKEQREQDQRKHEQQVQYLQAELRTVNETLATKQQEAVHTLQDNARLLGDLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQGDLHQAQEEVRGLRPLKEELGFAQRRTEELGRRLVEQDSAVQQLSTSNEQLQAKVDEL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LTAKQQVELALATARSSVTAQEQVVASMLERFSVPAPGPDVVVSPAEGAVRPAKRESKKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHCCCC TGTRT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA