| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788096
Identifier: 91788096
GI number: 91788096
Start: 2317008
End: 2317412
Strand: Reverse
Name: 91788096
Synonym: Bpro_2223
Alternate gene names: NA
Gene position: 2317412-2317008 (Counterclockwise)
Preceding gene: 91788097
Following gene: 91788095
Centisome position: 44.56
GC content: 59.01
Gene sequence:
>405_bases ATGCGCTTCGTCACGGTGAAGTCGGTCGAGCAACAGGATATACAGGCGGTCCATTGCGTGCGTACGCGAGCTGCTGGTCC AGCAGCGCACCGCGCTCAGTCAGTTCAGGGCTTGCCGGGGAAGCGAGGCGTGACGATTGCCAAGTCACCAGAGGCTTTCA AGCGTGCTGCGCCGCAGATTCTGGCCAATTGCGAAGGCAAGGTGACCAGCGTTTGCCAAGCCATGCTCTTGGAGTTGGTG CAGCAGATTCAGGAATTGGAACAACGCGTCAAGCGCGCTGAAGGCTGGATCAAAGCGTTCATGAAACGCTCGGCCCTGTG CAAGAAGATCTCCGCAATCGACGGCGTTGAGCCCATCTCCGCCACAGCGATGGTGTCCCTCGGGATCAAGCCGCCAATTT GCTGA
Upstream 100 bases:
>100_bases TCGAGTTCGGCGCGAATTTTCAGTCCGGCCTGGGTGGTCGTGTTGGCGATCAACTGAACGATCACCTCGTGACTGACCAA CGGTTGCCAGCCGGCCGGCG
Downstream 100 bases:
>100_bases GGACTGGGTGTGCAAATCTCATCGAGGCTGCGGGCGTGTGTGCACTTGCTCATTAGCAAGCCGTATACATGCATGCAAAC TGTTTCCAGTCACCAAAAAA
Product: putative transposase
Products: NA
Alternate protein names: Transposase For Insertion Sequence Element A
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC
Sequences:
>Translated_134_residues MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC >Mature_134_residues MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14506; Mature: 14506
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQI CCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH LANCEGKVTSVCQAMLLELVQQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPIS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ATAMVSLGIKPPIC HHHHHHCCCCCCCC >Mature Secondary Structure MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQI CCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH LANCEGKVTSVCQAMLLELVQQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPIS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ATAMVSLGIKPPIC HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA