| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ssuA [H]
Identifier: 91788267
GI number: 91788267
Start: 2499981
End: 2501024
Strand: Reverse
Name: ssuA [H]
Synonym: Bpro_2402
Alternate gene names: 91788267
Gene position: 2501024-2499981 (Counterclockwise)
Preceding gene: 91788268
Following gene: 91788266
Centisome position: 48.09
GC content: 56.51
Gene sequence:
>1044_bases ATGACAAGAAAGTCGGAGAGACACTTCAGCGGCAAAACCTCCCTGCCCGCGGTCGCGGGCTTGCTCATTGCGGTAGCGTT ACTGGCCGGAGGCTATGGATGGATGACCCGCACGTCGCCAGCATCTCAGGCAGAACCGCCGGAACAGGTAACCATCGCGA CAAATACCGCCTATGTTGGAAGCTGTCCGGTCATCGTGGCTCGAGAAAAAGGTTATTTCGCGAGCGAGGGAATACTTGCC GTTGTTCAACCTCACTCTAGCGGCAAGGCTGCCATGGAAGCGGTCTTGCAAGGACAGGCCAATTTGGCGACCGTTGCCGA CATTCCTGTCATGTTCGCCGGCATGAACGATCAGCCTGTATCTGTCATCGCAACAATATTCAAGGCGGAGAAAGATCATG GAATTGTCGGGCGAAGGGACAGGGGTGTCGTGACGCCCGGGAACCTCAAGGGAAAACGCATAGGCGTTACGCTGAGCACT TCAGGGCACTTCACTCTCCATGCTTTCCTCAGCCGGCACAGGTTGTCGTCAGATGGAGTGACGGTGCGCAACTATAAGCC GGAGGATCTTCCCACAGCGCTCGCGCAAGGCGATGTTGACGCCATTGCGACGTGGGAACCGTTTCTGGATACGTCGTTGA CGGTGCTCGGCGGCAACGGCGTGATTCACTACAGTCAGGGCATTTACGAAAGCCTGTACAACGTTGCCGGAATGCGGACC TATGTCGTCAGCCAGCCGGAGACCATCAAGAAAGTCCTGCGCGCGTTGGTCAAGGGTGCGCGATTTTGCAGCGACGCGCC CGATGCGGCACGCGAACTGATTGCCGCGGGTATGCTGGATGCGACGAAGTTGAAAGCGTCGTGGCCGTCGTACCGGTTCA ACATGGCCCTGGACCAGGGCTTGATACTGGCCCTGGAGGACGAGGCACGGTGGGCAATCAGGAACAAGCTGACAAGCAGG ACTGAAATGCCGAATTATCTCAATTACATTTACCTTGATGGCTTGAAGGCAGTGATGCCATCAGCGGTGACGATTATTCA TTGA
Upstream 100 bases:
>100_bases CCAGTTCCTTGAGTTTCGGCAACTTTGTCCTCCTGTAGTGCTTGCTGCGGTACCCTTGTTCACGACAGCGAGCACTCTGA CGGCTTGAAGGAGATTCACG
Downstream 100 bases:
>100_bases AGCGACTCGCTTGCGCGTCCGGGTTGAGTTTCGAGTCAAGCACCTTTTGGAGTCGTGACTTCGGTCCATGTGGCCCTCAC AACGCCAACCTGGCGATCAC
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTRKSERHFSGKTSLPAVAGLLIAVALLAGGYGWMTRTSPASQAEPPEQVTIATNTAYVGSCPVIVAREKGYFASEGILA VVQPHSSGKAAMEAVLQGQANLATVADIPVMFAGMNDQPVSVIATIFKAEKDHGIVGRRDRGVVTPGNLKGKRIGVTLST SGHFTLHAFLSRHRLSSDGVTVRNYKPEDLPTALAQGDVDAIATWEPFLDTSLTVLGGNGVIHYSQGIYESLYNVAGMRT YVVSQPETIKKVLRALVKGARFCSDAPDAARELIAAGMLDATKLKASWPSYRFNMALDQGLILALEDEARWAIRNKLTSR TEMPNYLNYIYLDGLKAVMPSAVTIIH
Sequences:
>Translated_347_residues MTRKSERHFSGKTSLPAVAGLLIAVALLAGGYGWMTRTSPASQAEPPEQVTIATNTAYVGSCPVIVAREKGYFASEGILA VVQPHSSGKAAMEAVLQGQANLATVADIPVMFAGMNDQPVSVIATIFKAEKDHGIVGRRDRGVVTPGNLKGKRIGVTLST SGHFTLHAFLSRHRLSSDGVTVRNYKPEDLPTALAQGDVDAIATWEPFLDTSLTVLGGNGVIHYSQGIYESLYNVAGMRT YVVSQPETIKKVLRALVKGARFCSDAPDAARELIAAGMLDATKLKASWPSYRFNMALDQGLILALEDEARWAIRNKLTSR TEMPNYLNYIYLDGLKAVMPSAVTIIH >Mature_346_residues TRKSERHFSGKTSLPAVAGLLIAVALLAGGYGWMTRTSPASQAEPPEQVTIATNTAYVGSCPVIVAREKGYFASEGILAV VQPHSSGKAAMEAVLQGQANLATVADIPVMFAGMNDQPVSVIATIFKAEKDHGIVGRRDRGVVTPGNLKGKRIGVTLSTS GHFTLHAFLSRHRLSSDGVTVRNYKPEDLPTALAQGDVDAIATWEPFLDTSLTVLGGNGVIHYSQGIYESLYNVAGMRTY VVSQPETIKKVLRALVKGARFCSDAPDAARELIAAGMLDATKLKASWPSYRFNMALDQGLILALEDEARWAIRNKLTSRT EMPNYLNYIYLDGLKAVMPSAVTIIH
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 37332; Mature: 37201
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKSERHFSGKTSLPAVAGLLIAVALLAGGYGWMTRTSPASQAEPPEQVTIATNTAYVG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEC SCPVIVAREKGYFASEGILAVVQPHSSGKAAMEAVLQGQANLATVADIPVMFAGMNDQPV CCCEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCEEEECCCCCHH SVIATIFKAEKDHGIVGRRDRGVVTPGNLKGKRIGVTLSTSGHFTLHAFLSRHRLSSDGV HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCE TVRNYKPEDLPTALAQGDVDAIATWEPFLDTSLTVLGGNGVIHYSQGIYESLYNVAGMRT EEECCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEECHHHHHHHHHHCCCEE YVVSQPETIKKVLRALVKGARFCSDAPDAARELIAAGMLDATKLKASWPSYRFNMALDQG EEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCC LILALEDEARWAIRNKLTSRTEMPNYLNYIYLDGLKAVMPSAVTIIH EEEEEECCHHHHHHHHHHHHHCCCCHHCEEEECCHHHHCCCEEEEEC >Mature Secondary Structure TRKSERHFSGKTSLPAVAGLLIAVALLAGGYGWMTRTSPASQAEPPEQVTIATNTAYVG CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEC SCPVIVAREKGYFASEGILAVVQPHSSGKAAMEAVLQGQANLATVADIPVMFAGMNDQPV CCCEEEEECCCCEECCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCEEEECCCCCHH SVIATIFKAEKDHGIVGRRDRGVVTPGNLKGKRIGVTLSTSGHFTLHAFLSRHRLSSDGV HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCE TVRNYKPEDLPTALAQGDVDAIATWEPFLDTSLTVLGGNGVIHYSQGIYESLYNVAGMRT EEECCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEECHHHHHHHHHHCCCEE YVVSQPETIKKVLRALVKGARFCSDAPDAARELIAAGMLDATKLKASWPSYRFNMALDQG EEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCC LILALEDEARWAIRNKLTSRTEMPNYLNYIYLDGLKAVMPSAVTIIH EEEEEECCHHHHHHHHHHHHHCCCCHHCEEEECCHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]