Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788299

Identifier: 91788299

GI number: 91788299

Start: 2537155

End: 2538855

Strand: Reverse

Name: 91788299

Synonym: Bpro_2434

Alternate gene names: NA

Gene position: 2538855-2537155 (Counterclockwise)

Preceding gene: 91788301

Following gene: 91788298

Centisome position: 48.82

GC content: 58.38

Gene sequence:

>1701_bases
ATGAACACTTTTTCGGTTACCCATGCATGTCGCCGGCTATTCGGTGCTATCGCCGGCGTGCTCATTGCTGTGGCGCTGGG
AATAACGCCGGCGCATGCAGTTCTGAGTGATGGCTTCTTTGAGCTGGACGGTAACACCATCGATCCGTCAGGCGCTAGTC
TGCCGGACGACTGGAACAGCTTTCCTGCCGGTCAGGGACACACGACGCGAATTACCAACCCTGACCTGAGTGGAGGCCCA
TACCTCGGAATCATCAGCGATACCAATCCGGCGGTGTTCCGCGGCGGCTCCAAGGATATACAGGACATTAGCGCCTGGCG
CTATGACTTGGGCTCCTCGCCACCCAAAGACGATATGCTCCACGCCTACGCGGCAGCCTATACCGCCACCACCACCACCG
CCACTACCACGGCCGGCGATCTGCTGATTTACTTCGGCGCTGACCGCGCCAGTTTTAATGGCACGGCGAGCCTGGGCTTC
TGGTTCTTCAAAAATCCGGTGGCAAGGAATGACGCGACAGGAACCTTTATCAACCCCGTCACCAACGGGCCAGCGACGCA
TGCGGAAGGAGATGTACTGCTGGCTTTTGAATACACCAATGGCGGCGCTGTGACCGATGTGCATTGGTATAAGTGGACCG
CAGGTCATCTGCAGGATATGGGAACGATTGGGGTCTCGGCGACCTCCGTTGCCGGGGTGTTCTGCGATGCGGACGACAAG
CTTTGCGGCTCCACCAACGGCGGAGCTTTGACCATTCCCTGGAACGGGGTGATACAGGCGGGGCAGTTCTTCGAAGGCGG
TGTGAATATCCAGAAACTGTTGCCAGGCAGCGACTCCTGCTTTTCTTCGTTCATGGCAACCAGCCGGTCGTCGGATCAGC
CCAATGCATCGATCAAGAACTTTCTCCTGTCGAGCTTCCCGGTGTGCCATTTGACAGTGACGAAGGCGTGCGAGAGCGCT
GCGTACCAATCGGCTACCAATACGATATTGAATACCGTCAGAGGCAGTATCGTGAATGATGGCGGCGGCCCCCTGACGAA
CGTCACGCTGACCGACAACCCCACGTTCGATGCAGGCACCTTTGGATTCTTCACCTGCGACGCCAATGGTTTGCCGACCG
CAACACCCCAGGATCCCGCCACGCTGGCATCCGGTGCTTCGATATGCTACCGGGGAAAATACACTTCCAATACCCTGTCA
ACACTTGACACGGTGACCGCAAGTGCATCGACTGGTTCTGGCTCGGTGTCGGGCACGGCAAGTGCCACTTGCACCGCAAC
GCCTCCCAACGCAGGCCTGTCCGTGACGAAGATCTGCGACGTGGATCTGGAGCTTGTGAGCGGCAAGCTGGCGCTGAAGG
TCAACTACAGTGGCTCAGTGACCAATAGCGGCGGCCTTGCCTTGACCGGGGTGGAGGTTTGCGAGGCTCATGAGCAGACC
TACACAGGGACTCAAACGCCGTGCGATGTTACCCACACCACGATTTCCATCGGCAACCTGGCTGCAAGTGCGTCGGCCCC
TTACAGTGGGTCTTACTACCCAACGCAGGCATTGACAGCGGGAGGCCTGTCGACACTGGCCGATCCGGAACTGTCCCTGT
TCAAGGACCAGGTTATGGCCCGTGGAACCAAGCCGGCAATTGTTGGCGGAGGCATAGAAAACTCACTGCCAAACGAGGCC
ACATGCCCGCTGTGCAAGTAA

Upstream 100 bases:

>100_bases
ACATTCCATTGATGCAGGAAGTTTTTTGAGTCCTGTATTGCCCGGGCGCAATGCCAGGCTGGGGATCGTAACTTTACTAA
CTCTAGCAAGGGGGAAGGTC

Downstream 100 bases:

>100_bases
TTTCATAGCGACTTGGCATTGACCCAAACCAACCGGGGATGGCGACTGAAGTCGTCATCCCCATTTGGTCAACTTGTTAA
ACGCATTGCATTGAAGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MNTFSVTHACRRLFGAIAGVLIAVALGITPAHAVLSDGFFELDGNTIDPSGASLPDDWNSFPAGQGHTTRITNPDLSGGP
YLGIISDTNPAVFRGGSKDIQDISAWRYDLGSSPPKDDMLHAYAAAYTATTTTATTTAGDLLIYFGADRASFNGTASLGF
WFFKNPVARNDATGTFINPVTNGPATHAEGDVLLAFEYTNGGAVTDVHWYKWTAGHLQDMGTIGVSATSVAGVFCDADDK
LCGSTNGGALTIPWNGVIQAGQFFEGGVNIQKLLPGSDSCFSSFMATSRSSDQPNASIKNFLLSSFPVCHLTVTKACESA
AYQSATNTILNTVRGSIVNDGGGPLTNVTLTDNPTFDAGTFGFFTCDANGLPTATPQDPATLASGASICYRGKYTSNTLS
TLDTVTASASTGSGSVSGTASATCTATPPNAGLSVTKICDVDLELVSGKLALKVNYSGSVTNSGGLALTGVEVCEAHEQT
YTGTQTPCDVTHTTISIGNLAASASAPYSGSYYPTQALTAGGLSTLADPELSLFKDQVMARGTKPAIVGGGIENSLPNEA
TCPLCK

Sequences:

>Translated_566_residues
MNTFSVTHACRRLFGAIAGVLIAVALGITPAHAVLSDGFFELDGNTIDPSGASLPDDWNSFPAGQGHTTRITNPDLSGGP
YLGIISDTNPAVFRGGSKDIQDISAWRYDLGSSPPKDDMLHAYAAAYTATTTTATTTAGDLLIYFGADRASFNGTASLGF
WFFKNPVARNDATGTFINPVTNGPATHAEGDVLLAFEYTNGGAVTDVHWYKWTAGHLQDMGTIGVSATSVAGVFCDADDK
LCGSTNGGALTIPWNGVIQAGQFFEGGVNIQKLLPGSDSCFSSFMATSRSSDQPNASIKNFLLSSFPVCHLTVTKACESA
AYQSATNTILNTVRGSIVNDGGGPLTNVTLTDNPTFDAGTFGFFTCDANGLPTATPQDPATLASGASICYRGKYTSNTLS
TLDTVTASASTGSGSVSGTASATCTATPPNAGLSVTKICDVDLELVSGKLALKVNYSGSVTNSGGLALTGVEVCEAHEQT
YTGTQTPCDVTHTTISIGNLAASASAPYSGSYYPTQALTAGGLSTLADPELSLFKDQVMARGTKPAIVGGGIENSLPNEA
TCPLCK
>Mature_566_residues
MNTFSVTHACRRLFGAIAGVLIAVALGITPAHAVLSDGFFELDGNTIDPSGASLPDDWNSFPAGQGHTTRITNPDLSGGP
YLGIISDTNPAVFRGGSKDIQDISAWRYDLGSSPPKDDMLHAYAAAYTATTTTATTTAGDLLIYFGADRASFNGTASLGF
WFFKNPVARNDATGTFINPVTNGPATHAEGDVLLAFEYTNGGAVTDVHWYKWTAGHLQDMGTIGVSATSVAGVFCDADDK
LCGSTNGGALTIPWNGVIQAGQFFEGGVNIQKLLPGSDSCFSSFMATSRSSDQPNASIKNFLLSSFPVCHLTVTKACESA
AYQSATNTILNTVRGSIVNDGGGPLTNVTLTDNPTFDAGTFGFFTCDANGLPTATPQDPATLASGASICYRGKYTSNTLS
TLDTVTASASTGSGSVSGTASATCTATPPNAGLSVTKICDVDLELVSGKLALKVNYSGSVTNSGGLALTGVEVCEAHEQT
YTGTQTPCDVTHTTISIGNLAASASAPYSGSYYPTQALTAGGLSTLADPELSLFKDQVMARGTKPAIVGGGIENSLPNEA
TCPLCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58195; Mature: 58195

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFSVTHACRRLFGAIAGVLIAVALGITPAHAVLSDGFFELDGNTIDPSGASLPDDWNS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCEECCCCCCCCCCCCC
FPAGQGHTTRITNPDLSGGPYLGIISDTNPAVFRGGSKDIQDISAWRYDLGSSPPKDDML
CCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCHHHHH
HAYAAAYTATTTTATTTAGDLLIYFGADRASFNGTASLGFWFFKNPVARNDATGTFINPV
HHHHHHHEECCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECCC
TNGPATHAEGDVLLAFEYTNGGAVTDVHWYKWTAGHLQDMGTIGVSATSVAGVFCDADDK
CCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHCCCCCCCHHHEEEEEECCCCC
LCGSTNGGALTIPWNGVIQAGQFFEGGVNIQKLLPGSDSCFSSFMATSRSSDQPNASIKN
CCCCCCCCEEEECCCCEEECCCEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
FLLSSFPVCHLTVTKACESAAYQSATNTILNTVRGSIVNDGGGPLTNVTLTDNPTFDAGT
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCC
FGFFTCDANGLPTATPQDPATLASGASICYRGKYTSNTLSTLDTVTASASTGSGSVSGTA
EEEEEECCCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHEECCCCCCCCCCCCC
SATCTATPPNAGLSVTKICDVDLELVSGKLALKVNYSGSVTNSGGLALTGVEVCEAHEQT
CEEEEECCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHC
YTGTQTPCDVTHTTISIGNLAASASAPYSGSYYPTQALTAGGLSTLADPELSLFKDQVMA
CCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHH
RGTKPAIVGGGIENSLPNEATCPLCK
CCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTFSVTHACRRLFGAIAGVLIAVALGITPAHAVLSDGFFELDGNTIDPSGASLPDDWNS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCEECCCCCCCCCCCCC
FPAGQGHTTRITNPDLSGGPYLGIISDTNPAVFRGGSKDIQDISAWRYDLGSSPPKDDML
CCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCHHHHH
HAYAAAYTATTTTATTTAGDLLIYFGADRASFNGTASLGFWFFKNPVARNDATGTFINPV
HHHHHHHEECCCEEEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECCC
TNGPATHAEGDVLLAFEYTNGGAVTDVHWYKWTAGHLQDMGTIGVSATSVAGVFCDADDK
CCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHCCCCCCCHHHEEEEEECCCCC
LCGSTNGGALTIPWNGVIQAGQFFEGGVNIQKLLPGSDSCFSSFMATSRSSDQPNASIKN
CCCCCCCCEEEECCCCEEECCCEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
FLLSSFPVCHLTVTKACESAAYQSATNTILNTVRGSIVNDGGGPLTNVTLTDNPTFDAGT
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCC
FGFFTCDANGLPTATPQDPATLASGASICYRGKYTSNTLSTLDTVTASASTGSGSVSGTA
EEEEEECCCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHEECCCCCCCCCCCCC
SATCTATPPNAGLSVTKICDVDLELVSGKLALKVNYSGSVTNSGGLALTGVEVCEAHEQT
CEEEEECCCCCCEEEEEEECCCEEEECCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHC
YTGTQTPCDVTHTTISIGNLAASASAPYSGSYYPTQALTAGGLSTLADPELSLFKDQVMA
CCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHH
RGTKPAIVGGGIENSLPNEATCPLCK
CCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA