| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is paaF [C]
Identifier: 91788338
GI number: 91788338
Start: 2588037
End: 2588825
Strand: Reverse
Name: paaF [C]
Synonym: Bpro_2473
Alternate gene names: 91788338
Gene position: 2588825-2588037 (Counterclockwise)
Preceding gene: 91788340
Following gene: 91788337
Centisome position: 49.78
GC content: 69.46
Gene sequence:
>789_bases ATGACAACAACAACTTACGCAGGCCTGCAACTGGAACTGCGCGGCCACACCGCCGTGCTGACCCTGGCCAACCCGCCCGC CAACACCTGGACAGCGCAAAGCCTGGCCGCGCTCACGCAACTGGTGAGCGAGCTGAACGCCAGGCGCGAGATCTACAGCC TGGTCGTCACCGGCCAGGGCGAGAAGTTTTTTTCGGCCGGCGCCGACCTCAAGCTGTTTGCCGATGGCGACAAGGCCGTG GCGCGCGAGATGGCGCGCCGCTTCGGCGAGGCGTTTGAAGCGCTGGCCGGTTTTCGCGGCCTGTCGATTGCCGCGATCAA CGGCTACGCCATGGGCGGCGGGCTCGAATGCGCGCTGGCCTGCGACCTGCGCATCGCCGAAGAGCAAGCCCAATTGGCGC TGCCCGAAGCCGCTGTCGGCCTGTTGCCCTGCGCCGGCGGCACGCAGTGGCTGAGCTGGGCCGTGGGCGAAGCCTGGGCC AAGCGCATGGTGCTGTGCGGCGAGCGCGTGGACGCGGCCACCGCGCTGCGCATCGGCCTGGTCGAAGAAGTCGTGCCGCG CGGCCAGGCGTTGGCGCAGGCCCTGCTGCTGGCAGCGCGTGTGGAACAGCAAAGCCCGACCAGCGTGGCCGCCTGCAAGC GCCTGATTCAGGGGGCGCGCACGCAGTCGCCCGCCGCCACCCTGGTGGCCGAGCGCGAGGCTTTTGTCGACTTGTTCGAC AGCCAGGACCAGCGCGAAGGCGTGAGCGCCTTTCTGGCCAAGCGCGCGCCGGTCTGGCGCAATGCGTGA
Upstream 100 bases:
>100_bases GCGTGCACCAGATCGTGGAAGGCACCAACGAAATCATGCGCGTGATCGTCTCGCGCCGCATGCTGGAAACCGACAACACA GACAACACCGAGGAAATCCG
Downstream 100 bases:
>100_bases AGGAAAATATGAACCCCCACGCTCACATTCGTTCGCTGCCCCGCGAGGGGGCTGAGTGCCGCGGCTCCGAGCCTGCCGAC GCAGGCTTGGACGGCACGAA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTTTTYAGLQLELRGHTAVLTLANPPANTWTAQSLAALTQLVSELNARREIYSLVVTGQGEKFFSAGADLKLFADGDKAV AREMARRFGEAFEALAGFRGLSIAAINGYAMGGGLECALACDLRIAEEQAQLALPEAAVGLLPCAGGTQWLSWAVGEAWA KRMVLCGERVDAATALRIGLVEEVVPRGQALAQALLLAARVEQQSPTSVAACKRLIQGARTQSPAATLVAEREAFVDLFD SQDQREGVSAFLAKRAPVWRNA
Sequences:
>Translated_262_residues MTTTTYAGLQLELRGHTAVLTLANPPANTWTAQSLAALTQLVSELNARREIYSLVVTGQGEKFFSAGADLKLFADGDKAV AREMARRFGEAFEALAGFRGLSIAAINGYAMGGGLECALACDLRIAEEQAQLALPEAAVGLLPCAGGTQWLSWAVGEAWA KRMVLCGERVDAATALRIGLVEEVVPRGQALAQALLLAARVEQQSPTSVAACKRLIQGARTQSPAATLVAEREAFVDLFD SQDQREGVSAFLAKRAPVWRNA >Mature_261_residues TTTTYAGLQLELRGHTAVLTLANPPANTWTAQSLAALTQLVSELNARREIYSLVVTGQGEKFFSAGADLKLFADGDKAVA REMARRFGEAFEALAGFRGLSIAAINGYAMGGGLECALACDLRIAEEQAQLALPEAAVGLLPCAGGTQWLSWAVGEAWAK RMVLCGERVDAATALRIGLVEEVVPRGQALAQALLLAARVEQQSPTSVAACKRLIQGARTQSPAATLVAEREAFVDLFDS QDQREGVSAFLAKRAPVWRNA
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=256, Percent_Identity=33.203125, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI68989263, Length=205, Percent_Identity=34.1463414634146, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4502327, Length=237, Percent_Identity=29.1139240506329, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI20127408, Length=195, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31542718, Length=244, Percent_Identity=26.6393442622951, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI261878539, Length=108, Percent_Identity=41.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI37594469, Length=181, Percent_Identity=28.7292817679558, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI37594471, Length=181, Percent_Identity=28.7292817679558, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI157694516, Length=235, Percent_Identity=28.936170212766, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI213417737, Length=235, Percent_Identity=28.936170212766, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI62530384, Length=238, Percent_Identity=26.0504201680672, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787659, Length=245, Percent_Identity=40, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI221142681, Length=268, Percent_Identity=34.7014925373134, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1788682, Length=225, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790281, Length=163, Percent_Identity=31.9018404907975, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87082183, Length=240, Percent_Identity=24.5833333333333, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788597, Length=246, Percent_Identity=24.390243902439, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787660, Length=244, Percent_Identity=31.1475409836066, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=35.408560311284, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17554946, Length=249, Percent_Identity=32.5301204819277, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17540714, Length=222, Percent_Identity=28.8288288288288, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17558304, Length=192, Percent_Identity=30.7291666666667, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25144276, Length=191, Percent_Identity=34.5549738219895, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17508951, Length=191, Percent_Identity=34.5549738219895, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17508953, Length=191, Percent_Identity=34.5549738219895, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536985, Length=223, Percent_Identity=27.3542600896861, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17540306, Length=255, Percent_Identity=30.1960784313725, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560910, Length=208, Percent_Identity=28.3653846153846, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=264, Percent_Identity=32.5757575757576, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI24653477, Length=264, Percent_Identity=32.5757575757576, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=29.3650793650794, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24650670, Length=228, Percent_Identity=30.2631578947368, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI19922422, Length=252, Percent_Identity=21.4285714285714, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21357171, Length=96, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI45550169, Length=258, Percent_Identity=23.6434108527132, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19921018, Length=187, Percent_Identity=26.7379679144385, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 27802; Mature: 27671
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTYAGLQLELRGHTAVLTLANPPANTWTAQSLAALTQLVSELNARREIYSLVVTGQG CCCCEEECEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC EKFFSAGADLKLFADGDKAVAREMARRFGEAFEALAGFRGLSIAAINGYAMGGGLECALA CHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCEEEEE CDLRIAEEQAQLALPEAAVGLLPCAGGTQWLSWAVGEAWAKRMVLCGERVDAATALRIGL ECEEEHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VEEVVPRGQALAQALLLAARVEQQSPTSVAACKRLIQGARTQSPAATLVAEREAFVDLFD HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SQDQREGVSAFLAKRAPVWRNA CCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTTYAGLQLELRGHTAVLTLANPPANTWTAQSLAALTQLVSELNARREIYSLVVTGQG CCCEEECEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC EKFFSAGADLKLFADGDKAVAREMARRFGEAFEALAGFRGLSIAAINGYAMGGGLECALA CHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCEEEEE CDLRIAEEQAQLALPEAAVGLLPCAGGTQWLSWAVGEAWAKRMVLCGERVDAATALRIGL ECEEEHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VEEVVPRGQALAQALLLAARVEQQSPTSVAACKRLIQGARTQSPAATLVAEREAFVDLFD HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SQDQREGVSAFLAKRAPVWRNA CCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA