| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is katE [H]
Identifier: 91788318
GI number: 91788318
Start: 2557844
End: 2560018
Strand: Reverse
Name: katE [H]
Synonym: Bpro_2453
Alternate gene names: 91788318
Gene position: 2560018-2557844 (Counterclockwise)
Preceding gene: 91788319
Following gene: 91788314
Centisome position: 49.23
GC content: 59.22
Gene sequence:
>2175_bases ATGCCGCGACCCAAGCGCAAAGCTGCTGGCCCCACCCGGCCAGCGGACGGCGCCAGAGACAAGCAAACCCAGCTTGATGC CTTTACTGCCGGCTCAGCCAATGTCTTGACCACCAACCAGGGTCTACAGATTCCGGACAATCACAACTCCCTGAAGGGTG GTGTTCGCGGCCCTACCCTGCTGGAAGATTTCATCCTCCGCGAAAAAATCACGCATTTTGATCACGAGCGCATTCCGGAA CGTGTCGTACACGCCCGGGGTTCAGGCGCACACGGCTATTTCAAGCCCTACAAGTCGATGGTGCAGTACACCAGCGCCGC CTTTTTGCAGGACCCTGCCATTGAAACGCCTGTATTTGTGAGGTTTTCAACCGTGGCCGGCTCCCGGGGTTCGGCAGACA CGGTGCGGGATGTGCGGGGGTTCGCGGTCAAGTTTTACACCGCCGAAGGCAACTACGATTTGGTGGGCAACAACATTCCT GTTTTCTTTATCCAGGACGCCATCAAATTTCCCGACCTGATCCATGCGGTCAAACCCGAACCGCACCATGAGATGCCGCA AGCAGCAAGTGCCCATGACACTTTCTGGGATTTCGCGTCGCTGATGCCCGAGTCAACCCACATGTTGATGTGGACGATGT CAGACCGCGCCCTGCCGCGCAGCTTTCGGATGATGGAAGGGTTCGGTGTTCATGCTTTCCGCTTTATCAATGCGCGGGGG GATTCTCATTTCGTCAAGTTTCACTGGAAGCCAAAACTGGGGGTGCATGGCCTGGCTTGGGATGAGGCGCAGAAGATTGC CGGCAAAGACCCCGACTTTCACCGGCGCGACCTGTGGGAAGCGATTGAGAGCGGTCATTTTCCCGAGTGGGAGCTGGGCG TTCAGATCGTGGACGACGGCCAGGAGAGCGAGCTTGGCTTTGACATTCTGGACGCTACCAAACTCATTCCAGAGGAGCAG GTTCCCGTCCAGATCATTGGCAAGCTGGTGCTCAACCGCAATCCGGATAATTTTTTCGCCGAAACCGAACAGGTGGCATT TCATCCAGGCCACCTTGTGCCAGGCATTGATTTTTCAAACGATCCCCTGTTGCAGGGGCGGCTCTTCTCGTACACCGATA CCCAGCTGTCCAGGCTCGGCGGTGCGAACTTCCATGAATTACCCATCAATCGGGCAGTTTGCCCAATGCATAACTTCCAG CGCGACGGGATGCATCGCCAGGCCATCAGCAAGGGACGCGTGGCGTACGAGCCCAATACGCTGGGCAATGGCGCAGAGTA CCGGGTTGATGGCGCGGCGCAAGGCTTCCAGTCTTACCCCGAGCAACTGGAGCCGCCCAAAATCCGGCGGCGCAGCCCCT CGTTTGACGATCATTTCTCGCAGGCTACCCTGTTCTGGAACAGCCAGAGCGTTGCCGAGAAAGACCATATCGTCGCAGCG TTCAGGTTTGAGCTGTCCAAGGTGGATGTGCCGGAAATCCGGCAGCGCATCGTGGACAACCTTGCGCATGTGGACCTGAA ACTTGCCGGCCGGGTTGCTGTGACTTTGGGCATCGCCGCCCCGGACCCCAAAGCCGCTGCGGGCCGGCTAGGCTTTCGGG ATTACCGAATCACCAGCAAGGTCGACGAAGATCCCACATTGCGCATGGTTGGCAGGCCGGGCGGTGGCGTGAAGACCCGC AAGGTGGCCATTCTGGTGGCCAATGGCGTTGAATCCGCCCCTCTCCGTCGCATCCAGCAGGATTTGACGGAAGCCGGCGC CCTGTGCAAGCTGGTTGCCCAGCACCTGGGTACAGTCAGCACCGCCAGCGGCCGCCAGCTGGCAGTCGACCATACCTTTG CCAACATGCCGTCCGTCATGTTTGATGCCGTGCTGATTCCCGGTGGTGCGTCCAGCGCCGCAGCGCTGAGCGGGCTCGGC GAGGCGGTTCACTTTGTGCTGGAGGCTTACAAACACGGCAAGACCATTTGTGCGGTGAACGATGGCGTGCAGTTGCTCGG CACGCTGGGCTTCAGCCAGGGGAAAAATCCCGAGCTGGTAACAGTACCCACAGTCGGTGTCCTGATTGCCGACGGGCGCA AGGTGCTGGATGGACAGGTGTCACAAGACTTCATGGCCGCCATTGCACTGCACCGCCACTGGGACCGCCTCAACATTGAC GCCATTCCGGCCTGA
Upstream 100 bases:
>100_bases TTACCCGACAGCCGTCTCTGCACTGGCCACAAGGAGTGGTCTTCCAACACGCCGAGGCGGGTCTTTTTCCAATTCTCAAG CCCTCAAACAAGGAATCTAC
Downstream 100 bases:
>100_bases CCATGCAGTCATGGATATGCAGGCTCGGTACGTTGCCCGCGTAGCGAACCTCAGGGTCTCAGGGTTGTAGGGTCAACTGG TGCGCGAACCCTGCCGGGTT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPE RVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIP VFFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQ VPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQ RDGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTR KVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLG EAVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID AIPA
Sequences:
>Translated_724_residues MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPE RVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIP VFFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQ VPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQ RDGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTR KVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLG EAVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID AIPA >Mature_723_residues PRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTLLEDFILREKITHFDHERIPER VVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPV FFIQDAIKFPDLIHAVKPEPHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARGD SHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDGQESELGFDILDATKLIPEEQV PVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQR DGMHRQAISKGRVAYEPNTLGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAAF RFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSKVDEDPTLRMVGRPGGGVKTRK VAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVSTASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGE AVHFVLEAYKHGKTICAVNDGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNIDA IPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=444, Percent_Identity=43.9189189189189, Blast_Score=364, Evalue=1e-100, Organism=Escherichia coli, GI48994891, Length=728, Percent_Identity=54.8076923076923, Blast_Score=781, Evalue=0.0, Organism=Caenorhabditis elegans, GI25147792, Length=492, Percent_Identity=42.479674796748, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25151141, Length=502, Percent_Identity=42.4302788844622, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71998444, Length=451, Percent_Identity=42.7937915742794, Blast_Score=364, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=39.2197125256673, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6321525, Length=387, Percent_Identity=40.0516795865633, Blast_Score=282, Evalue=1e-76, Organism=Drosophila melanogaster, GI17981717, Length=496, Percent_Identity=40.3225806451613, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI19920968, Length=420, Percent_Identity=41.9047619047619, Blast_Score=338, Evalue=9e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 79721; Mature: 79590
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTL CCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LEDFILREKITHFDHERIPERVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFV HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE RFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPVFFIQDAIKFPDLIHAVKPE EEEEECCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCC PHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCC DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDG CCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECEEEECCC QESELGFDILDATKLIPEEQVPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSN CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCCC DPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQRDGMHRQAISKGRVAYEPNT CCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHCCCEEECCCC LGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA CCCCCEEEECHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHCEEEE FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSK EEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEEEEEECCCCCCHHHCCCCCEEEEECCC VDEDPTLRMVGRPGGGVKTRKVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVS CCCCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGEAVHFVLEAYKHGKTICAVN CCCCCEEEEECHHHCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC DGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID CCHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCCCC AIPA CCCC >Mature Secondary Structure PRPKRKAAGPTRPADGARDKQTQLDAFTAGSANVLTTNQGLQIPDNHNSLKGGVRGPTL CCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LEDFILREKITHFDHERIPERVVHARGSGAHGYFKPYKSMVQYTSAAFLQDPAIETPVFV HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE RFSTVAGSRGSADTVRDVRGFAVKFYTAEGNYDLVGNNIPVFFIQDAIKFPDLIHAVKPE EEEEECCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHCCCC PHHEMPQAASAHDTFWDFASLMPESTHMLMWTMSDRALPRSFRMMEGFGVHAFRFINARG CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCC DSHFVKFHWKPKLGVHGLAWDEAQKIAGKDPDFHRRDLWEAIESGHFPEWELGVQIVDDG CCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECEEEECCC QESELGFDILDATKLIPEEQVPVQIIGKLVLNRNPDNFFAETEQVAFHPGHLVPGIDFSN CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCCC DPLLQGRLFSYTDTQLSRLGGANFHELPINRAVCPMHNFQRDGMHRQAISKGRVAYEPNT CCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHHHHHHCCCEEECCCC LGNGAEYRVDGAAQGFQSYPEQLEPPKIRRRSPSFDDHFSQATLFWNSQSVAEKDHIVAA CCCCCEEEECHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHCEEEE FRFELSKVDVPEIRQRIVDNLAHVDLKLAGRVAVTLGIAAPDPKAAAGRLGFRDYRITSK EEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEEEEEECCCCCCHHHCCCCCEEEEECCC VDEDPTLRMVGRPGGGVKTRKVAILVANGVESAPLRRIQQDLTEAGALCKLVAQHLGTVS CCCCCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TASGRQLAVDHTFANMPSVMFDAVLIPGGASSAAALSGLGEAVHFVLEAYKHGKTICAVN CCCCCEEEEECHHHCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEC DGVQLLGTLGFSQGKNPELVTVPTVGVLIADGRKVLDGQVSQDFMAAIALHRHWDRLNID CCHHHHHHHCCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCCCCC AIPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA