Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788327

Identifier: 91788327

GI number: 91788327

Start: 2567892

End: 2568491

Strand: Direct

Name: 91788327

Synonym: Bpro_2462

Alternate gene names: NA

Gene position: 2567892-2568491 (Clockwise)

Preceding gene: 91788326

Following gene: 91788328

Centisome position: 49.38

GC content: 63.0

Gene sequence:

>600_bases
ATGGAAATTCTGATCAACATATTGCGCGCTGCAGCGCGCTTGCGCCCAGGCAGCGCCTTGGCTGTTGTGGCATTGGGCAT
GGTGCTCTTGCCCGGCAAGGCCAGCGCGGCCGACGAATCGGTGGAATACGCCGTCAAAGCGGCTTTTCTGCACAAGTTCG
GCTCCTTTGTCGAATGGCCTGCAACAGCCTTTGCTTCACCGACCAGTCCGTTTCAGCTGTGCGTCGTGGGCGAGGATCCG
TTCGGTGCCGCCCTCGACAAGGCCGTCAGCGGCCAGCAGATCGCCCGACGGCCGGTCGAGGTGCGGCGACTGAAGATGGT
CAAACCGGACTCAGGCTGCCACATCGTGTACCTTGCCGCCTCGGAGGCGCAGCGCAGCGCCCAGATCATCGAAGCGCTAC
GCGGCAGCAGCGTGCTAACGGTGAGTGATGGCCGGTCGCCCGGGGCGGTCACGGGAATCATCAATTTCGTCATCAAGGAT
GATCGGGTGCGCTTTGACATCGACGACGAAGCCGCCGCGCAGAACAGGCTGGCCATCAGTTCCAAGCTGCTGAGCGTAGC
GCTCAGCGTCAAGCCCAGACGGGTCGGGGAGGGCCGTTAA

Upstream 100 bases:

>100_bases
TTTCGTTGACCGCATTCAACCTGCTTGACAAGGGTCATCCGGAGTTCGGTTCCGGATCGGCGCGCAGTGAGATCGGGCGC
AGCTTCTACGCAAAAATGCT

Downstream 100 bases:

>100_bases
ATGGACTGGCTTGCAAACGTTCCGATTCGCACCAAACTGCTGCTGATCAGCGTGCTGACCAGCGCGATTGCGCTGCTGCT
GGCCGGTGCGGCCATCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP
FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD
DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR

Sequences:

>Translated_199_residues
MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP
FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD
DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR
>Mature_199_residues
MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWPATAFASPTSPFQLCVVGEDP
FGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAASEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKD
DRVRFDIDDEAAAQNRLAISSKLLSVALSVKPRRVGEGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21139; Mature: 21139

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWP
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCC
ATAFASPTSPFQLCVVGEDPFGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAA
CHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHEEEECCCCCCEEEEEEC
SEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKDDRVRFDIDDEAAAQNRLAIS
CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEECCEEEEECCCHHHHHHHHHHH
SKLLSVALSVKPRRVGEGR
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEILINILRAAARLRPGSALAVVALGMVLLPGKASAADESVEYAVKAAFLHKFGSFVEWP
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCC
ATAFASPTSPFQLCVVGEDPFGAALDKAVSGQQIARRPVEVRRLKMVKPDSGCHIVYLAA
CHHCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCHHHHHEEEECCCCCCEEEEEEC
SEAQRSAQIIEALRGSSVLTVSDGRSPGAVTGIINFVIKDDRVRFDIDDEAAAQNRLAIS
CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHEEEECCEEEEECCCHHHHHHHHHHH
SKLLSVALSVKPRRVGEGR
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA