Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788096

Identifier: 91788096

GI number: 91788096

Start: 2317008

End: 2317412

Strand: Reverse

Name: 91788096

Synonym: Bpro_2223

Alternate gene names: NA

Gene position: 2317412-2317008 (Counterclockwise)

Preceding gene: 91788097

Following gene: 91788095

Centisome position: 44.56

GC content: 59.01

Gene sequence:

>405_bases
ATGCGCTTCGTCACGGTGAAGTCGGTCGAGCAACAGGATATACAGGCGGTCCATTGCGTGCGTACGCGAGCTGCTGGTCC
AGCAGCGCACCGCGCTCAGTCAGTTCAGGGCTTGCCGGGGAAGCGAGGCGTGACGATTGCCAAGTCACCAGAGGCTTTCA
AGCGTGCTGCGCCGCAGATTCTGGCCAATTGCGAAGGCAAGGTGACCAGCGTTTGCCAAGCCATGCTCTTGGAGTTGGTG
CAGCAGATTCAGGAATTGGAACAACGCGTCAAGCGCGCTGAAGGCTGGATCAAAGCGTTCATGAAACGCTCGGCCCTGTG
CAAGAAGATCTCCGCAATCGACGGCGTTGAGCCCATCTCCGCCACAGCGATGGTGTCCCTCGGGATCAAGCCGCCAATTT
GCTGA

Upstream 100 bases:

>100_bases
TCGAGTTCGGCGCGAATTTTCAGTCCGGCCTGGGTGGTCGTGTTGGCGATCAACTGAACGATCACCTCGTGACTGACCAA
CGGTTGCCAGCCGGCCGGCG

Downstream 100 bases:

>100_bases
GGACTGGGTGTGCAAATCTCATCGAGGCTGCGGGCGTGTGTGCACTTGCTCATTAGCAAGCCGTATACATGCATGCAAAC
TGTTTCCAGTCACCAAAAAA

Product: putative transposase

Products: NA

Alternate protein names: Transposase For Insertion Sequence Element A

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV
QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC

Sequences:

>Translated_134_residues
MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV
QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC
>Mature_134_residues
MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQILANCEGKVTSVCQAMLLELV
QQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPISATAMVSLGIKPPIC

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14506; Mature: 14506

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQI
CCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH
LANCEGKVTSVCQAMLLELVQQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATAMVSLGIKPPIC
HHHHHHCCCCCCCC
>Mature Secondary Structure
MRFVTVKSVEQQDIQAVHCVRTRAAGPAAHRAQSVQGLPGKRGVTIAKSPEAFKRAAPQI
CCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH
LANCEGKVTSVCQAMLLELVQQIQELEQRVKRAEGWIKAFMKRSALCKKISAIDGVEPIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATAMVSLGIKPPIC
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA