| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788277
Identifier: 91788277
GI number: 91788277
Start: 2510631
End: 2511005
Strand: Reverse
Name: 91788277
Synonym: Bpro_2412
Alternate gene names: NA
Gene position: 2511005-2510631 (Counterclockwise)
Preceding gene: 91788278
Following gene: 91788272
Centisome position: 48.29
GC content: 61.87
Gene sequence:
>375_bases ATGAGTGCAAAAAATGTTTTGGGCGGTGAGCTGGTCCCCTGCTCTTACGATCCGCTCACGGGCTACTTCCGGGACGGTTG CTGCAACAGCGATGCGTCCGATCTAGGCTCCCATCTGGTCTGCGTGCGGGTCACCCCGGAGTTTCTCGCGTTCTCCAGTG CGCGCGGCAATGACCTCGTCACGCCGCGGCCGCAGTACCGTTTTGCCGGACTCAAACCAGGCGACCGCTGGTGCCTGTGC GCCCAGCGCTGGCGGGAGGCCCTGGAGGCAGGCATGGCACCACCGGTGATTCTGGAAGCCACCCACACCAACGTGCTGGA ATTTGTCACACTGGCGCAACTGGAAAAGCACCGGTTTCAGGGCGCTGTTCATTAA
Upstream 100 bases:
>100_bases GTGCCAAGCAACATGACCGAGGTGTCTGCACTGATCGCATCGGCCATGAAGATGGTGCAGTCCAGCAGGGCATGATCAAT ACTTCACTACAGGTACAGCC
Downstream 100 bases:
>100_bases GCGCAGCTTTAAGAGCCGCCACATTCTGACAAGTCCTCTGGCACTGCTACAATCAAAGGCTTCGCGGAAAGGTGGATGAG CGGTTTAAGTCACACGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSAKNVLGGELVPCSYDPLTGYFRDGCCNSDASDLGSHLVCVRVTPEFLAFSSARGNDLVTPRPQYRFAGLKPGDRWCLC AQRWREALEAGMAPPVILEATHTNVLEFVTLAQLEKHRFQGAVH
Sequences:
>Translated_124_residues MSAKNVLGGELVPCSYDPLTGYFRDGCCNSDASDLGSHLVCVRVTPEFLAFSSARGNDLVTPRPQYRFAGLKPGDRWCLC AQRWREALEAGMAPPVILEATHTNVLEFVTLAQLEKHRFQGAVH >Mature_123_residues SAKNVLGGELVPCSYDPLTGYFRDGCCNSDASDLGSHLVCVRVTPEFLAFSSARGNDLVTPRPQYRFAGLKPGDRWCLCA QRWREALEAGMAPPVILEATHTNVLEFVTLAQLEKHRFQGAVH
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13652; Mature: 13520
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKNVLGGELVPCSYDPLTGYFRDGCCNSDASDLGSHLVCVRVTPEFLAFSSARGNDLV CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCEEEEEEECHHHHHCCCCCCCCCC TPRPQYRFAGLKPGDRWCLCAQRWREALEAGMAPPVILEATHTNVLEFVTLAQLEKHRFQ CCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHC GAVH CCCC >Mature Secondary Structure SAKNVLGGELVPCSYDPLTGYFRDGCCNSDASDLGSHLVCVRVTPEFLAFSSARGNDLV CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCEEEEEEECHHHHHCCCCCCCCCC TPRPQYRFAGLKPGDRWCLCAQRWREALEAGMAPPVILEATHTNVLEFVTLAQLEKHRFQ CCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHC GAVH CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA