Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788262

Identifier: 91788262

GI number: 91788262

Start: 2490355

End: 2491962

Strand: Reverse

Name: 91788262

Synonym: Bpro_2396

Alternate gene names: NA

Gene position: 2491962-2490355 (Counterclockwise)

Preceding gene: 161936269

Following gene: 91788261

Centisome position: 47.92

GC content: 63.99

Gene sequence:

>1608_bases
ATGAAGCGGCATATCCGTGACAGCTATTACATCGTCGGCGAAGGAACGGTGCATTGCGATCCTAAAGGGAAACCCGTCAC
CGACCCCAAGCCCGGCGACGTGCCCGAGATGCGCAAGTTCCGCTTTTCGCGCATGGGGCCCAAGGGCGCGGTCGTTAACC
GGACGATTGTCGAAGGACTCGCACAAGCCATGACCGCCGAAGATGGCGGCGACTCGGCTGGTCCCGCCATCCCGGCGGGC
TTCACCTATCTGGGGCAGTTCATCGACCACGACCTGACCATGGACAAGACCGCCGCCGCCTTGGGCGAAAACGTCACCAT
CAACCAGTTGCTGCAGGGCCGCTCGCCGGCGCTGGATCTGGACTGCATGTACGGGCGAGGCCCCGATGACGCGGACGACG
CCAGGTTCTATAGCGACGGCATCCGCATCAAGATGGGAACCACCGCGCCCACGCCATTTCCGGACGGCGGAACCAATGTT
CCGCGCGACGGGTTCGATCTGCCGCGCGTGGGACAGGGGTCGACCAAACTGGCGCGCCGCGCCGCGCTGATCCCCGATCA
CCGCAACGATGAAAACCTGGTCGTCGCGCAAACCCACCTGGCCATGATCCGCTTTCACAACCGCGTGGTGAACCACATTG
CGCCGACCACGCCGAGCGCCGACCTGTTCAAGCGCGCGCGCGAGCTGGTCGTCAAGCACTACCAATGGATGATCAAGACC
GATTTTCTGCCGCGAATCGTGGACCCGGCCATCGTGCAGGACGTGTTCACCAATGGCCGCAAGTTCTTCGAAAAGGATGC
GACGCCCGAGCATATGCCGACGATGCCGATCGAGTTCTCGGTGGCCGCCTACCGGCTCGGCCACAGCATGATCCGTGGCG
CGTACCAGTGGAACCGCGTTTTCAAGTCGGGCGGGCCGGGGCCGATTGCCTCGCTGGAACTGCTGTTCACCTTCTCTGGC
ACAAGCGGCATCCTGTCGCCCGATGGCAACCTGAACGACCGCGAATCGGGCAGCTTCGAAAGGTTGCCGACCAACTGGAT
CGCTGATTTCCGTCGCCTGTACAACTTCAACGAGGTGGGCCGTGCCGATCTCACGCCGCCCGAAGGCGCGCCCAACGTCA
CCAAGAAGATCGACACCCAGCTGGTGGATCCGCTCAAGACGTTGCCGTTCGGTTCGCTCGGCGGCTCGGCCGCGACACCC
GCGATCGAGCTGAACCTGGCGTTTCGTAACCTGCAGCGCGCCAATATGGTCGAGCTGGCCAGCGGCCAGCAGATGGCCGC
GCTCCTGGAGGTGGCGCCGCTAACCTCGGCGCAGCTGAGCAAGGGCTTGCCGGTGGCCCTCAAGGACGCCGCCACCAACA
CCCCGTTGTGGTACTACATCCTGCGCGAGGCCGAGCTAAACAATGGCCGCCTGACCGGTGTCGGCGGCAGGATCGCGGCC
GAAACCTTCCATCGAGCCATGGAGGGCAGCGAGCACTCAATCGTGCGCGACCCCGCTTTCCGGCCCACGGCGCTGGTTAC
AAACCCGGGCGACCGGTTCAACATGACGGACTTGCTGCTTTTCGCCTTTGAAGGCCGGGCAGACCTGCTCAATCCCCTTG
GCGACTGA

Upstream 100 bases:

>100_bases
CTTACCAGGAATTGCGCACCCCCTCATCCATTCGGATGATGACAGATAACGTGCTGCGGCTTACCTTTGCGCCTCATGGG
TTAACACCAGGAGGAACATC

Downstream 100 bases:

>100_bases
GCTGCGACTGAACTGCCTTACCCTCGACCAGTGCCTGCGCGCGCCGCGCAGGCACCGCGTTGCCATCGCCCCGAGGCGTT
GCCATGCTACTGACTTTTGG

Product: heme peroxidase

Products: NA

Alternate protein names: Animal Heme Peroxidase; Peroxidase Family Protein; Myeloperoxidase Thyroid Peroxidase-Like Protein; Animal Haem Peroxidase Superfamily; Ovoperoxidase; Peroxidase

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG
FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV
PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT
DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG
TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP
AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA
ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD

Sequences:

>Translated_535_residues
MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG
FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV
PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT
DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG
TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP
AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA
ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD
>Mature_535_residues
MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG
FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV
PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT
DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG
TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP
AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA
ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58566; Mature: 58566

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50292 PEROXIDASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGL
CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AQAMTAEDGGDSAGPAIPAGFTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEE
DCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNVPRDGFDLPRVGQGSTKLARR
EEECCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRV
CCHHHHHCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
FKSGGPGPIASLELLFTFSGTSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVG
HHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
RADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATPAIELNLAFRNLQRANMVELA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHC
SGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA
CCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCEEECCCCHHHH
ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD
HHHHHHHCCCCCCEECCCCCCCEEEEECCCCCCCHHHEEEEEECCCHHHHHCCCC
>Mature Secondary Structure
MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGL
CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AQAMTAEDGGDSAGPAIPAGFTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDL
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEE
DCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNVPRDGFDLPRVGQGSTKLARR
EEECCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT
HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRV
CCHHHHHCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
FKSGGPGPIASLELLFTFSGTSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVG
HHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
RADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATPAIELNLAFRNLQRANMVELA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHC
SGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA
CCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCEEECCCCHHHH
ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD
HHHHHHHCCCCCCEECCCCCCCEEEEECCCCCCCHHHEEEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA