| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is merA [H]
Identifier: 91788100
GI number: 91788100
Start: 2318937
End: 2320622
Strand: Reverse
Name: merA [H]
Synonym: Bpro_2228
Alternate gene names: 91788100
Gene position: 2320622-2318937 (Counterclockwise)
Preceding gene: 91788101
Following gene: 91788099
Centisome position: 44.63
GC content: 63.64
Gene sequence:
>1686_bases ATGACCGACTTGAAGATCACCGGAATGACCTGCGACTCGTGCGCTGCGCATGTCAAGGAAGCCTTGGAGAAGGTGCCGGG TGTGTTTTCTGCGGTCGTGTCCTACGCGAAGGGCACTGCGCAGCTCGCCACCGAGCTAGGCACGTCGCCGGATGCGCTGA CTGCCGCCGTTGCCGGACTCGGCTACAAGGCCACGCTCGCGGATGCACCGACAGCCGAGAAGCGCGGCGGTCTGCTTGAT AAAGCGCGTGGATGGCTGAGTGGTGGCGACAAATCAGTCGGCGATGGAGGCAAACTGCATATTGCCGTCATCGGTAGCGG CGGCGCTGCGATGGCGGCGGCGCTAAAGGCCGCCGAGCAAGGCGCGAAGGTCACGCTGATCGAGCGCGGCACCATCGGCG GCACTTGCGTCAATGTCGGTTGCGTGCCGTCCAAGATCATGATCCGCGCCGCCCATATCGCCCATCTGCGCCGTGAAAGT CCATTCGACGACGGTATCGAGGCGACTGTGCCTGCGATTGACCGCCGCGAACTGCTGGCGCAGCAGCAGGCTCGCGTCGA TGAACTGCGCCACGCCAAGTACGAGGGCATTCTGGACAGCAACCCGGCCATCAATGTGCTGCAGGGTGAAGCGCGTTTCA AAGACGGCCAAAGCCTTGCCGTCGGTTTGAACGATGGCGGCGAGCGCGCGGTGGTGTTCGACCGCTGCCTGGTCGCCACC GGCGCCAGCGCGGCAGTCCCGCCGATTCCCGGCCTGAAAGACACACCTTACTGGACCTCCATCGAGGCGCTGGTCAGCGA CACGATTCCTCAGCGGCTGGCTGTGATCGGCTCGTCGGTGGTCGCGGTGGAGCTGGCACAAGCCTTTGCCCGACTGGGCA GCCAGGTCACTATCCTGGCGCGCAGCACGCTGTTCTTCCGCGAAGACCCGGCTATCGGCGAGGCCGTCACAGCCGCCTTC CGTGCGGAAGGGATCAAGGTGCTGGAACACACGCAAGCCAGCCACGTCGCTTATGCGGACGGTGAATTCCTGCTTACCAC GGGACACGGCGAAGTACGTGCCGACAAGCTATTGGTCGCCACCGGCCGGGCGCCGAACACGCACAGCCTGGCACTGGAAG CGGCGGGCGTCACCGTTAATGCGCAGGGTGCCATCGTCATCGACAAGTTCATGCGCACAAGTACCCCGCACGTCTACGCT GCCGGCGACTGCACCGACCAACCGCAGTTCGTCTATGTGGCAGCGGCGGCCGGCACCCGTGCAGCGATCAACATGACCGG TGGCGAAGCTGCCATTGATCTAAGCGTTATGCCGGCAGTGGTGTTCACCGACCCGCAAGTCGCCACCGTGGGCTACAGCG AAGCGCAAGGGCACCATGACGGCATCGAGACGGACAGCCGGCTGCTCACGTTGGATAACGTACCACGTGCGCTCGCCAAC TTCGATACGCGCGGCTTTATCAAGCTGGTTATTGAGGAAGGTAGCGGACGACTCATCGGCGTACAGGCGGTGGCCCCGGA AGCGGGCGAGCTGATCCAGACGGCGGTGCTCGCCATACGTAACCGCATGACGGTGCAAGAACTGGCTGACCAGTTGTTCC CATACTTGACGATGGTCGAGGGGCTGAAGCTCGCGGCACAGACCTTCAGCAAGGACGTAACGCAGCTTTCCTGCTGCGCC GGATGA
Upstream 100 bases:
>100_bases TCGCCAGCGAAGCGCCGCGGCGGACCGGACGGCTGCGCACTGCCGCCCCGGCGTGGCTGACGGCATTGGCCGTTGCCGAA ACAGAAAAAGGAACTATTGC
Downstream 100 bases:
>100_bases AGAAAAGAAGGTGTTCGATGAACGCCTGCACGGTGTCCCATCTGGCCCTGGATGCCGGTGTGAGTGTGCATGTCGTGCGC GACTACATGCTGCGTGGGTT
Product: putative mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MTDLKITGMTCDSCAAHVKEALEKVPGVFSAVVSYAKGTAQLATELGTSPDALTAAVAGLGYKATLADAPTAEKRGGLLD KARGWLSGGDKSVGDGGKLHIAVIGSGGAAMAAALKAAEQGAKVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRES PFDDGIEATVPAIDRRELLAQQQARVDELRHAKYEGILDSNPAINVLQGEARFKDGQSLAVGLNDGGERAVVFDRCLVAT GASAAVPPIPGLKDTPYWTSIEALVSDTIPQRLAVIGSSVVAVELAQAFARLGSQVTILARSTLFFREDPAIGEAVTAAF RAEGIKVLEHTQASHVAYADGEFLLTTGHGEVRADKLLVATGRAPNTHSLALEAAGVTVNAQGAIVIDKFMRTSTPHVYA AGDCTDQPQFVYVAAAAGTRAAINMTGGEAAIDLSVMPAVVFTDPQVATVGYSEAQGHHDGIETDSRLLTLDNVPRALAN FDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVTQLSCCA G
Sequences:
>Translated_561_residues MTDLKITGMTCDSCAAHVKEALEKVPGVFSAVVSYAKGTAQLATELGTSPDALTAAVAGLGYKATLADAPTAEKRGGLLD KARGWLSGGDKSVGDGGKLHIAVIGSGGAAMAAALKAAEQGAKVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRES PFDDGIEATVPAIDRRELLAQQQARVDELRHAKYEGILDSNPAINVLQGEARFKDGQSLAVGLNDGGERAVVFDRCLVAT GASAAVPPIPGLKDTPYWTSIEALVSDTIPQRLAVIGSSVVAVELAQAFARLGSQVTILARSTLFFREDPAIGEAVTAAF RAEGIKVLEHTQASHVAYADGEFLLTTGHGEVRADKLLVATGRAPNTHSLALEAAGVTVNAQGAIVIDKFMRTSTPHVYA AGDCTDQPQFVYVAAAAGTRAAINMTGGEAAIDLSVMPAVVFTDPQVATVGYSEAQGHHDGIETDSRLLTLDNVPRALAN FDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVTQLSCCA G >Mature_560_residues TDLKITGMTCDSCAAHVKEALEKVPGVFSAVVSYAKGTAQLATELGTSPDALTAAVAGLGYKATLADAPTAEKRGGLLDK ARGWLSGGDKSVGDGGKLHIAVIGSGGAAMAAALKAAEQGAKVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESP FDDGIEATVPAIDRRELLAQQQARVDELRHAKYEGILDSNPAINVLQGEARFKDGQSLAVGLNDGGERAVVFDRCLVATG ASAAVPPIPGLKDTPYWTSIEALVSDTIPQRLAVIGSSVVAVELAQAFARLGSQVTILARSTLFFREDPAIGEAVTAAFR AEGIKVLEHTQASHVAYADGEFLLTTGHGEVRADKLLVATGRAPNTHSLALEAAGVTVNAQGAIVIDKFMRTSTPHVYAA GDCTDQPQFVYVAAAAGTRAAINMTGGEAAIDLSVMPAVVFTDPQVATVGYSEAQGHHDGIETDSRLLTLDNVPRALANF DTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVTQLSCCAG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=474, Percent_Identity=30.168776371308, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI50301238, Length=445, Percent_Identity=27.6404494382022, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI22035672, Length=445, Percent_Identity=28.5393258426966, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI148277065, Length=444, Percent_Identity=26.1261261261261, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI148277071, Length=444, Percent_Identity=26.3513513513513, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI33519430, Length=444, Percent_Identity=26.3513513513513, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI33519428, Length=444, Percent_Identity=26.3513513513513, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI33519426, Length=444, Percent_Identity=26.3513513513513, Blast_Score=110, Evalue=5e-24, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=30.4635761589404, Blast_Score=209, Evalue=4e-55, Organism=Escherichia coli, GI1786307, Length=470, Percent_Identity=28.936170212766, Blast_Score=193, Evalue=3e-50, Organism=Escherichia coli, GI1789915, Length=417, Percent_Identity=32.6139088729017, Blast_Score=185, Evalue=7e-48, Organism=Escherichia coli, GI87082354, Length=456, Percent_Identity=25.219298245614, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1789065, Length=183, Percent_Identity=29.5081967213115, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI32565766, Length=461, Percent_Identity=27.5488069414317, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71983419, Length=353, Percent_Identity=32.2946175637394, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71983429, Length=353, Percent_Identity=32.0113314447592, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17557007, Length=463, Percent_Identity=28.2937365010799, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17559934, Length=257, Percent_Identity=25.2918287937743, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6321091, Length=465, Percent_Identity=29.0322580645161, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6325166, Length=373, Percent_Identity=28.686327077748, Blast_Score=138, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6325240, Length=475, Percent_Identity=25.4736842105263, Blast_Score=120, Evalue=6e-28, Organism=Drosophila melanogaster, GI21358499, Length=483, Percent_Identity=30.6418219461698, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI17737741, Length=494, Percent_Identity=28.1376518218623, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24640553, Length=490, Percent_Identity=28.3673469387755, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24640551, Length=490, Percent_Identity=28.3673469387755, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24640549, Length=490, Percent_Identity=28.3673469387755, Blast_Score=129, Evalue=8e-30, Organism=Drosophila melanogaster, GI24639257, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI281359715, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI281359713, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24639250, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI18543267, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24639252, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 58399; Mature: 58268
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00076 PYRIDINE_REDOX_1 ; PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLKITGMTCDSCAAHVKEALEKVPGVFSAVVSYAKGTAQLATELGTSPDALTAAVAGL CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCC GYKATLADAPTAEKRGGLLDKARGWLSGGDKSVGDGGKLHIAVIGSGGAAMAAALKAAEQ CCEEEECCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHC GAKVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDDGIEATVPAIDRRELLA CCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH QQQARVDELRHAKYEGILDSNPAINVLQGEARFKDGQSLAVGLNDGGERAVVFDRCLVAT HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHC GASAAVPPIPGLKDTPYWTSIEALVSDTIPQRLAVIGSSVVAVELAQAFARLGSQVTILA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEE RSTLFFREDPAIGEAVTAAFRAEGIKVLEHTQASHVAYADGEFLLTTGHGEVRADKLLVA EEEEEEECCCCHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCEEEECCCCCEEECEEEEE TGRAPNTHSLALEAAGVTVNAQGAIVIDKFMRTSTPHVYAAGDCTDQPQFVYVAAAAGTR ECCCCCCCEEEEEECCEEEECCCCEEEEHHHHCCCCEEEECCCCCCCCCEEEEEECCCCE AAINMTGGEAAIDLSVMPAVVFTDPQVATVGYSEAQGHHDGIETDSRLLTLDNVPRALAN EEEEECCCCEEEEEEEECEEEECCCCEEEECCHHCCCCCCCCCCCCEEEEECCCCHHHHC FDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVE CCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLKLAAQTFSKDVTQLSCCAG HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLKITGMTCDSCAAHVKEALEKVPGVFSAVVSYAKGTAQLATELGTSPDALTAAVAGL CCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCC GYKATLADAPTAEKRGGLLDKARGWLSGGDKSVGDGGKLHIAVIGSGGAAMAAALKAAEQ CCEEEECCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHC GAKVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDDGIEATVPAIDRRELLA CCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH QQQARVDELRHAKYEGILDSNPAINVLQGEARFKDGQSLAVGLNDGGERAVVFDRCLVAT HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHC GASAAVPPIPGLKDTPYWTSIEALVSDTIPQRLAVIGSSVVAVELAQAFARLGSQVTILA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEE RSTLFFREDPAIGEAVTAAFRAEGIKVLEHTQASHVAYADGEFLLTTGHGEVRADKLLVA EEEEEEECCCCHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCEEEECCCCCEEECEEEEE TGRAPNTHSLALEAAGVTVNAQGAIVIDKFMRTSTPHVYAAGDCTDQPQFVYVAAAAGTR ECCCCCCCEEEEEECCEEEECCCCEEEEHHHHCCCCEEEECCCCCCCCCEEEEEECCCCE AAINMTGGEAAIDLSVMPAVVFTDPQVATVGYSEAQGHHDGIETDSRLLTLDNVPRALAN EEEEECCCCEEEEEEEECEEEECCCCEEEECCHHCCCCCCCCCCCCEEEEECCCCHHHHC FDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVE CCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLKLAAQTFSKDVTQLSCCAG HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8302940 [H]