| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fadB1 [H]
Identifier: 91788337
GI number: 91788337
Start: 2586742
End: 2587851
Strand: Reverse
Name: fadB1 [H]
Synonym: Bpro_2472
Alternate gene names: 91788337
Gene position: 2587851-2586742 (Counterclockwise)
Preceding gene: 91788338
Following gene: 91788336
Centisome position: 49.76
GC content: 68.56
Gene sequence:
>1110_bases ATGACCGACGTTGTACTCTTTGACGAGCTGCCTACGGCCTGCGGCCGGCGTTTTGGCCTGGCCACGCTCAACGCGCCCGC CACGCTCAACGCCCTGTCCCTGCCCATGGTGCAGGCACTGACACCGGCGCTGCGTGCCTGGGCGGCGGACCCCGGCATGG CGGGTGTGGTGCTGCAGGCCAGCGGTGACAAGGCCTTTTGCGCAGGCGGCGACCTGCGCGAGCTTTACCAGTCCATGCGC GACTGCGGCGCCGGCCCCAACCCCTATGCGCAGGGTTTTTTTGCGCAGGAATACCAGCTCGACCACCTGATTCACCGCTA CCCCAAGCCGCTGCTGTGCTGGGGCCACGGCATTGTTATGGGCGGCGGCATCGGCCTGCTGGCCGGCGCCTCACACCGGG TGGTGACCACCACCAGCAAGCTGGCCATGCCGGAAATCAGCATAGGCCTGTACCCGGATGTGGGCGGCAGCTGGTTTTTG CGCCGCATGCCGGGCAGGGTCGGCCTGTTTCTGGCGCTGACGGGCGCGCCGCTCAACGCGGCCGATGCGCTGTTTTGCGG CCTGGCGGACTTTCATGTCGGCGCGACCAGCCGGGCCGAGCTGCTGGCCGCCATCGGCGCGGCGAAGTGGGGCGATGCGG CGGGCGACAACCACGCCGAACTCTCGCGCCTGCTGGCGTGCCATGCAACCGATACACAGGCTGAATCCAGGCTGCGCCTG CACTTCGACCAGATCAACGCGCTGATGGCCGGCGATGACCTGCTGGACATCGCGGCGCGGCTGCGCAGCCTGCAAAGCGA CGACCCCTGGCTGGCGGCTGCGGCCGCCACCTTTACCAAAGGTTCGCCGACCTCGGCTGCGCTGGCTTTCGCGCTGTGGC AGCGGGTGCACCACCTGTCGCTGGCCGAGGTGTTCCGCCTGGAATACCGGGTCTCGCTGGGCTGCTGCGCCCACCCCGAC TTTGCCGAGGGCATACGCGCGCTGCTGATCGACAAGGACCGCCAGCCGCGCTGGTCGCCTCCGGTACTGGAGCAGGTCAC GCCTGAGCTGATTGAAGACCACTTCAAGCCCCGTTTTGCCGCCCCGCACCCGCTGGCGGCGCTGAGCTGA
Upstream 100 bases:
>100_bases CTTGGACGGCACGAAGAACTGCTGCGTCTCGCAGCAGTGCGGTCTGCAAGACCAGGCCACCTTTGAGGCGGCTCGGCAGG AGGCCACCATGACCGATGCA
Downstream 100 bases:
>100_bases GCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCGTCCATGATTGAGACATT CACCAGTCATGACGTCCCAC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTDVVLFDELPTACGRRFGLATLNAPATLNALSLPMVQALTPALRAWAADPGMAGVVLQASGDKAFCAGGDLRELYQSMR DCGAGPNPYAQGFFAQEYQLDHLIHRYPKPLLCWGHGIVMGGGIGLLAGASHRVVTTTSKLAMPEISIGLYPDVGGSWFL RRMPGRVGLFLALTGAPLNAADALFCGLADFHVGATSRAELLAAIGAAKWGDAAGDNHAELSRLLACHATDTQAESRLRL HFDQINALMAGDDLLDIAARLRSLQSDDPWLAAAAATFTKGSPTSAALAFALWQRVHHLSLAEVFRLEYRVSLGCCAHPD FAEGIRALLIDKDRQPRWSPPVLEQVTPELIEDHFKPRFAAPHPLAALS
Sequences:
>Translated_369_residues MTDVVLFDELPTACGRRFGLATLNAPATLNALSLPMVQALTPALRAWAADPGMAGVVLQASGDKAFCAGGDLRELYQSMR DCGAGPNPYAQGFFAQEYQLDHLIHRYPKPLLCWGHGIVMGGGIGLLAGASHRVVTTTSKLAMPEISIGLYPDVGGSWFL RRMPGRVGLFLALTGAPLNAADALFCGLADFHVGATSRAELLAAIGAAKWGDAAGDNHAELSRLLACHATDTQAESRLRL HFDQINALMAGDDLLDIAARLRSLQSDDPWLAAAAATFTKGSPTSAALAFALWQRVHHLSLAEVFRLEYRVSLGCCAHPD FAEGIRALLIDKDRQPRWSPPVLEQVTPELIEDHFKPRFAAPHPLAALS >Mature_368_residues TDVVLFDELPTACGRRFGLATLNAPATLNALSLPMVQALTPALRAWAADPGMAGVVLQASGDKAFCAGGDLRELYQSMRD CGAGPNPYAQGFFAQEYQLDHLIHRYPKPLLCWGHGIVMGGGIGLLAGASHRVVTTTSKLAMPEISIGLYPDVGGSWFLR RMPGRVGLFLALTGAPLNAADALFCGLADFHVGATSRAELLAAIGAAKWGDAAGDNHAELSRLLACHATDTQAESRLRLH FDQINALMAGDDLLDIAARLRSLQSDDPWLAAAAATFTKGSPTSAALAFALWQRVHHLSLAEVFRLEYRVSLGCCAHPDF AEGIRALLIDKDRQPRWSPPVLEQVTPELIEDHFKPRFAAPHPLAALS
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=343, Percent_Identity=36.1516034985423, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI37594469, Length=303, Percent_Identity=34.983498349835, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI194097323, Length=172, Percent_Identity=34.8837209302326, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI31542718, Length=167, Percent_Identity=28.1437125748503, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787659, Length=183, Percent_Identity=28.4153005464481, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788682, Length=177, Percent_Identity=28.8135593220339, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI25144160, Length=339, Percent_Identity=39.2330383480826, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI25144157, Length=339, Percent_Identity=39.2330383480826, Blast_Score=231, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6320241, Length=351, Percent_Identity=27.6353276353276, Blast_Score=122, Evalue=8e-29, Organism=Drosophila melanogaster, GI28571729, Length=339, Percent_Identity=36.283185840708, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28571730, Length=339, Percent_Identity=36.283185840708, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI20129971, Length=236, Percent_Identity=30.9322033898305, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24653477, Length=236, Percent_Identity=30.9322033898305, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 39504; Mature: 39373
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVVLFDELPTACGRRFGLATLNAPATLNALSLPMVQALTPALRAWAADPGMAGVVLQA CCCEEEECCCCHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE SGDKAFCAGGDLRELYQSMRDCGAGPNPYAQGFFAQEYQLDHLIHRYPKPLLCWGHGIVM CCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCEEE GGGIGLLAGASHRVVTTTSKLAMPEISIGLYPDVGGSWFLRRMPGRVGLFLALTGAPLNA ECCCCEECCCCCEEEEEHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCH ADALFCGLADFHVGATSRAELLAAIGAAKWGDAAGDNHAELSRLLACHATDTQAESRLRL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH HFDQINALMAGDDLLDIAARLRSLQSDDPWLAAAAATFTKGSPTSAALAFALWQRVHHLS HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAEVFRLEYRVSLGCCAHPDFAEGIRALLIDKDRQPRWSPPVLEQVTPELIEDHFKPRFA HHHHHHHHHHEEECCCCCCCHHHHHHEEHCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCC APHPLAALS CCCCCCCCC >Mature Secondary Structure TDVVLFDELPTACGRRFGLATLNAPATLNALSLPMVQALTPALRAWAADPGMAGVVLQA CCEEEECCCCHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE SGDKAFCAGGDLRELYQSMRDCGAGPNPYAQGFFAQEYQLDHLIHRYPKPLLCWGHGIVM CCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCEEE GGGIGLLAGASHRVVTTTSKLAMPEISIGLYPDVGGSWFLRRMPGRVGLFLALTGAPLNA ECCCCEECCCCCEEEEEHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCH ADALFCGLADFHVGATSRAELLAAIGAAKWGDAAGDNHAELSRLLACHATDTQAESRLRL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH HFDQINALMAGDDLLDIAARLRSLQSDDPWLAAAAATFTKGSPTSAALAFALWQRVHHLS HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAEVFRLEYRVSLGCCAHPDFAEGIRALLIDKDRQPRWSPPVLEQVTPELIEDHFKPRFA HHHHHHHHHHEEECCCCCCCHHHHHHEEHCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCC APHPLAALS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751302; 11481430 [H]